Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_04g0010450 | OGI:04059010 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr04:17405170-17410032 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ttaacgtgcaagattagcggataacaaaaattcttgctccaagctatagcaacttgcagatggcatattagcaagattgttgacatcaactcccagagcttgacgatgcaaatatcttttactttgcaccggctgtatgtcatgatttctgtcagcagcactgtctgatctcatacctttatctcttatagactgtaatgccaactccacgtgcttcatggtaggtctttcttcacctctaagtctcaagcaggcctgcgcaatagaggcaacggtatttatctcatcctcggttgcttcttcaagaacttcaggggcagctatttccataattgatcttacggttatctcagaaaggaagtaaatagataatttttttagtgaatcagacccacttttgaaaatagcttgttttctgagaagcagctctaaaagaacaataccaaagctatacacatcactcttctcatttagacgcccagtatggtaatactcaggatctaagtacccaaatgtgccttgtatatttgtagaaacatgggtttgatcattagaaattaatcttgaagacccaaaatccgaaactttagctgtatagtttgcatccaaaagtatattagaagatttcacgtcacgatgaaagaccgatattgatgctgcagagtgaaggtagtacaaagctcctgcggtttctgtggcaatcctcaaacaattagcccaggacaatgagaattctctattatttggatcagcatgaataatatgattcagtgaaccatttgggacaaagtcataaaccagtagagggacatcagtttcaaggcaacacccaaaaagtttcacaatattgcgatggtttatccgtgacagtattgcaacctcattgatgaactgactaatctcttcttccttaatagtgttaggcttttttatggccaccacacgcttatctgacaagatgcccttgtaaactgtaccatgtcctccactaccaagaacacgtgcttgattgaagttgttggttgccattttcagctcttctagtgagaaaatttttgtgctatgatcagttgctgtttcatctgaagatattagttgttcaagcagaagtccttggtttttctgaaaatattttttccgtaattgcatttgtctattgcttcttttcttacgaataagcaatgtcacagataagctaagcagaagaattccaatgccaccacccagaccaattgcaatgccgcctacaaatattgattcctattgaagttatgttcgtataattgaatattaaactataggactacttgattaactgctattatattgcttacttttctttctttcttggtatgaaaaaaatggctcggaatctatgcaaagtttgaaaaacacatataatttattcctcttaattaatgtctatatgaatgtaccacttcgtaactatgccaaagaacatatatagaaaaaagaagtgttattgccttcttcaaaatagtacaaagatgattttcagttaaaaaaatattggaaagacgaattttcttttccatgggaatagtcaagcaatagctatttacgtacctaggagaacatggtagtgcctaaaatatgccgcagtgcatacataaccacccatatgattatcgcaaacagtaccattgcaaattcctggtatttggcattcatcgatatctgtaacaaatcttaattaggtgagaactgagaagcagtgtacaaacaactagtccaattcgatggtattacctgtgcatccattctggatataaggatttccttggaaacctttagtgcagttgcaccgatagccaacataaccagaagtagagtacatctgaacacaagtgctgttagtactaacgcatgcatatccagaggcattatgttttgcttccgggcatgttagattggcaacagcccatctaacagagagagggtattcccaaaggccatcatatagatgtggttctccacctatcgccaaaaactcctgaacaccatcaccactaccgttatgtttaatctgcacaactccttcctcaacttttatgtcagtcacctgattatagtcatcgaatcgcagagttgagtttgcgtctgtacagttgagatggaatagttttcttgcaaaacaaccttcttcgagaccaaatggatagggaacgctgatgttcccacatgaccgggaacagtctgtcctctgtggaaaaggattatatcctgtttacatggggaaaatgtcattgaaatctgcctccacaaagtactgaatcattacatttgctctactgggaaatctcttactaattagaggaacttctggaaaccctagcttagtgtcttagatgagtagaaaaattacagatattgcaaataagttgtcacaaaatctaaatggttaaaagacagtcatgataacaatgaaagggtggaacctctacatatgtagttcttgagacaaatataattatgttttaaaatccgtatgttggctataccatggcttctatgtgctacaatagtttatatatgtagttttgttacaattttgaacaatttactcataaaacactactagggaaacaagtattaatgacggtaaatttggtcgttaaaggtcataatgtggtcactaaagatcattaagcaccataaaaaatgttgtcatcagtggtagttaaagactgcgtcgttaatgtatcagcgaccacacaatatttcctgtcattagtttaccaacaactgtattttttaaccattgttactcttactaacgaccatatattatgccatcgtgattctatcaacgaccgtgacatatctccatagttattagattaacgatggtgaatttgtgtcatcgtaatttttttagtgacaaaggtctagtcaaaatgatgaccacacacatacaaaaatatgttaatagaccaataactgcaatctagtggcaattctttattcatcaaaggtgtataacataactcattcattatatagttggtgtatttgactttattttttgctaaaaaaagccactaattatcaaaggtgtataacataactcattcattcgggacggagggagtaattatcaacagaaactatactaacgaccgcagagaaacaaaaattaacaaccgtaaaaaagctctggtcatcggtcatgctttagctaccaattttgtactgaaaccttgaccaaatacataacgagcgataaatttattttactcgtcgttgatatttcctattctagtagtgaaaactctagaaattacgacccgaatgaagagaaagataaaatcgtaagtatccaatttatttctttaatatggaggtatctattgtctacaatataaattgaacaaacaacaaaaataattgaaccatcttgaatacattgaagtacgtaaaatctggagttgaccacgaaatatacatgatttggtcaaacctgttaaatgtaccacctttgttaaggtctcttatacaacaattttatattggaataagttaagctacgtgttaagcttatgtcaattaatagtactgaactatttttcaatacagatatatacataatatttttatgtttctaaactacatcattcatttcacaatgtaagtcattctagcacttccctcattcatattgatgttaatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggatatgctagaatgactgccattgtgaaacgaatgtagtattttatagaagtcattgatagtgaaagttttaaatgttaactagatcctgtctaaatgtcctttattcatgaccagtatatacatataaatactaactgggatgtttggaattatatatgcatgatcaaatatgtagaaaaaagtattaaattctttgtatacctacagtaaaacttaagaaagatatctgaccaggacatttcgccccgggtgataaactgtatacaattatatatctaattttggggtaattgaattacctttgtcatgagagcagccctccggaatatagggatttcctgcaaagccagaatcgcagttgcactgatatccaaggtttgttgacctgcatgagctattcccactgacacaggcatagctcttctggttaccaatggccctgctgctgcaagttgtttgatcaacaatactccattcgaggtcggcagagtataaagtaaattggattttattccacaaggaactgttgttagagtgagattcctttgtactgttgtgctggacaaattggagatcaaaggagctgataaaagtatcaaccgggctggtacagcacccgataccgctacagttcatcatagcctccgcctccgtcattttttccttcgggcaggtgatactgcaaagcagaacggactggttatagtatatatccatgtcgcaaccgacgatttgcaccatggcatcttgtagaaaaaagcttttaggagaggtccaggtatagttgtaaacatcgacgccgggcaccacggtgatggtgtcggacatgttgacgccaaaactggtgtctctgtcgtccacgacgatgtcgtcgacaacctgcagggtgcctccctgtaaaaagaggctcggtggctggaggtggtcgccgtggcggcaaacgagctcaaaatcatagttgcggaagcagccttgcccgatgccgaaggggtaggcgaatgccaaattgccgcaactgttgttgcagccggcgagcgttggcgctgctagagcaccacccggaatcggaggcagcactagtacaagcagagagtatgctgcaggtaataagaaaatcat
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| CDS seq | atgattttcttattacctgcagcatactctctgcttgtactagtgctgcctccgattccgggtggtgctctagcagcgccaacgctcgccggctgcaacaacagttgcggcaatttggcattcgcctaccccttcggcatcgggcaaggctgcttccgcaactatgattttgagctcgtttgccgccacggcgaccacctccagccaccgagcctctttttacagggaggcaccctgcaggttgtcgacgacatcgtcgtggacgacagagacaccagttttggcgtcaacatgtccgacaccatcaccgtggtgcccggcgtcgatgtttacaactatacctggacctctcctaaaagcttttttctacaagatgccatggtgcaaatcgtcggttgcgacatggatatatactataaccagtccgttctgctttgcagtatcacctgcccgaaggaaaaaatgacggaggcggaggctatgatgaactgtagcggtatcgggtgctgtaccagcccggttgatacttttatcagctcctttgatctccaatttgtccagcacaacagtacaaaggaatctcactctaacaacagttccttgtggaataaaatccaatttactttatactctgccgacctcgaatggagtattgttgatcaaacaacttgcagcagcagggccattggtaaccagaagagctatgcctgtgtcagtgggaatagctcatgcaggtcaacaaaccttggatatcagtgcaactgcgattctggctttgcaggaaatccctatattccggagggctgctctcatgacaaaggatataatccttttccacagaggacagactgttcccggtcatgtgggaacatcagcgttccctatccatttggtctcgaagaaggttgttttgcaagaaaactattccatctcaactgtacagacgcaaactcaactctgcgattcgatgactataatcaggtgactgacataaaagttgaggaaggagttgtgcagattaaacataacggtagtggtgatggtgttcaggagtttttggcgataggtggagaaccacatctatatgatggcctttgggaataccctctctctgttagatgggctgttgccaatctaacatgcccggaagcaaaacataatgcctctggatatgcatgcgttagtactaacagcacttgtgttcagatgtactctacttctggttatgttggctatcggtgcaactgcactaaaggtttccaaggaaatccttatatccagaatggatgcacaggcggcattgcaattggtctgggtggtggcattggaattcttctgcttagcttatctgtgacattgcttattcgtaagaaaagaagcaatagacaaatgcaattacggaaaaaatattttcagaaaaaccaaggacttctgcttgaacaactaatatcttcagatgaaacagcaactgatcatagcacaaaaattttctcactagaagagctgaaaatggcaaccaacaacttcaatcaagcacgtgttcttggtagtggaggacatggtacagtttacaagggcatcttgtcagataagcgtgtggtggccataaaaaagcctaacactattaaggaagaagagattagtcagttcatcaatgaggttgcaatactgtcacggataaaccatcgcaatattgtgaaactttttgggtgttgccttgaaactgatgtccctctactggtttatgactttgtcccaaatggttcactgaatcatattattcatgctgatccaaataatagagaattctcattgtcctgggctaattgtttgaggattgccacagaaaccgcaggagctttgtactaccttcactctgcagcatcaatatcggtctttcatcgtgacgtgaaatcttctaatatacttttggatgcaaactatacagctaaagtttcggattttgggtcttcaagattaatttctaatgatcaaacccatgtttctacaaatatacaaggcacatttgggtacttagatcctgagtattaccatactgggcgtctaaatgagaagagtgatgtgtatagctttggtattgttcttttagagctgcttctcagaaaacaagctattttcaaaagtgggtctgattcactaaaaaaattatctatttacttcctttctgagataaccgtaagatcaattatggaaatagctgcccctgaagttcttgaagaagcaaccgaggatgagataaataccgttgcctctattgcgcaggcctgcttgagacttagaggtgaagaaagacctaccatgaagcacgtggagttggcattacagtctataagagataaaggtatgagatcagacagtgctgctgacagaaatcatgacatacagccggtgcaaagtaaaagatatttgcatcgtcaagctctgggagttgatgtcaacaatcttgctaatatgccatctgcaagttgctatagcttggagcaagaatttttgttatccgctaatcttgcacgttaa
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| Protein seq | MIFLLPAAYSLLVLVLPPIPGGALAAPTLAGCNNSCGNLAFAYPFGIGQGCFRNYDFELVCRHGDHLQPPSLFLQGGTLQVVDDIVVDDRDTSFGVNMSDTITVVPGVDVYNYTWTSPKSFFLQDAMVQIVGCDMDIYYNQSVLLCSITCPKEKMTEAEAMMNCSGIGCCTSPVDTFISSFDLQFVQHNSTKESHSNNSSLWNKIQFTLYSADLEWSIVDQTTCSSRAIGNQKSYACVSGNSSCRSTNLGYQCNCDSGFAGNPYIPEGCSHDKGYNPFPQRTDCSRSCGNISVPYPFGLEEGCFARKLFHLNCTDANSTLRFDDYNQVTDIKVEEGVVQIKHNGSGDGVQEFLAIGGEPHLYDGLWEYPLSVRWAVANLTCPEAKHNASGYACVSTNSTCVQMYSTSGYVGYRCNCTKGFQGNPYIQNGCTGGIAIGLGGGIGILLLSLSVTLLIRKKRSNRQMQLRKKYFQKNQGLLLEQLISSDETATDHSTKIFSLEELKMATNNFNQARVLGSGGHGTVYKGILSDKRVVAIKKPNTIKEEEISQFINEVAILSRINHRNIVKLFGCCLETDVPLLVYDFVPNGSLNHIIHADPNNREFSLSWANCLRIATETAGALYYLHSAASISVFHRDVKSSNILLDANYTAKVSDFGSSRLISNDQTHVSTNIQGTFGYLDPEYYHTGRLNEKSDVYSFGIVLLELLLRKQAIFKSGSDSLKKLSIYFLSEITVRSIMEIAAPEVLEEATEDEINTVASIAQACLRLRGEERPTMKHVELALQSIRDKGMRSDSAADRNHDIQPVQSKRYLHRQALGVDVNNLANMPSASCYSLEQEFLLSANLAR |
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| Function | Wall-associated receptor kinase 5 [UniProtKB/Swiss-Prot:Q9LMN7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_04g0010450 | OsCMeo_04g0010450.01 | Chr04 | 17405170 | 17410032 | - | NAM | ||
| CDS seq | atgattttcttattacctgcagcatactctctgcttgtactagtgctgcctccgattccgggtggtgctctagcagcgccaacgctcgccggctgcaacaacagttgcggcaatttggcattcgcctaccccttcggcatcgggcaaggctgcttccgcaactatgattttgagctcgtttgccgccacggcgaccacctccagccaccgagcctctttttacagggaggcaccctgcaggttgtcgacgacatcgtcgtggacgacagagacaccagttttggcgtcaacatgtccgacaccatcaccgtggtgcccggcgtcgatgtttacaactatacctggacctctcctaaaagcttttttctacaagatgccatggtgcaaatcgtcggttgcgacatggatatatactataaccagtccgttctgctttgcagtatcacctgcccgaaggaaaaaatgacggaggcggaggctatgatgaactgtagcggtatcgggtgctgtaccagcccggttgatacttttatcagctcctttgatctccaatttgtccagcacaacagtacaaaggaatctcactctaacaacagttccttgtggaataaaatccaatttactttatactctgccgacctcgaatggagtattgttgatcaaacaacttgcagcagcagggccattggtaaccagaagagctatgcctgtgtcagtgggaatagctcatgcaggtcaacaaaccttggatatcagtgcaactgcgattctggctttgcaggaaatccctatattccggagggctgctctcatgacaaaggatataatccttttccacagaggacagactgttcccggtcatgtgggaacatcagcgttccctatccatttggtctcgaagaaggttgttttgcaagaaaactattccatctcaactgtacagacgcaaactcaactctgcgattcgatgactataatcaggtgactgacataaaagttgaggaaggagttgtgcagattaaacataacggtagtggtgatggtgttcaggagtttttggcgataggtggagaaccacatctatatgatggcctttgggaataccctctctctgttagatgggctgttgccaatctaacatgcccggaagcaaaacataatgcctctggatatgcatgcgttagtactaacagcacttgtgttcagatgtactctacttctggttatgttggctatcggtgcaactgcactaaaggtttccaaggaaatccttatatccagaatggatgcacaggcggcattgcaattggtctgggtggtggcattggaattcttctgcttagcttatctgtgacattgcttattcgtaagaaaagaagcaatagacaaatgcaattacggaaaaaatattttcagaaaaaccaaggacttctgcttgaacaactaatatcttcagatgaaacagcaactgatcatagcacaaaaattttctcactagaagagctgaaaatggcaaccaacaacttcaatcaagcacgtgttcttggtagtggaggacatggtacagtttacaagggcatcttgtcagataagcgtgtggtggccataaaaaagcctaacactattaaggaagaagagattagtcagttcatcaatgaggttgcaatactgtcacggataaaccatcgcaatattgtgaaactttttgggtgttgccttgaaactgatgtccctctactggtttatgactttgtcccaaatggttcactgaatcatattattcatgctgatccaaataatagagaattctcattgtcctgggctaattgtttgaggattgccacagaaaccgcaggagctttgtactaccttcactctgcagcatcaatatcggtctttcatcgtgacgtgaaatcttctaatatacttttggatgcaaactatacagctaaagtttcggattttgggtcttcaagattaatttctaatgatcaaacccatgtttctacaaatatacaaggcacatttgggtacttagatcctgagtattaccatactgggcgtctaaatgagaagagtgatgtgtatagctttggtattgttcttttagagctgcttctcagaaaacaagctattttcaaaagtgggtctgattcactaaaaaaattatctatttacttcctttctgagataaccgtaagatcaattatggaaatagctgcccctgaagttcttgaagaagcaaccgaggatgagataaataccgttgcctctattgcgcaggcctgcttgagacttagaggtgaagaaagacctaccatgaagcacgtggagttggcattacagtctataagagataaaggtatgagatcagacagtgctgctgacagaaatcatgacatacagccggtgcaaagtaaaagatatttgcatcgtcaagctctgggagttgatgtcaacaatcttgctaatatgccatctgcaagttgctatagcttggagcaagaatttttgttatccgctaatcttgcacgttaa
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| Protein seq | MIFLLPAAYSLLVLVLPPIPGGALAAPTLAGCNNSCGNLAFAYPFGIGQGCFRNYDFELVCRHGDHLQPPSLFLQGGTLQVVDDIVVDDRDTSFGVNMSDTITVVPGVDVYNYTWTSPKSFFLQDAMVQIVGCDMDIYYNQSVLLCSITCPKEKMTEAEAMMNCSGIGCCTSPVDTFISSFDLQFVQHNSTKESHSNNSSLWNKIQFTLYSADLEWSIVDQTTCSSRAIGNQKSYACVSGNSSCRSTNLGYQCNCDSGFAGNPYIPEGCSHDKGYNPFPQRTDCSRSCGNISVPYPFGLEEGCFARKLFHLNCTDANSTLRFDDYNQVTDIKVEEGVVQIKHNGSGDGVQEFLAIGGEPHLYDGLWEYPLSVRWAVANLTCPEAKHNASGYACVSTNSTCVQMYSTSGYVGYRCNCTKGFQGNPYIQNGCTGGIAIGLGGGIGILLLSLSVTLLIRKKRSNRQMQLRKKYFQKNQGLLLEQLISSDETATDHSTKIFSLEELKMATNNFNQARVLGSGGHGTVYKGILSDKRVVAIKKPNTIKEEEISQFINEVAILSRINHRNIVKLFGCCLETDVPLLVYDFVPNGSLNHIIHADPNNREFSLSWANCLRIATETAGALYYLHSAASISVFHRDVKSSNILLDANYTAKVSDFGSSRLISNDQTHVSTNIQGTFGYLDPEYYHTGRLNEKSDVYSFGIVLLELLLRKQAIFKSGSDSLKKLSIYFLSEITVRSIMEIAAPEVLEEATEDEINTVASIAQACLRLRGEERPTMKHVELALQSIRDKGMRSDSAADRNHDIQPVQSKRYLHRQALGVDVNNLANMPSASCYSLEQEFLLSANLAR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.000000 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0307900 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g29810 | RBH | 0.476553 | 0.0 | 0.218055 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0307900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0009860 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0010620 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0010030 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0010260 | RBH | 0.0 | 0.0 | 0.413655 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0296100 | SBH | 0 | 0 | 0.2396105 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0010110 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0279000 | RBH | 0.3465955 | 0 | 0.105909 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0010040 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0010300 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0010350 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0010840 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0010170 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G009320 | RBH | 0.426020 | 0.0 | 0.646698 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0009360 | SBH | 0.000000 | 0.0 | 0.0 |
