Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_06g0019100 | OGI:06058410 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr06:20721676-20722540 | ||||||||
| Gene Symbol | MAK7 | ||||||||||
| DNA seq | gttaagctttctacaatagccactgcatccttctgttcagaggaagccaggatgagaatcccagcatcacgaaatggaaacacccctattaccacgttgtccggtatttccatcttcgtttccttcctaccatagcaagcaatttgtctaaaactacctgtcctttcatccttggattctcaccaccaatggtttgtgttcagtgaatgatctaaccatgcgtcattcacagttcttcgttcttgtctttactctcatgattttctctttgttccagacttgccaatccaaccatgagcatgtcgtttgctctgaatgctgagccaaacactgtgtggtataataaccgctccctcctccagaatacattttcagatgacaatttcttgatgcgcatcttcctccctcatgacattgcagttccaagtataaatgatagcatcgttccttcatttgcttgcgggttcttctgtgcaggatctgcaaccagctgtgatgcctacattttttccatcttctttgtctatgttagcaccgatttcagtcagcggctgcggtggcccgagatagtctggtttgccaaccgtgatcatccagttggagagaatgctactgttcaatttactgaacttggggatttagtgctctatgatgcagatggaacacttgtttggtccaccaatacagcgaacaagtctgttgtcagcatgaaccttacagggtcaggaaatctggtattgttagaccgcacaaatgtggaggtctggagatccttcgatcacccaactgacacgcttgtcatttctcagacactacagatgggtcagaagcttgtggcaagaacttcgtcgacaaactggactga
More
|
||||||||||
| CDS seq | atgagcatgtcgtttgctctgaatgctgagccaaacactgtgtggtataataaccgctccctcctccagaatacattttcagatgacaatttcttgatgcgcatcttcctccctcatgacattgcagttccaagtataaatgatagcatcgttccttcatttgcttgcgggttcttctgtgcaggatctgcaaccagctacactacagatgggtcagaagcttgtggcaagaacttcgtcgacaaactggactga |
||||||||||
| Protein seq | MSMSFALNAEPNTVWYNNRSLLQNTFSDDNFLMRIFLPHDIAVPSINDSIVPSFACGFFCAGSATSYTTDGSEACGKNFVDKLD |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_06g0019100 | OsCMeo_06g0019100.01 | Chr06 | 20721676 | 20722540 | + | NAM | ||
| CDS seq | atgagcatgtcgtttgctctgaatgctgagccaaacactgtgtggtataataaccgctccctcctccagaatacattttcagatgacaatttcttgatgcgcatcttcctccctcatgacattgcagttccaagtataaatgatagcatcgttccttcatttgcttgcgggttcttctgtgcaggatctgcaaccagctacactacagatgggtcagaagcttgtggcaagaacttcgtcgacaaactggactga
More
|
|||||||
| Protein seq | MSMSFALNAEPNTVWYNNRSLLQNTFSDDNFLMRIFLPHDIAVPSINDSIVPSFACGFFCAGSATSYTTDGSEACGKNFVDKLD |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 4.068362 | 1.208208 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0551800 | RBH | 0.0 | 0.0 | 0.207122 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0551800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0019170 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0019040 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0018930 | SBH | 0.017122 | 0.014162 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0331300 | SBH | 2.7055105 | 1.5466485 | 0.42264 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0305700 | SBH | 1.3460305 | 1.257383 | 3.4774315 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0019200 | RBH | 0.000000 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0019140 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0018790 | RBH | 3.381542 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0018980 | SBH | 0.113295 | 1.239130 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
