Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_04g0023990 | OGI:04085110 | 10/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr04:28584401-28589730 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | gtcaaaaatataaataagtaaacagcccatgcgtccaataataaatgtacatctctcaacataaagtcgttttggaattctagacattgtttatgttttcttctatgcctgtcattctcaaaaaacaagaatgctatccctctcacaaataaaatttgtcgtctttttcaagatagtatacatgaagggcatgagagttattttctcaagtcttgtgcataagcctaaaattgacttatatttggaaccatttgagcatgttttctttatattgttgatactggccattgtaaatagcatttgtagtattttcggatgctgatggagttaggccttgttaatgtctctggataactttgatccgatagccatcaggaaattctagtcctggagttcggactaccctgcttgctcccagcggtatccacctgaaaaagaaaagcgcaattatttcatctccttcgctctcgtttgcgagaccaaaaatttcagccatcgctgttccgaaatgttacttcaattggttggcacatcacagagatatgggatgacaaggatttggacttccccaaatatgccctcaagttggactgcgaaagagaaaaacactacctgtattttgtcacaaggaaatggaggaaaatagccaattgtagcttgctgaagtctgctccaacgcagaaccgtagtcctccgccgaatgccatgaagtgttttgatccacggtttatctctggtttatcctgcatgttacactcaagctgattaaaattttcttttagtggaaagctaactaaatatacccgaatgaatagatatttttgtgtctgtatagggggagacgggcttggccggggtacgtgttactccatccgtttcaagttacaagactttctaacattatccatatatatatatatatatatatatatatatatatatatatatgtctagattcattaacatagatatgaatgtgggcaatgctataaagtcttataatatgaaacggagaaagtagatctttcatgagtttattttttgttttttttaacttgtgggagatatgtttcataaaaaaaatgagtggaaaatcaggattatcaaaccttaaaccttgaagggatgaaggtgagaggatccggataaatatatggatttaagtgcactgctggtggacagaccatcactccccatcctgctggaattgtgtatcctgtcaccaatggatgtcacttaggaaaagaagaatggtattcagttatgctttttttaaaagtaaatttcacaaaactatagatactttggtcaaattatcacaattaagtaatgtatcacagaactacaaatttaactataaatttatcacaaaactacagatttaaggctaagtatcacaaaactacatattgaataataaaattatcacaaaactacatattttagggtttaaattcttagcactagtgttatgttggacttataattgttcaagttttgtgattaaattgtcattaaatatgtagttttgtgataattttgttactaaatacgtagttttgtgatatttcaccataaatctatagttttgtgataaatttagtactaaatctgtagttttgtgataaatttagtactaaatctgtagttttgtgacacgtcatgttaaatctgtagttttctgataatttgatcaaaatacttgtagttttgtgaaatttactcttttttaaccggatgcatgatgtactgactcgttagcaaggtttcaacatgtgacatagtaatctggagatggattctaatatatcgctcaataaacatgcgagttcaaaagtgacttttgtagtttgtaaaaaaataacaaaattaattgtgaatatagatatactatttaaattttgatttgctatttttattacaacttgtaaaaatcaaatttgaacttgtatatttgtagagtgccatattatacatgaatctatcttatcaaaaaatttgatttttttttcataacaatttaattagcatgcaacaaatcggtggatatctagctaagtgatcaaaactgtttcaactgaccacgttaaaaaaagctcaaactaatttttttagcaaattttgcctgaatatcacatgttttcatcgataactagcatggtggcccccgcagattgcgcggctagcattattatattttctctcatataatactacatatattttctcaatttgttattaaaatatattagaatgacaacatattttaaattttatattaactttaccaaactactaatttgtaatattcatattttattgtatatacatgatagttactaatatcaaattttagttatttctgaattgtatttctatatggactctatactcgcctttcaatatttcttttttttaattccgaatttttgttatttgcaaattgtattttttatatagactctaggctattcttttaatattatttatctttaattctgaattttcattatttctaatagtatttctatgtggactctaaactcatctttcaatattctttatttttttaatttcgaatttcaattacttcaaaattgtatttctatatggactttaggctcttcttcccatgtgttttaaatttcgaattttagttatttgtaaattatattgctatatggactctaaactctatttgtaattttattatttttattcccaattttagttagttctaaattcctatatggactctatgctcttctactgttccttattttttaattccgaatttttattatttcttaattgtatttctatatggactatatactcttcttctaatattccttatatttaattctaaatttcagttatttctaaattgtatttctatatggactctatactcttctttctgtattttttttaattttgaattttagttatttctaaactgtatttctatatggactctaacctgatttttattttttttattttttatttcgaattacaattagttctaaattgtatactggcatgaactctaatctactcttccaatatgcggatttgctcatattgttttcttgcccaggcattgctgcagaagagtgaaatgaaaaacttattccttattttttaattctgaatttcagctatttctaaactgtatttttatatagactctaacctaattttaattttcttttttttaattccgaatttccattagttctaaattgtataccggcatggactctagtctattctttcaatattcctttttattaatttcgaatttcaggtatttctaaattgtatttctacgtggactctgtttttctttttctccgattaatatgagaatttctatgccgtgagagcgaacgtggaggctcatttttctattactttaaataagttggagtaatagatagattgggttattcaatgactggtcgcatttgtaagccttgctagctcatcaatcatactcctacctcattattaaatagcagcatcaagatatgattttggacccatgatcaacagattgtggggggctcaccattgaaccgtatgtctttaagtgcctttctgaagatgacaggagcgatgttggccaaacggaccgtctcgtttatgacctacataataggagcatgtgcgcgtatgattggtttagcaacgcacgttttgatacaaaacatgcatggggtgctataattggatccaatgcaatcagtagcataaactgttgcacagcaaattctgaaccctatctgatcgatatttatctagcagttttgtgcgagctagtactagtaactaacctgagatgtgaatgccatggatttgtactccttccatgtgattctatctagctcgctgcctgcctcacggtccttcagaatcgtttcatgctccacctgcgtacgtacatatccgtgtatgtcagtacatagtcataaacgtgtatgtcagtatatcacatcttgatttttgcgtatagtataggagcactcaccgtgagctcctccaggacgagagggtggtcggcgagcagcttgacggccagggtgagcgccagcgacgtcgtgtggaagctggcgaagaggagcacgaacatcaggtcgagcgccatcttctctgtcatgaccggcttttccttcgtgatctcctggatcacataatccaggaagtcgccgtgctgctgcgcttctcctcctcgctgcaatcctgtcgattgcttcctctcctccagaacttgctctagcaccaccatcgcgcgcctccgcccctgacaagagtctcaaaaccaagagaccatgtctgaaactttgcgaagaacgactaattagtgcaatatcgtgacgacataagttttacctgcatgcatgagtagtaagctgtccctggcagatacagcgggaaggagatgagccctcgaacgaagtcgaagaagctcttccgcaaaatctttgacctcgacggctccaggccgagcagcttgcttgcagcaagatcgaacaccatctgcgcaagtgcatgcactcgaacggaacatacatcacaatgagacagtacaagaaaccaacattctaaaatctgggtagaaaccgcgtacgtacagtggagacggcttctttgagctcgacggccggcaaggtggaccaggtgcagagggagctggagacggcgcgctcgacgtcgcggatgatgccttccttgaggctctcggggccgaagtacctgagcaccatgttcttgaggtacctgaacatggcgccctgctgctccccgacgttgtccttccccaggatctccacgaacgagtccgggtaccagctctggaacagctgcccctcctgctggaacaccatgtggttcagctcctcgtcggccgacaccaccaccgggtgccccaccaggctggtcttgaatatcggcccatatctgaacttgcagcccaaactagtaaaaaaacagcaaaagaaacccagcccgttctctggcccattaacaaaggcgtacctagccagcctgtgccggatgaagggagggatgtccaaggaggcgtcggaggagaagaactggaacgtctcgccaacgagcgggaggcccatggagcccggcgggagttggccgccgcagcgagggttcctccacctgcgcgcctggtgccgcagcagcagcagcagcacgagcgcagctgcgccgcccacgagccccacgtaggcgtacatctgcacgcgtgtaatatgcgctagtggcagtatctgcttctgttgatctacatgtgccgtcgtcgaaagcaaagc
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| CDS seq | atgtacgcctacgtggggctcgtgggcggcgcagctgcgctcgtgctgctgctgctgctgcggcaccaggcgcgcaggtggaggaaccctcgctgcggcggccaactcccgccgggctccatgggcctcccgctcgttggcgagacgttccagttcttctcctccgacgcctccttggacatccctcccttcatccggcacaggctggctagatatgggccgatattcaagaccagcctggtggggcacccggtggtggtgtcggccgacgaggagctgaaccacatggtgttccagcaggaggggcagctgttccagagctggtacccggactcgttcgtggagatcctggggaaggacaacgtcggggagcagcagggcgccatgttcaggtacctcaagaacatggtgctcaggtacttcggccccgagagcctcaaggaaggcatcatccgcgacgtcgagcgcgccgtctccagctccctctgcacctggtccaccttgccggccgtcgagctcaaagaagccgtctccactatggtgttcgatcttgctgcaagcaagctgctcggcctggagccgtcgaggtcaaagattttgcggaagagcttcttcgacttcgttcgagggctcatctccttcccgctgtatctgccagggacagcttactactcatgcatgcaggggcggaggcgcgcgatggtggtgctagagcaagttctggaggagaggaagcaatcgacaggattgcagcgaggaggagaagcgcagcagcacggcgacttcctggattatgtgatccaggagatcacgaaggaaaagccggtcatgacagagaagatggcgctcgacctgatgttcgtgctcctcttcgccagcttccacacgacgtcgctggcgctcaccctggccgtcaagctgctcgccgaccaccctctcgtcctggaggagctcacggtggagcatgaaacgattctgaaggaccgtgaggcaggcagcgagctagatagaatcacatggaaggagtacaaatccatggcattcacatctcaggtcataaacgagacggtccgtttggccaacatcgctcctgtcatcttcagaaaggcacttaaagacatacggttcaatgagataaaccgtggatcaaaacacttcatggcattcggcggaggactacggttctgcgttggagcagacttcagcaagctacaattggctattttcctccatttccttgtgacaaaatacaggtggataccgctgggagcaagcagggtagtccgaactccaggactagaatttcctgatggctatcggatcaaagttatccagagacattaa
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| Protein seq | MYAYVGLVGGAAALVLLLLLRHQARRWRNPRCGGQLPPGSMGLPLVGETFQFFSSDASLDIPPFIRHRLARYGPIFKTSLVGHPVVVSADEELNHMVFQQEGQLFQSWYPDSFVEILGKDNVGEQQGAMFRYLKNMVLRYFGPESLKEGIIRDVERAVSSSLCTWSTLPAVELKEAVSTMVFDLAASKLLGLEPSRSKILRKSFFDFVRGLISFPLYLPGTAYYSCMQGRRRAMVVLEQVLEERKQSTGLQRGGEAQQHGDFLDYVIQEITKEKPVMTEKMALDLMFVLLFASFHTTSLALTLAVKLLADHPLVLEELTVEHETILKDREAGSELDRITWKEYKSMAFTSQVINETVRLANIAPVIFRKALKDIRFNEINRGSKHFMAFGGGLRFCVGADFSKLQLAIFLHFLVTKYRWIPLGASRVVRTPGLEFPDGYRIKVIQRH |
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| Function | Cytochrome P450 87A3 [UniProtKB/Swiss-Prot:Q7XU38] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_04g0023990 | OsCMeo_04g0023990.01 | Chr04 | 28584437 | 28589730 | - | NAM | ||
| CDS seq | atgtacgcctacgtggggctcgtgggcggcgcagctgcgctcgtgctgctgctgctgctgcggcaccaggcgcgcaggtggaggaaccctcgctgcggcggccaactcccgccgggctccatgggcctcccgctcgttggcgagacgttccagttcttctcctccgacgcctccttggacatccctcccttcatccggcacaggctggctagatatgggccgatattcaagaccagcctggtggggcacccggtggtggtgtcggccgacgaggagctgaaccacatggtgttccagcaggaggggcagctgttccagagctggtacccggactcgttcgtggagatcctggggaaggacaacgtcggggagcagcagggcgccatgttcaggtacctcaagaacatggtgctcaggtacttcggccccgagagcctcaaggaaggcatcatccgcgacgtcgagcgcgccgtctccagctccctctgcacctggtccaccttgccggccgtcgagctcaaagaagccgtctccactatggtgttcgatcttgctgcaagcaagctgctcggcctggagccgtcgaggtcaaagattttgcggaagagcttcttcgacttcgttcgagggctcatctccttcccgctgtatctgccagggacagcttactactcatgcatgcaggggcggaggcgcgcgatggtggtgctagagcaagttctggaggagaggaagcaatcgacaggattgcagcgaggaggagaagcgcagcagcacggcgacttcctggattatgtgatccaggagatcacgaaggaaaagccggtcatgacagagaagatggcgctcgacctgatgttcgtgctcctcttcgccagcttccacacgacgtcgctggcgctcaccctggccgtcaagctgctcgccgaccaccctctcgtcctggaggagctcacggtggagcatgaaacgattctgaaggaccgtgaggcaggcagcgagctagatagaatcacatggaaggagtacaaatccatggcattcacatctcaggtcataaacgagacggtccgtttggccaacatcgctcctgtcatcttcagaaaggcacttaaagacatacggttcaatgagataaaccgtggatcaaaacacttcatggcattcggcggaggactacggttctgcgttggagcagacttcagcaagctacaattggctattttcctccatttccttgtgacaaaatacaggtggataccgctgggagcaagcagggtagtccgaactccaggactagaatttcctgatggctatcggatcaaagttatccagagacattaa
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| Protein seq | MYAYVGLVGGAAALVLLLLLRHQARRWRNPRCGGQLPPGSMGLPLVGETFQFFSSDASLDIPPFIRHRLARYGPIFKTSLVGHPVVVSADEELNHMVFQQEGQLFQSWYPDSFVEILGKDNVGEQQGAMFRYLKNMVLRYFGPESLKEGIIRDVERAVSSSLCTWSTLPAVELKEAVSTMVFDLAASKLLGLEPSRSKILRKSFFDFVRGLISFPLYLPGTAYYSCMQGRRRAMVVLEQVLEERKQSTGLQRGGEAQQHGDFLDYVIQEITKEKPVMTEKMALDLMFVLLFASFHTTSLALTLAVKLLADHPLVLEELTVEHETILKDREAGSELDRITWKEYKSMAFTSQVINETVRLANIAPVIFRKALKDIRFNEINRGSKHFMAFGGGLRFCVGADFSKLQLAIFLHFLVTKYRWIPLGASRVVRTPGLEFPDGYRIKVIQRH
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_04g0023990 | OsCMeo_04g0023990.02 | Chr04 | 28584401 | 28589729 | - | IsoSeq | ||
| CDS seq | atgcatgcaggggcggaggcgcgcgatggtggtgctagagcaagttctggaggagaggaagcaatcgacaggattgcagcgaggaggagaagcgcagcagcacggcgacttcctggattatgtgatccaggagatcacgaaggaaaagccggtcatgacagagaagatggcgctcgacctgatgttcgtgctcctcttcgccagcttccacacgacgtcgctggcgctcaccctggccgtcaagctgctcgccgaccaccctctcgtcctggaggagctcacggtgga
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| Protein seq | MHAGAEARDGGARASSGGEEAIDRIAARRRSAAARRLPGLCDPGDHEGKAGHDREDGARPDVRAPLRQLPHDVAGAHPGRQAARRPPSRPGGAHGG |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 10.825400 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0570600 | RBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g48210 | RBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0570600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0023520 | RBH | 0.0 | 0.0 | 2.037433 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0024260 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0028700 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0023740 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0023870 | SBH | 0.0 | 0.0 | 5.113295 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0449900 | SBH | 0.815468 | 0.0396325 | 0.374478 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0022640 | SBH | 0.0 | 0.0 | 0.033752 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0453700 | SBH | 1.103369 | 0.005544 | 0.012879 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0023140 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0022970 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0023090 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0023500 | RBH | 0.0 | 0.0 | 0.077800 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0023690 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G022940 | RBH | 0.0 | 0.0 | 5.763032 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0022840 | SBH | 0.0 | 0.0 | 1.072739 |
