Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_04g0012940 | OGI:04063280 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr04:20059107-20064158 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | agaggcggcgtggcaggaaaggactcaagaagacttatattgtgtaagtccagaaatagtttcggcctatcgtcatatgtgtagaatatgttataggaatgatgagttcttgttgtacataagtacatttttgaagatggaaacctaatctcacatttttgtcatttcatggccccagtttagtcactgtctcactgatctagctagctctgggtcgtgtggtaagtagtactaactgaagtactcaacctatttctggaggcttcttgatgatcacatcaacatggtgatttactgcagtaatgaattcatcataatattcacaacgcaacacagctataagcaacagaacagagtgccttacggtcatcaacgaaagcacacaatggtgtacattccgtcggcaacggaggcctatattgtgcggtcactactagtcagtactcagtactcagtagcaataaacagaaaatgcacacacatagctgttgaatccgtgctgcccaactttatggtattggcaaggaataaagttacgcaagttattacccgccttcactcgggctggtagtacttcccagacttaacaagtgacagccaattccagatgccactgaggcaatatgcaaatgcaatacaacatgttctacttctatcattgcactcgtacaagatgactgccgaagccgtgctaatctggtattttgatggtattaacaaggaataaagtagtagcaggtttaacagccgaacatacttcacttccccaacattggcaggtgacacaagattttactcatttccaacagaaagctgcagggaagtgaaactacctctagctacatgctatggatgttcttccgaatacaaagtagtattattaccaccactagaagagctcaaactcaatgtcgtctccattcagcctgaactccaggcacttgccttccttcttcttccgtgccgtcgtgaggcttgccgcgtcgaagcttttcggagtctcaggcggtgcagtccatcggatcaatgcccagttcaggccttcgaagaagggatgccgcttgatctcagcagctcctttcgttgagcctagccggtactccggatccttcacaagcaaccctctgatcaaatcccgggcatggaagctgacagcagggttatcagggaacttcagcccctgcgagaccacatttgtcagtgtctcctcattgccgggtcccctgaacggtgtcctgccatagagtaattcatagagaaagatgccaagagtccaccagtcgaccgagctaccatggccatctcctctgataatctctggtgcaagatattcatgggtaccgacgaacgaatttgaccttgcatcagttggctcaacaacaagctgtggcagtgatggtttcttctgaggctcacccctcggccgccgtggcctggaaggggtagaggaaactagccgaggcgtgaagcaagaagaattggcccatgacggttggatacagagtggatcaatgcagctttccgcacaagggccagaaggtctactaggttcatctcttcctactgatgaggcccttacaagcattggatttactgagcacctcagggacagatcgaaatcagagagcataatgtgcccatcttcacgaacaagtatgttttctggtttcagatcgcgatatatgacccccaacatatgtagatattccaatgctaggagaacttcagcaacataaaacctgcaaaataaaaaggtaattctccctgtgagttacatcgctcaaagaacatacaccaattgatcagttaaaaacatcaatcagatggcagcaagcaagactgtatcagtgtctgttaaatgagactatagctcggttagtgtgaagcagccacatggcaatctcatgtatgttaggacatcaaatgaaaacacgattaatagaacttaagttccatacctagcagcagcttctgaaaaggtcctggtaggctgtttctgtcgtagaacatgcaggtcaccgccagggcaatactccatgactaggcaagacagattatcggtcgtgaaaaaagaatacagagttggaagaaatgggtggtcgagcatttgcaggatctccctctcagtttgtgctcgaagcatcttctttctacttatcaggtactcgatatccataactttcaatgcgaacatgcattcagaacccaccaattcagctagataaacagtcccaatatctccacaaccaagttgtttgagaagcttgaagttcttcagtcccaggctcccttgttggattgccatgcgcctaatggccccccatctcacatcttttgacatgtgaggcctgcagccattgccactgaaactaccataactatcatcgcttatgcttgtgctggtgctataatcacccatgctgctctttgagctttgggagcattcacccttttccttcgatcttgacaactcactgggctttgaaccatggatctcaccaacaccacatcctttggtgccacaattagctccatcagtgctgatagagctagccgcagccttcttgttgattggtgttggagttctgggttcatcctgtagggcctcgtgcttcttattagcttgagaattggaactttttgcctcacaagtcttgtgagataccactgcagcagctggttctggtttgaccttcttcttggtggaggttttactccggaacaccaggcgtgaaccgcccacaggaactgcacgggggctagatgttttcattttgccctttctctgtttagccaccgcaggacctgcaggcaaatcttcacttgcctcagatgacttattactgatcacatcttggattctggttttctggacctttgttgtggttggagatgctgaacgcacatttttcttagctgggcttttgttccgtaccttgttcttggcttccgttgacttcaccgatgaacttattacatccttctcaggcaaaacggacacttttccaaacttattcttttcatcccgctccttgttggtttgaaccacaacagatgtataaagcttcttaattgccccagcttctggggtatttgacaccgccgtcggcttcggcatcctcttcatggcggccatctccgacgcctgcgagatgcacatcttcctcagggcctgtttcaggctcacagactcaacaatctccgagctcgatatcggcgacttcccgagcgcgataagcctcctatccgtgctcgtctgcccagaagcccgtgcggatgtgcgcacattaatcgatctaatgagcctatcgagatcatcctcgacggagcacgaccgcgctccatgctcctgacccaccggcttcactctcaccctcaggtgggtgacaccaccaggacgggcatccttcgactcatccaccaattcgactatctctgagcaacctgaagaacccatctttctcaaaagccctctgctgcctccggagctgcgcctagtagagcattaactcatgcggcctcacaactaacaaccgcatctggggaggccatccaaccgctgacgcagctcaggttaggaccagtggttgcctgcagttcggtgaccaaagaggcagctttcctggatcaagaagcggcatcacggggccctgcaagaaaatcaagcacaaactggatcagatagagcaaaaaacccatctttgctcagggaaaaaaaacttagcaatatacaacaaggagtaagattaacactaacgagaatggagaaaaagcagcaaccaaatcaagtgaatctgcagcttgaaccagagccaatctcggtgccctcctcctcaaaatctccccccacagctctccttttccccacccaagagtagaaatttgaaaaacacaaaagaaagaaagcaaaaggaacacagatgcggtaggtgaggtggggttttgctctatccccagcaaaatgatgcgagatccgttaacccctggaggcaaaagcaagaagaggacacaagcagctcagccaaaaccaccccaaaacttagggccagccaaaaacaccagcatacaaaaaagaaggggaaaatgaagaaaaagaacaaagatttgtgcctattagatgcggggttttgccctggagaaacttaccggcaggagaaccgcggtggcggcggcgacgggactagggtttagctggagcgccgccgacgagtaggacaaggaggcggagctggagagagagaagggaagaaatgttgggttttcctttggagaagagttgaaacggagagagctcagcttcagcagcagcaatgcgcgcacatcacgaggagcaaagaggaagacgaaatgagagcggctgcctctgcctctcccctcactcactcacgcctacacctatgccctacaaacttctgtcacacacacacacacaaacctatccttgctctaccattctctctctaccacggtgaccaccgcaaaccgataaaggccccaccgggggcaccaccacccctcccaaggattttacgcttctttatttattgggtcacatttattaatatctgtagccacgtatcgcgtgctgctactgctgtgcccctcctctcccctttcacgtctctctcctcgcccttttcatgtctctttctctctctccagactaccgagcttttctctctctcttttttttttctttttatcttgttttgtcacccacaaccctgatgaagaaaagggcaaaaagaaacgaacggaacggaacggcacggcccgtagataaaacaattcatctacgaggagatagtaggagtagagtggtagaggctgctgtgtctggctatgctccgcctgcggacaccggacagaaagggcatcaaagaattcacggttccccgtactacgatttcgatttcgatttcgatttcgccctaacctcagcgcgcgcgtggcccgcagcgtcagcggcgcattatcctgccgcggcaacatggctggagtaatcaccggggcgctgcgcgtaacgtgatgagtggttttggccaagctcat
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| CDS seq | atgggttcttcaggttgctcagagatagtcgaattggtggatgagtcgaaggatgcccgtcctggtggtgtcacccacctgagggtgagagtgaagccggtgggtcaggagcatggagcgcggtcgtgctccgtcgaggatgatctcgataggctcattagatcgattaatgtgcgcacatccgcacgggcttctgggcagacgagcacggataggaggcttatcgcgctcgggaagtcgccgatatcgagctcggagattgttgagtctgtgagcctgaaacaggccctgaggaagatgtgcatctcgcaggcgtcggagatggccgccatgaagaggatgccgaagccgacggcggtgtcaaataccccagaagctggggcaattaagaagctttatacatctgttgtggttcaaaccaacaaggagcgggatgaaaagaataagtttggaaaagtgtccgttttgcctgagaaggatgtaataagttcatcggtgaagtcaacggaagccaagaacaaggtacggaacaaaagcccagctaagaaaaatgtgcgttcagcatctccaaccacaacaaaggtccagaaaaccagaatccaagatgtgatcagtaataagtcatctgaggcaagtgaagatttgcctgcaggtcctgcggtggctaaacagagaaagggcaaaatgaaaacatctagcccccgtgcagttcctgtgggcggttcacgcctggtgttccggagtaaaacctccaccaagaagaaggtcaaaccagaaccagctgctgcagtggtatctcacaagacttgtgaggcaaaaagttccaattctcaagctaataagaagcacgaggccctacaggatgaacccagaactccaacaccaatcaacaagaaggctgcggctagctctatcagcactgatggagctaattgtggcaccaaaggatgtggtgttggtgagatccatggttcaaagcccagtgagttgtcaagatcgaaggaaaagggtgaatgctcccaaagctcaaagagcagcatgggtgattatagcaccagcacaagcataagcgatgatagttatggtagtttcagtggcaatggctgcaggcctcacatgtcaaaagatgtgagatggggggccattaggcgcatggcaatccaacaagggagcctgggactgaagaacttcaagcttctcaaacaacttggttgtggagatattgggactgtttatctagctgaattggtgggttctgaatgcatgttcgcattgaaagttatggatatcgagtacctgataagtagaaagaagatgcttcgagcacaaactgagagggagatcctgcaaatgctcgaccacccatttcttccaactctgtattcttttttcacgaccgataatctgtcttgcctagtcatggagtattgccctggcggtgacctgcatgttctacgacagaaacagcctaccaggaccttttcagaagctgctgctaggttttatgttgctgaagttctcctagcattggaatatctacatatgttgggggtcatatatcgcgatctgaaaccagaaaacatacttgttcgtgaagatgggcacattatgctctctgatttcgatctgtccctgaggtgctcagtaaatccaatgcttgtaagggcctcatcagtaggaagagatgaacctagtagaccttctggcccttgtgcggaaagctgcattgatccactctgtatccaaccgtcatgggccaattcttcttgcttcacgcctcggctagtttcctctaccccttccaggccacggcggccgaggggtgagcctcagaagaaaccatcactgccacagcttgttgttgagccaactgatgcaaggtcaaattcgttcgtcggtacccatgaatatcttgcaccagagattatcagaggagatggccatggtagctcggtcgactggtggactcttggcatctttctctatgaattactctatggcaggacaccgttcaggggacccggcaatgaggagacactgacaaatgtggtctcgcaggggctgaagttccctgataaccctgctgtcagcttccatgcccgggatttgatcagagggttgcttgtgaaggatccggagtaccggctaggctcaacgaaaggagctgctgagatcaagcggcatcccttcttcgaaggcctgaactgggcattgatccgatggactgcaccgcctgagactccgaaaagcttcgacgcggcaagcctcacgacggcacggaagaagaaggaaggcaagtgcctggagttcaggctgaatggagacgacattgagtttgagctcttctag
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| Protein seq | MGSSGCSEIVELVDESKDARPGGVTHLRVRVKPVGQEHGARSCSVEDDLDRLIRSINVRTSARASGQTSTDRRLIALGKSPISSSEIVESVSLKQALRKMCISQASEMAAMKRMPKPTAVSNTPEAGAIKKLYTSVVVQTNKERDEKNKFGKVSVLPEKDVISSSVKSTEAKNKVRNKSPAKKNVRSASPTTTKVQKTRIQDVISNKSSEASEDLPAGPAVAKQRKGKMKTSSPRAVPVGGSRLVFRSKTSTKKKVKPEPAAAVVSHKTCEAKSSNSQANKKHEALQDEPRTPTPINKKAAASSISTDGANCGTKGCGVGEIHGSKPSELSRSKEKGECSQSSKSSMGDYSTSTSISDDSYGSFSGNGCRPHMSKDVRWGAIRRMAIQQGSLGLKNFKLLKQLGCGDIGTVYLAELVGSECMFALKVMDIEYLISRKKMLRAQTEREILQMLDHPFLPTLYSFFTTDNLSCLVMEYCPGGDLHVLRQKQPTRTFSEAAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLSDFDLSLRCSVNPMLVRASSVGRDEPSRPSGPCAESCIDPLCIQPSWANSSCFTPRLVSSTPSRPRRPRGEPQKKPSLPQLVVEPTDARSNSFVGTHEYLAPEIIRGDGHGSSVDWWTLGIFLYELLYGRTPFRGPGNEETLTNVVSQGLKFPDNPAVSFHARDLIRGLLVKDPEYRLGSTKGAAEIKRHPFFEGLNWALIRWTAPPETPKSFDAASLTTARKKKEGKCLEFRLNGDDIEFELF |
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| Function | Serine/threonine-protein kinase KIPK2 [UniProtKB/Swiss-Prot:Q9SJM3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_04g0012940 | OsCMeo_04g0012940.03 | Chr04 | 20059107 | 20063617 | - | NAM | ||
| CDS seq | atgggttcttcaggttgctcagagatagtcgaattggtggatgagtcgaaggatgcccgtcctggtggtgtcacccacctgagggtgagagtgaagccggtgggtcaggagcatggagcgcggtcgtgctccgtcgaggatgatctcgataggctcattagatcgattaatgtgcgcacatccgcacgggcttctgggcagacgagcacggataggaggcttatcgcgctcgggaagtcgccgatatcgagctcggagattgttgagtctgtgagcctgaaacaggccctgaggaagatgtgcatctcgcaggcgtcggagatggccgccatgaagaggatgccgaagccgacggcggtgtcaaataccccagaagctggggcaattaagaagctttatacatctgttgtggttcaaaccaacaaggagcgggatgaaaagaataagtttggaaaagtgtccgttttgcctgagaaggatgtaataagttcatcggtgaagtcaacggaagccaagaacaaggtacggaacaaaagcccagctaagaaaaatgtgcgttcagcatctccaaccacaacaaaggtccagaaaaccagaatccaagatgtgatcagtaataagtcatctgaggcaagtgaagatttgcctgcaggtcctgcggtggctaaacagagaaagggcaaaatgaaaacatctagcccccgtgcagttcctgtgggcggttcacgcctggtgttccggagtaaaacctccaccaagaagaaggtcaaaccagaaccagctgctgcagtggtatctcacaagacttgtgaggcaaaaagttccaattctcaagctaataagaagcacgaggccctacaggatgaacccagaactccaacaccaatcaacaagaaggctgcggctagctctatcagcactgatggagctaattgtggcaccaaaggatgtggtgttggtgagatccatggttcaaagcccagtgagttgtcaagatcgaaggaaaagggtgaatgctcccaaagctcaaagagcagcatgggtgattatagcaccagcacaagcataagcgatgatagttatggtagtttcagtggcaatggctgcaggcctcacatgtcaaaagatgtgagatggggggccattaggcgcatggcaatccaacaagggagcctgggactgaagaacttcaagcttctcaaacaacttggttgtggagatattgggactgtttatctagctgaattggtgggttctgaatgcatgttcgcattgaaagttatggatatcgagtacctgataagtagaaagaagatgcttcgagcacaaactgagagggagatcctgcaaatgctcgaccacccatttcttccaactctgtattcttttttcacgaccgataatctgtcttgcctagtcatggagtattgccctggcggtgacctgcatgttctacgacagaaacagcctaccaggaccttttcagaagctgctgctaggttttatgttgctgaagttctcctagcattggaatatctacatatgttgggggtcatatatcgcgatctgaaaccagaaaacatacttgttcgtgaagatgggcacattatgctctctgatttcgatctgtccctgaggtgctcagtaaatccaatgcttgtaagggcctcatcagtaggaagagatgaacctagtagaccttctggcccttgtgcggaaagctgcattgatccactctgtatccaaccgtcatgggccaattcttcttgcttcacgcctcggctagtttcctctaccccttccaggccacggcggccgaggggtgagcctcagaagaaaccatcactgccacagcttgttgttgagccaactgatgcaaggtcaaattcgttcgtcggtacccatgaatatcttgcaccagagattatcagaggagatggccatggtagctcggtcgactggtggactcttggcatctttctctatgaattactctatggcaggacaccgttcaggggacccggcaatgaggagacactgacaaatgtggtctcgcaggggctgaagttccctgataaccctgctgtcagcttccatgcccgggatttgatcagagggttgcttgtgaaggatccggagtaccggctaggctcaacgaaaggagctgctgagatcaagcggcatcccttcttcgaaggcctgaactgggcattgatccgatggactgcaccgcctgagactccgaaaagcttcgacgcggcaagcctcacgacggcacggaagaagaaggaaggcaagtgcctggagttcaggctgaatggagacgacattgagtttgagctcttctag
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| Protein seq | MGSSGCSEIVELVDESKDARPGGVTHLRVRVKPVGQEHGARSCSVEDDLDRLIRSINVRTSARASGQTSTDRRLIALGKSPISSSEIVESVSLKQALRKMCISQASEMAAMKRMPKPTAVSNTPEAGAIKKLYTSVVVQTNKERDEKNKFGKVSVLPEKDVISSSVKSTEAKNKVRNKSPAKKNVRSASPTTTKVQKTRIQDVISNKSSEASEDLPAGPAVAKQRKGKMKTSSPRAVPVGGSRLVFRSKTSTKKKVKPEPAAAVVSHKTCEAKSSNSQANKKHEALQDEPRTPTPINKKAAASSISTDGANCGTKGCGVGEIHGSKPSELSRSKEKGECSQSSKSSMGDYSTSTSISDDSYGSFSGNGCRPHMSKDVRWGAIRRMAIQQGSLGLKNFKLLKQLGCGDIGTVYLAELVGSECMFALKVMDIEYLISRKKMLRAQTEREILQMLDHPFLPTLYSFFTTDNLSCLVMEYCPGGDLHVLRQKQPTRTFSEAAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLSDFDLSLRCSVNPMLVRASSVGRDEPSRPSGPCAESCIDPLCIQPSWANSSCFTPRLVSSTPSRPRRPRGEPQKKPSLPQLVVEPTDARSNSFVGTHEYLAPEIIRGDGHGSSVDWWTLGIFLYELLYGRTPFRGPGNEETLTNVVSQGLKFPDNPAVSFHARDLIRGLLVKDPEYRLGSTKGAAEIKRHPFFEGLNWALIRWTAPPETPKSFDAASLTTARKKKEGKCLEFRLNGDDIEFELF
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_04g0012940 | OsCMeo_04g0012940.01 | Chr04 | 20059786 | 20064158 | - | NAM | ||
| CDS seq | atgagcttggccaaaaccactcatcacgttacgcgcagcgccccggtgattactccagccatgttgccgcggcaggataatgcgccgctgacgctgcgggccacgcgcgcgctgagctccgcctccttgtcctactcgtcggcggcgctccagctaaaccctagtcccgtcgccgccgccaccgcggttctcctgccgggccccgtgatgccgcttcttgatccaggaaagctgcctctttggtcaccgaactgcaggcaaccactggtcctaacctga
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| Protein seq | MSLAKTTHHVTRSAPVITPAMLPRQDNAPLTLRATRALSSASLSYSSAALQLNPSPVAAATAVLLPGPVMPLLDPGKLPLWSPNCRQPLVLT |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_04g0012940 | OsCMeo_04g0012940.02 | Chr04 | 20059107 | 20063617 | - | NAM | ||
| CDS seq | atgggttcttcaggttgctcagagatagtcgaattggtggatgagtcgaaggatgcccgtcctggtggtgtcacccacctgagggtgagagtgaagccggtgggtcaggagcatggagcgcggtcgtgctccgtcgaggatgatctcgataggctcattagatcgattaatgtgcgcacatccgcacgggcttctgggcagacgagcacggataggaggcttatcgcgctcgggaagtcgccgatatcgagctcggagattgttgagtctgtgagcctgaaacaggccctgaggaagatgtgcatctcgcaggcgtcggagatggccgccatgaagaggatgccgaagccgacggcggtgtcaaataccccagaagctggggcaattaagaagctttatacatctgttgtggttcaaaccaacaaggagcgggatgaaaagaataagtttggaaaagtgtccgttttgcctgagaaggatgtaataagttcatcggtgaagtcaacggaagccaagaacaaggtacggaacaaaagcccagctaagaaaaatgtgcgttcagcatctccaaccacaacaaaggtccagaaaaccagaatccaagatgtgatcagtaataagtcatctgaggcaagtgaagatttgcctgcaggtcctgcggtggctaaacagagaaagggcaaaatgaaaacatctagcccccgtgcagttcctgtgggcggttcacgcctggtgttccggagtaaaacctccaccaagaagaaggtcaaaccagaaccagctgctgcagtggtatctcacaagacttgtgaggcaaaaagttccaattctcaagctaataagaagcacgaggccctacaggatgaacccagaactccaacaccaatcaacaagaaggctgcggctagctctatcagcactgatggagctaattgtggcaccaaaggatgtggtgttggtgagatccatggttcaaagcccagtgagttgtcaagatcgaaggaaaagggtgaatgctcccaaagctcaaagagcagcatgggtgattatagcaccagcacaagcataagcgatgatagttatggtagtttcagtggcaatggctgcaggcctcacatgtcaaaagatgtgagatggggggccattaggcgcatggcaatccaacaagggagcctgggactgaagaacttcaagcttctcaaacaacttggttgtggagatattgggactgtttatctagctgaattggtgggttctgaatgcatgttcgcattgaaagttatggatatcgagtacctgataagtagaaagaagatgcttcgagcacaaactgagagggagatcctgcaaatgctcgaccacccatttcttccaactctgtattcttttttcacgaccgataatctgtcttgcctagtcatggagtattgccctggcggtgacctgcatgttctacgacagaaacagcctaccaggaccttttcagaagctgctgctaggttttatgttgctgaagttctcctagcattggaatatctacatatgttgggggtcatatatcgcgatctgaaaccagaaaacatacttgttcgtgaagatgggcacattatgctctctgatttcgatctgtccctgaggtgctcagtaaatccaatgcttgtaagggcctcatcagtaggaagagatgaacctagtagaccttctggcccttgtgcggaaagctgcattgatccactctgtatccaaccgtcatgggccaattcttcttgcttcacgcctcggctagtttcctctaccccttccaggccacggcggccgaggggtgagcctcagaagaaaccatcactgccacagcttgttgttgagccaactgatgcaaggtcaaattcgttcgtcggtacccatgaatatcttgcaccagagattatcagaggagatggccatggtagctcggtcgactggtggactcttggcatctttctctatgaattactctatggcaggacaccgttcaggggacccggcaatgaggagacactgacaaatgtggtctcgcaggggctgaagttccctgataaccctgctgtcagcttccatgcccgggatttgatcagagggttgcttgtgaaggatccggagtaccggctaggctcaacgaaaggagctgctgagatcaagcggcatcccttcttcgaaggcctgaactgggcattgatccgatggactgcaccgcctgagactccgaaaagcttcgacgcggcaagcctcacgacggcacggaagaagaaggaaggcaagtgcctggagttcaggctgaatggagacgacattgagtttgagctcttctag
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| Protein seq | MGSSGCSEIVELVDESKDARPGGVTHLRVRVKPVGQEHGARSCSVEDDLDRLIRSINVRTSARASGQTSTDRRLIALGKSPISSSEIVESVSLKQALRKMCISQASEMAAMKRMPKPTAVSNTPEAGAIKKLYTSVVVQTNKERDEKNKFGKVSVLPEKDVISSSVKSTEAKNKVRNKSPAKKNVRSASPTTTKVQKTRIQDVISNKSSEASEDLPAGPAVAKQRKGKMKTSSPRAVPVGGSRLVFRSKTSTKKKVKPEPAAAVVSHKTCEAKSSNSQANKKHEALQDEPRTPTPINKKAAASSISTDGANCGTKGCGVGEIHGSKPSELSRSKEKGECSQSSKSSMGDYSTSTSISDDSYGSFSGNGCRPHMSKDVRWGAIRRMAIQQGSLGLKNFKLLKQLGCGDIGTVYLAELVGSECMFALKVMDIEYLISRKKMLRAQTEREILQMLDHPFLPTLYSFFTTDNLSCLVMEYCPGGDLHVLRQKQPTRTFSEAAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLSDFDLSLRCSVNPMLVRASSVGRDEPSRPSGPCAESCIDPLCIQPSWANSSCFTPRLVSSTPSRPRRPRGEPQKKPSLPQLVVEPTDARSNSFVGTHEYLAPEIIRGDGHGSSVDWWTLGIFLYELLYGRTPFRGPGNEETLTNVVSQGLKFPDNPAVSFHARDLIRGLLVKDPEYRLGSTKGAAEIKRHPFFEGLNWALIRWTAPPETPKSFDAASLTTARKKKEGKCLEFRLNGDDIEFELF
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_04g0012940 | OsCMeo_04g0012940.04 | Chr04 | 20059107 | 20063617 | - | NAM | ||
| CDS seq | atgggttcttcaggttgctcagagatagtcgaattggtggatgagtcgaaggatgcccgtcctggtggtgtcacccacctgagggtgagagtgaagccggtgggtcaggagcatggagcgcggtcgtgctccgtcgaggatgatctcgataggctcattagatcgattaatgtgcgcacatccgcacgggcttctgggcagacgagcacggataggaggcttatcgcgctcgggaagtcgccgatatcgagctcggagattgttgagtctgtgagcctgaaacaggccctgaggaagatgtgcatctcgcaggcgtcggagatggccgccatgaagaggatgccgaagccgacggcggtgtcaaataccccagaagctggggcaattaagaagctttatacatctgttgtggttcaaaccaacaaggagcgggatgaaaagaataagtttggaaaagtgtccgttttgcctgagaaggatgtaataagttcatcggtgaagtcaacggaagccaagaacaaggtacggaacaaaagcccagctaagaaaaatgtgcgttcagcatctccaaccacaacaaaggtccagaaaaccagaatccaagatgtgatcagtaataagtcatctgaggcaagtgaagatttgcctgcaggtcctgcggtggctaaacagagaaagggcaaaatgaaaacatctagcccccgtgcagttcctgtgggcggttcacgcctggtgttccggagtaaaacctccaccaagaagaaggtcaaaccagaaccagctgctgcagtggtatctcacaagacttgtgaggcaaaaagttccaattctcaagctaataagaagcacgaggccctacaggatgaacccagaactccaacaccaatcaacaagaaggctgcggctagctctatcagcactgatggagctaattgtggcaccaaaggatgtggtgttggtgagatccatggttcaaagcccagtgagttgtcaagatcgaaggaaaagggtgaatgctcccaaagctcaaagagcagcatgggtgattatagcaccagcacaagcataagcgatgatagttatggtagtttcagtggcaatggctgcaggcctcacatgtcaaaagatgtgagatggggggccattaggcgcatggcaatccaacaagggagcctgggactgaagaacttcaagcttctcaaacaacttggttgtggagatattgggactgtttatctagctgaattggtgggttctgaatgcatgttcgcattgaaagttatggatatcgagtacctgataagtagaaagaagatgcttcgagcacaaactgagagggagatcctgcaaatgctcgaccacccatttcttccaactctgtattcttttttcacgaccgataatctgtcttgcctagtcatggagtattgccctggcggtgacctgcatgttctacgacagaaacagcctaccaggaccttttcagaagctgctgctaggttttatgttgctgaagttctcctagcattggaatatctacatatgttgggggtcatatatcgcgatctgaaaccagaaaacatacttgttcgtgaagatgggcacattatgctctctgatttcgatctgtccctgaggtgctcagtaaatccaatgcttgtaagggcctcatcagtaggaagagatgaacctagtagaccttctggcccttgtgcggaaagctgcattgatccactctgtatccaaccgtcatgggccaattcttcttgcttcacgcctcggctagtttcctctaccccttccaggccacggcggccgaggggtgagcctcagaagaaaccatcactgccacagcttgttgttgagccaactgatgcaaggtcaaattcgttcgtcggtacccatgaatatcttgcaccagagattatcagaggagatggccatggtagctcggtcgactggtggactcttggcatctttctctatgaattactctatggcaggacaccgttcaggggacccggcaatgaggagacactgacaaatgtggtctcgcaggggctgaagttccctgataaccctgctgtcagcttccatgcccgggatttgatcagagggttgcttgtgaaggatccggagtaccggctaggctcaacgaaaggagctgctgagatcaagcggcatcccttcttcgaaggcctgaactgggcattgatccgatggactgcaccgcctgagactccgaaaagcttcgacgcggcaagcctcacgacggcacggaagaagaaggaaggcaagtgcctggagttcaggctgaatggagacgacattgagtttgagctcttctag
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| Protein seq | MGSSGCSEIVELVDESKDARPGGVTHLRVRVKPVGQEHGARSCSVEDDLDRLIRSINVRTSARASGQTSTDRRLIALGKSPISSSEIVESVSLKQALRKMCISQASEMAAMKRMPKPTAVSNTPEAGAIKKLYTSVVVQTNKERDEKNKFGKVSVLPEKDVISSSVKSTEAKNKVRNKSPAKKNVRSASPTTTKVQKTRIQDVISNKSSEASEDLPAGPAVAKQRKGKMKTSSPRAVPVGGSRLVFRSKTSTKKKVKPEPAAAVVSHKTCEAKSSNSQANKKHEALQDEPRTPTPINKKAAASSISTDGANCGTKGCGVGEIHGSKPSELSRSKEKGECSQSSKSSMGDYSTSTSISDDSYGSFSGNGCRPHMSKDVRWGAIRRMAIQQGSLGLKNFKLLKQLGCGDIGTVYLAELVGSECMFALKVMDIEYLISRKKMLRAQTEREILQMLDHPFLPTLYSFFTTDNLSCLVMEYCPGGDLHVLRQKQPTRTFSEAAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLSDFDLSLRCSVNPMLVRASSVGRDEPSRPSGPCAESCIDPLCIQPSWANSSCFTPRLVSSTPSRPRRPRGEPQKKPSLPQLVVEPTDARSNSFVGTHEYLAPEIIRGDGHGSSVDWWTLGIFLYELLYGRTPFRGPGNEETLTNVVSQGLKFPDNPAVSFHARDLIRGLLVKDPEYRLGSTKGAAEIKRHPFFEGLNWALIRWTAPPETPKSFDAASLTTARKKKEGKCLEFRLNGDDIEFELF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| SE | Chr04 | 20062756 | 20063253 | - | OsCMeo_04g0012940.02 | OsCMeo_04g0012940.01,OsCMeo_04g0012940.04,OsCMeo_04g0012940.02 | All |
| SE | Chr04 | 20062756 | 20063253 | - | OsCMeo_04g0012940.03 | OsCMeo_04g0012940.01,OsCMeo_04g0012940.04,OsCMeo_04g0012940.03 | All |
| A5 | Chr04 | 20062756 | 20062887 | - | OsCMeo_04g0012940.02 | OsCMeo_04g0012940.03,OsCMeo_04g0012940.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.104711 | 2.215428 | 10.000900 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0410200 | RBH | 1.181623 | 0.829546 | 6.565369 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g33500 | RBH | 0.799075 | 0.268848 | 1.690054 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0410200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0012410 | RBH | 0.203334 | 3.257906 | 5.527225 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0013230 | RBH | 0.159492 | 2.403771 | 2.378361 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0021190 | SBH | 0.393410 | 3.123955 | 4.521783 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0012560 | RBH | 0.053179 | 0.146623 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0012890 | RBH | 3.168775 | 10.528924 | 11.354764 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0319500 | RBH | 12.377294 | 19.314986 | 88.0352515 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0011800 | RBH | 0.096346 | 0.299076 | 0.567596 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0316500 | RBH | 10.5816395 | 9.065573 | 64.6768435 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0012380 | RBH | 0.249486 | 0.207470 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0012000 | RBH | 0.451215 | 3.590714 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0012020 | RBH | 4.092607 | 10.951121 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0012580 | RBH | 0.307985 | 0.713151 | 0.884871 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0012810 | RBH | 0.146678 | 2.312930 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G011940 | RBH | 0.194698 | 4.213973 | 3.035745 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0011960 | RBH | 0.579670 | 7.789029 | 7.764102 |
