Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsCMeo_06g0018220 | OGI:06055110 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr06:19536419-19539725 | ||||||||
Gene Symbol | GELP84, OsGELP84 | ||||||||||
DNA seq | gctacacacaaagaaactctgtatcatatgttaaccactttgtgcaatacacctttttttactcataccacctcacctgatgaatgaacaaaatcatgctttaatttcagacctctctatctcaacttttcttttttacctgatcgcaacgaatcgaaggagatatacatacaactatatggaaacaacctttctgatccaatttgctgtgctattctgataccctagaggtacgatggacaaaacaactaggagctcaagaattctgtacgataggttgatccccgaatgggccatgcaaccaacctcgcgcgatatgtccatatgcggcctctgtcaagtgaataccatcccagctccagtgtgtcttggggtcggcacatgcagtggcaccaggctcaccgcatttggccgtcagattgaaattgtaaggtcccgtcccaggagcaccacagcatgctctaggcaattgtttgtaaaatcctggatttagagcaaaaaagtcaggtaccaactccctgtatccacttggacaagaaaaaaccataggtctatttcttggaataaatgcatatcctgcttatatgagcaaggatgtattccctccttatcaacatgaagtcaggacaaaatactatcactatcatgaatgtcatgaaaataaataataatttgatgaaatcagctcaagaaaataaaggacaaccatgctgctgttgccaataacacagagataataggaccatggacaaatatgtgcccatctattgatgtcccaaaacggtcagtataagattctccttccgacacagatatgtcaccaatatgtgcctcacttctctaatcattcagaatgcagtccaaaaaaatctttaagaatatcaggcccaccaagatgcaagcctttctcgagtagctagcagtatatgtaactttttctacaagaggggtaaaccactaaatccaagagatgagaagagccatgatatgaaaatactgctgggtcacaaactggtcagtcagctcagttagtgatggcctggtacttatagttcaagagattaagagcttcaggaagttttattcagaaatataaaaaaagaaggagtcagtaccagggtagaaatatattcgagagaagcatttgccatttctcaattcaagacggtgacttctaaatagtttaagttgaactatgaaaacactttacaggtccttacggttcttttgacaccaggttaaaattttctgttgcaaataatattgaggttaggattttgatgtagctcctagaaaagaccaactctggccataattttatatgtgttcaataacttaatcgctaaggtcaagatctgagctgcccaggttgtatgggcaaaataaacttttgatctcaaaagcaagactcatctgtggatgttgcccaagcttttgggagaacatggacaattaagaactgaaactgctagcaatatataatttcaaagtgccaaaacaataattaaaaaaaaaagcactacaagcaattgtgacatgtaaatttgagcagtgaataataccacttttggaagcagatcaggcccttcagagcatgatcaatcacagacaagacaccaaataatcaatacctagatctaagttttcaagctatagtttagcgcattgcacatctcaacagaacataagccggtaagtgtcgctgttgataaactgatgttgaataaggtacttcagaagtgttaggccactaacaaagctaattctcagtcgtatcagtcattagactaaaaattccctcccacagtagaagccaatcaaatcaacaaattggtattacaacattcattgccttactacaacaaaacataagggactgaggaactcaccaaacttttcgggctgaagcaagaattggacaaccggcgtgaaataatccccgtaaatgatcctcaccccaggatgcttggcacggagctttgctagcgctcgcttgagcatcgaattgtgcacccatgagaacgtattgaaccgcttcaggcaactgctacgcgaaccatacccctccttgggctctttgtacatggtcaagtacaccggaaagcaaccggatggcatcactccgggcacaatcaagtccctcgcgccctcggcaatcagttgctgcaatgtacatcagcaatcagagcaaagctccacacatcaagcactgtgaacaacagcaaagatgcaattgctacctcaacgccatcggatatgccctgaacgacatgaggcatcaaattgtaggcctccctgaggtccttccccgcgaagagcggcgcattgtagtcgttcccgccgaactcgccgacgacgaacagggacttggcgaagaaatccttgcaatctttggaaccaagagaagaggggggacaacatcaaagatcagaaatcaattactaacatccatagaacggaatgtggctagtcaaaagagaatcgtattcaccttgggtggagctgcagaaggagggcttgatgtcgcgcagccactggatttgggtgaagagggagccggagttccagaccgtcttgccgaggccgcgcctctcgaagaagtcggtgtcgagcgcggtggcgccggtgatggcgaagttggcgccccgcgcgaagctggcgttcttggccttggaagggggcagcagcggcaggccgaactcttgcgctggacgcgcgcggtggcaagaagaagaccgaatccgtcaaaatgctccgaggccaaggaggaggaatgcgggcggaaggaaaaagagaaggaagcgaatggttgataccgatgaagtcgacgacgaggcggccgtcggagcagcggccggtggggtagccgaagtaggtctggccgtagggcgggcgcgcggtggcgaggtagtccgggatgccgtccgtgaccaggttgccggcgtccaccagcgagtccccgaaattgaacaccgccctgtacttccccgcggcggacaccgcaagaacctgcagcgccgcagcaagaaccgccgccacccacgcgccggcgcctcctcgcctcctcggcctcgccatcgccgccgccgccgccgccgaagaagaagaagaagaagggtggtttgtgtgggcttcgttgccgtgggcgcgctggttctaggctctagctaggtgaggtttccgagggcgcggcggccttgtcgtgttcttgttgggtgggtcctcctcacatcacacgcgcgcggcgtctcgtatgggtggtggcgggagtgcggtgcggggggctgcgacggtggcggtggcgcat
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CDS seq | atgcgccaccgccaccgtcgcagccccccgcaccgcactcccgccaccacccatacgagacgccgcgcgcgtgtgatggcggtgttcaatttcggggactcgctggtggacgccggcaacctggtcacggacggcatcccggactacctcgccaccgcgcgcccgccctacggccagacctacttcggctaccccaccggccgctgctccgacggccgcctcgtcgtcgacttcatcgcgcaagagttcggcctgccgctgctgcccccttccaaggccaagaacgccagcttcgcgcggggcgccaacttcgccatcaccggcgccaccgcgctcgacaccgacttcttcgagaggcgcggcctcggcaagacggtctggaactccggctccctcttcacccaaatccagtggctgcgcgacatcaagccctccttctgcagctccacccaagattgcaaggatttcttcgccaagtccctgttcgtcgtcggcgagttcggcgggaacgactacaatgcgccgctcttcgcggggaaggacctcagggaggcctacaatttgatgcctcatgtcgttcagggcatatccgatggcgttgagcaactgattgccgagggcgcgagggacttgattgtgcccggagtgatgccatccggttgctttccggtgtacttgaccatgtacaaagagcccaaggaggggtatggttcgcgtagcagttgcctgaagcggttcaatacgttctcatgggtgcacaattcgatgctcaagcgagcgctagcaaagctccgtgccaagcatcctggggtgaggatcatttacggggattatttcacgccggttgtccaattcttgcttcagcccgaaaagtttggattttacaaacaattgcctagagcatgctgtggtgctcctgggacgggaccttacaatttcaatctgacggccaaatgcggtgagcctggtgccactgcatgtgccgaccccaagacacactggagctgggatggtattcacttgacagaggccgcatatggacatatcgcgcgaggttggttgcatggcccattcggggatcaacctatcgtacagaattcttga
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Protein seq | MRHRHRRSPPHRTPATTHTRRRARVMAVFNFGDSLVDAGNLVTDGIPDYLATARPPYGQTYFGYPTGRCSDGRLVVDFIAQEFGLPLLPPSKAKNASFARGANFAITGATALDTDFFERRGLGKTVWNSGSLFTQIQWLRDIKPSFCSSTQDCKDFFAKSLFVVGEFGGNDYNAPLFAGKDLREAYNLMPHVVQGISDGVEQLIAEGARDLIVPGVMPSGCFPVYLTMYKEPKEGYGSRSSCLKRFNTFSWVHNSMLKRALAKLRAKHPGVRIIYGDYFTPVVQFLLQPEKFGFYKQLPRACCGAPGTGPYNFNLTAKCGEPGATACADPKTHWSWDGIHLTEAAYGHIARGWLHGPFGDQPIVQNS |
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Function | GDSL esterase/lipase At5g45910 [UniProtKB/Swiss-Prot:Q9FJ45] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsCMeo_06g0018220 | OsCMeo_06g0018220.01 | Chr06 | 19536419 | 19539725 | - | NAM | ||
CDS seq | atgcgccaccgccaccgtcgcagccccccgcaccgcactcccgccaccacccatacgagacgccgcgcgcgtgtgatggcggtgttcaatttcggggactcgctggtggacgccggcaacctggtcacggacggcatcccggactacctcgccaccgcgcgcccgccctacggccagacctacttcggctaccccaccggccgctgctccgacggccgcctcgtcgtcgacttcatcgcgcaagagttcggcctgccgctgctgcccccttccaaggccaagaacgccagcttcgcgcggggcgccaacttcgccatcaccggcgccaccgcgctcgacaccgacttcttcgagaggcgcggcctcggcaagacggtctggaactccggctccctcttcacccaaatccagtggctgcgcgacatcaagccctccttctgcagctccacccaagattgcaaggatttcttcgccaagtccctgttcgtcgtcggcgagttcggcgggaacgactacaatgcgccgctcttcgcggggaaggacctcagggaggcctacaatttgatgcctcatgtcgttcagggcatatccgatggcgttgagcaactgattgccgagggcgcgagggacttgattgtgcccggagtgatgccatccggttgctttccggtgtacttgaccatgtacaaagagcccaaggaggggtatggttcgcgtagcagttgcctgaagcggttcaatacgttctcatgggtgcacaattcgatgctcaagcgagcgctagcaaagctccgtgccaagcatcctggggtgaggatcatttacggggattatttcacgccggttgtccaattcttgcttcagcccgaaaagtttggattttacaaacaattgcctagagcatgctgtggtgctcctgggacgggaccttacaatttcaatctgacggccaaatgcggtgagcctggtgccactgcatgtgccgaccccaagacacactggagctgggatggtattcacttgacagaggccgcatatggacatatcgcgcgaggttggttgcatggcccattcggggatcaacctatcgtacagaattcttga
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Protein seq | MRHRHRRSPPHRTPATTHTRRRARVMAVFNFGDSLVDAGNLVTDGIPDYLATARPPYGQTYFGYPTGRCSDGRLVVDFIAQEFGLPLLPPSKAKNASFARGANFAITGATALDTDFFERRGLGKTVWNSGSLFTQIQWLRDIKPSFCSSTQDCKDFFAKSLFVVGEFGGNDYNAPLFAGKDLREAYNLMPHVVQGISDGVEQLIAEGARDLIVPGVMPSGCFPVYLTMYKEPKEGYGSRSSCLKRFNTFSWVHNSMLKRALAKLRAKHPGVRIIYGDYFTPVVQFLLQPEKFGFYKQLPRACCGAPGTGPYNFNLTAKCGEPGATACADPKTHWSWDGIHLTEAAYGHIARGWLHGPFGDQPIVQNS
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 1.512234 | 0.000000 | 2.248872 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0531600 | RBH | 0.750406 | 0.557784 | 1.830300 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g34070 | RBH | 0.090319 | 0.293886 | 0.335841 |
Nipponbare | IRGSP 1.0 | RAP-db | Os06g0531600 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0018290 | RBH | 0.266743 | 0.0 | 2.917266 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0018120 | RBH | 0.343481 | 0.0 | 0.873884 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0010760 | RBH | 3.006567 | 81.144157 | 22.816162 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0018070 | RBH | 0.0 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0018460 | RBH | 0.000000 | 3.771753 | 1.237153 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0311500 | RBH | 12.5256425 | 1.9341305 | 4.286389 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0017940 | RBH | 0.264886 | 0.000000 | 0.469973 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0287300 | RBH | 12.503276 | 2.7707285 | 4.5106925 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0018340 | RBH | 0.055675 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0018320 | RBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0017960 | RBH | 0.0 | 0.000000 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0018680 | RBH | 0.880099 | 0.000000 | 0.000000 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0018120 | RBH | 1.135098 | 0.0 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G018050 | RBH | 0.000000 | 0.0 | 0.629433 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0018200 | RBH | 0.000000 | 0.000000 | 2.722752 |