Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_03g0036390 | OGI:03090040 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr03:33663962-33666379 | ||||||||
| Gene Symbol | RHS10, RLCK123, OsRLCK123 | ||||||||||
| DNA seq | aatcaaaccatttcctcctctttctatatccaacaatatttccaataaaaattgggcacactttgtgttagttgacttcccacaccacacatggccaccccaagtgatacccagcaactcagaagctgctgctacctgctcacccggtgcggaggctgcttccactccgcgctcatctcgccggagaaagacacatcgtctcgccggccggactccagcctcgccgccgtcgcctcctgaatgatccggtccatgtcgaacgtgtacgacccggaagcctcgctgatgctgcccccggtctccgccgtgccgaacaccatgctctgccccggccgcatcccctcgttcaggtcctccagcgacatgtccccctccagcgccctcacgatctgcaccgattttcatctccggtgagccctgcacggctggcggcggcgccgccggcgccggagacgatggtcatgacacatggcattgacatacctggctcatcttggggcgcttcttcgccgagtggcggacggacgcggcggcgctggcgacgacgcgcgccatctccaccgcgtcgtagctgccctccagcctcgggtcggcgacgccgccgtagtcgccgtcggccagcgcgcgcgccatggccggccgcgcccactcgacgaggctgtcgtcctccatgaaggaggcgggccaggggtggtcggcggcgccggcgtcgatgggccgccgccccgtcacgagctccagcagcatcacgccgtaggagaacacgtccgacttctccgtcagcttcccgctcgacgcgtactccggcgccaggtacccgaacgtccccatcacgcgcgtcgacacgtgcgtgttgttgtctgacgtcagcttcgccagcccgaaatccgccacctgaaatgacacaaaccatcagataatcggatgccgcaatttgaaatgcagcaatttttttttaaaagaaaggaaaatctgcagcaatttgaaatgttacctttgcttcgaagttgttgtcgaggaggatgttggcggatttgatgtcgcggtggatgatccgaggatggccttcatggtcaaaatggcaaatgcaatttcaattcagatatgaaaaatcgtagacatttttaaacatcaaatttattggagcaatggtgctcacagtcttcgtgtaggtaggcgagccccttcgccgacccgagcgcaatgcgcagcctcgtcggccatggcatcaccggcaagcctttccctgaaccaacaagaattggatgtttcttgatcttgcggcgaggtgagggaggcagcaatggcgtggtaagctagagtgatcgagtgactgaccatggaggtggaactcgagggtcttgtttgggacgaactcgtagacgagcacgcggcgcgcgccggcgatgcagtagccgacgagggagacgaggtggcggtggtgcacccggctgatgatgtccacctcggcctggaactcgcgctccccctggccgctgccggacttgagctgcttcacggccaccgccttgccgccggcgagcacccccttgtgcacgtacccgaacccgccctgcccgaccaggttctcctccgcgaagccccccgtcgccgccgcgagctgctcgtaggtgaacgtccccttgctcatccccgccgcgtcgctcgtcgacggcgccgcgcggggctcggccagccatggcggcggtggcggcggcttcggcccgctggtgtcgcggccgccgccgcctttggatcccgaggtgtccgcgtcgaaatgcgtgacggggttgtgaggcttcttcttcctcttcctcctcggcgccgtcttcctcgagcagcagaggcaggcggcgacgaggagcacgaggagcgcggcggccccgacggcggcgaagacgatctcgaccatggcgttgtacccgccgcggcgcgcggaggcgagcgccgacctggcgacgtcctccgagccggagccgccaccggaggagcgagacggcggggaggggaccctggccggcgacggcgggggtgcgccgccgccgccgccatgtggattcgacggcgccggtggaggcgagacggatggcgccggggaggaggacgaggacgaattggtgggcgacggcgaagcggccataagaggagggctgctcttcggcggcgggacgatcgacatggccgcgcgatcacaaatccgtctcgccgggcgtcgatatcgtgctccgccgcaccgccataggctcaccggcgaggaggaggaggaggaagggaggggtaggtactcaggcggccgcgttgctgggtggcggtggcggcgcgcggcgctgtcgtttccatgcggccgccattgggggggggggggggggggtgtctctggttggtgtttggttacctcatccgcactgatcagcccgt
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| CDS seq | atgtcgatcgtcccgccgccgaagagcagccctcctcttatggccgcttcgccgtcgcccaccaattcgtcctcgtcctcctccccggcgccatccgtctcgcctccaccggcgccgtcgaatccacatggcggcggcggcggcgcacccccgccgtcgccggccagggtcccctccccgccgtctcgctcctccggtggcggctccggctcggaggacgtcgccaggtcggcgctcgcctccgcgcgccgcggcgggtacaacgccatggtcgagatcgtcttcgccgccgtcggggccgccgcgctcctcgtgctcctcgtcgccgcctgcctctgctgctcgaggaagacggcgccgaggaggaagaggaagaagaagcctcacaaccccgtcacgcatttcgacgcggacacctcgggatccaaaggcggcggcggccgcgacaccagcgggccgaagccgccgccaccgccgccatggctggccgagccccgcgcggcgccgtcgacgagcgacgcggcggggatgagcaaggggacgttcacctacgagcagctcgcggcggcgacggggggcttcgcggaggagaacctggtcgggcagggcgggttcgggtacgtgcacaagggggtgctcgccggcggcaaggcggtggccgtgaagcagctcaagtccggcagcggccagggggagcgcgagttccaggccgaggtggacatcatcagccgggtgcaccaccgccacctcgtctccctcgtcggctactgcatcgccggcgcgcgccgcgtgctcgtctacgagttcgtcccaaacaagaccctcgagttccacctccatgggaaaggcttgccggtgatgccatggccgacgaggctgcgcattgcgctcgggtcggcgaaggggctcgcctacctacacgaagactgccatcctcggatcatccaccgcgacatcaaatccgccaacatcctcctcgacaacaacttcgaagcaaaggtggcggatttcgggctggcgaagctgacgtcagacaacaacacgcacgtgtcgacgcgcgtgatggggacgttcgggtacctggcgccggagtacgcgtcgagcgggaagctgacggagaagtcggacgtgttctcctacggcgtgatgctgctggagctcgtgacggggcggcggcccatcgacgccggcgccgccgaccacccctggcccgcctccttcatggaggacgacagcctcgtcgagtgggcgcggccggccatggcgcgcgcgctggccgacggcgactacggcggcgtcgccgacccgaggctggagggcagctacgacgcggtggagatggcgcgcgtcgtcgccagcgccgccgcgtccgtccgccactcggcgaagaagcgccccaagatgagccagatcgtgagggcgctggagggggacatgtcgctggaggacctgaacgaggggatgcggccggggcagagcatggtgttcggcacggcggagaccgggggcagcatcagcgaggcttccgggtcgtacacgttcgacatggaccggatcattcaggaggcgacggcggcgaggctggagtccggccggcgagacgatgtgtctttctccggcgagatgagcgcggagtggaagcagcctccgcaccgggtgagcaggtag
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| Protein seq | MSIVPPPKSSPPLMAASPSPTNSSSSSSPAPSVSPPPAPSNPHGGGGGAPPPSPARVPSPPSRSSGGGSGSEDVARSALASARRGGYNAMVEIVFAAVGAAALLVLLVAACLCCSRKTAPRRKRKKKPHNPVTHFDADTSGSKGGGGRDTSGPKPPPPPPWLAEPRAAPSTSDAAGMSKGTFTYEQLAAATGGFAEENLVGQGGFGYVHKGVLAGGKAVAVKQLKSGSGQGEREFQAEVDIISRVHHRHLVSLVGYCIAGARRVLVYEFVPNKTLEFHLHGKGLPVMPWPTRLRIALGSAKGLAYLHEDCHPRIIHRDIKSANILLDNNFEAKVADFGLAKLTSDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSYGVMLLELVTGRRPIDAGAADHPWPASFMEDDSLVEWARPAMARALADGDYGGVADPRLEGSYDAVEMARVVASAAASVRHSAKKRPKMSQIVRALEGDMSLEDLNEGMRPGQSMVFGTAETGGSISEASGSYTFDMDRIIQEATAARLESGRRDDVSFSGEMSAEWKQPPHRVSR |
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| Function | Proline-rich receptor-like protein kinase PERK4 [UniProtKB/Swiss-Prot:Q9ZNQ8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_03g0036390 | OsCMeo_03g0036390.01 | Chr03 | 33663962 | 33666379 | - | NAM | ||
| CDS seq | atgtcgatcgtcccgccgccgaagagcagccctcctcttatggccgcttcgccgtcgcccaccaattcgtcctcgtcctcctccccggcgccatccgtctcgcctccaccggcgccgtcgaatccacatggcggcggcggcggcgcacccccgccgtcgccggccagggtcccctccccgccgtctcgctcctccggtggcggctccggctcggaggacgtcgccaggtcggcgctcgcctccgcgcgccgcggcgggtacaacgccatggtcgagatcgtcttcgccgccgtcggggccgccgcgctcctcgtgctcctcgtcgccgcctgcctctgctgctcgaggaagacggcgccgaggaggaagaggaagaagaagcctcacaaccccgtcacgcatttcgacgcggacacctcgggatccaaaggcggcggcggccgcgacaccagcgggccgaagccgccgccaccgccgccatggctggccgagccccgcgcggcgccgtcgacgagcgacgcggcggggatgagcaaggggacgttcacctacgagcagctcgcggcggcgacggggggcttcgcggaggagaacctggtcgggcagggcgggttcgggtacgtgcacaagggggtgctcgccggcggcaaggcggtggccgtgaagcagctcaagtccggcagcggccagggggagcgcgagttccaggccgaggtggacatcatcagccgggtgcaccaccgccacctcgtctccctcgtcggctactgcatcgccggcgcgcgccgcgtgctcgtctacgagttcgtcccaaacaagaccctcgagttccacctccatgggaaaggcttgccggtgatgccatggccgacgaggctgcgcattgcgctcgggtcggcgaaggggctcgcctacctacacgaagactgccatcctcggatcatccaccgcgacatcaaatccgccaacatcctcctcgacaacaacttcgaagcaaaggtggcggatttcgggctggcgaagctgacgtcagacaacaacacgcacgtgtcgacgcgcgtgatggggacgttcgggtacctggcgccggagtacgcgtcgagcgggaagctgacggagaagtcggacgtgttctcctacggcgtgatgctgctggagctcgtgacggggcggcggcccatcgacgccggcgccgccgaccacccctggcccgcctccttcatggaggacgacagcctcgtcgagtgggcgcggccggccatggcgcgcgcgctggccgacggcgactacggcggcgtcgccgacccgaggctggagggcagctacgacgcggtggagatggcgcgcgtcgtcgccagcgccgccgcgtccgtccgccactcggcgaagaagcgccccaagatgagccagatcgtgagggcgctggagggggacatgtcgctggaggacctgaacgaggggatgcggccggggcagagcatggtgttcggcacggcggagaccgggggcagcatcagcgaggcttccgggtcgtacacgttcgacatggaccggatcattcaggaggcgacggcggcgaggctggagtccggccggcgagacgatgtgtctttctccggcgagatgagcgcggagtggaagcagcctccgcaccgggtgagcaggtag
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| Protein seq | MSIVPPPKSSPPLMAASPSPTNSSSSSSPAPSVSPPPAPSNPHGGGGGAPPPSPARVPSPPSRSSGGGSGSEDVARSALASARRGGYNAMVEIVFAAVGAAALLVLLVAACLCCSRKTAPRRKRKKKPHNPVTHFDADTSGSKGGGGRDTSGPKPPPPPPWLAEPRAAPSTSDAAGMSKGTFTYEQLAAATGGFAEENLVGQGGFGYVHKGVLAGGKAVAVKQLKSGSGQGEREFQAEVDIISRVHHRHLVSLVGYCIAGARRVLVYEFVPNKTLEFHLHGKGLPVMPWPTRLRIALGSAKGLAYLHEDCHPRIIHRDIKSANILLDNNFEAKVADFGLAKLTSDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSYGVMLLELVTGRRPIDAGAADHPWPASFMEDDSLVEWARPAMARALADGDYGGVADPRLEGSYDAVEMARVVASAAASVRHSAKKRPKMSQIVRALEGDMSLEDLNEGMRPGQSMVFGTAETGGSISEASGSYTFDMDRIIQEATAARLESGRRDDVSFSGEMSAEWKQPPHRVSR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.146391 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0226901 | SBH | 0.0 | 0.000000 | 7.461071 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g56470 | RBH | 1.225712 | 1.749558 | 0.180093 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0226901 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0036640 | RBH | 0.508370 | 0.000000 | 1.192501 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0036310 | RBH | 0.684219 | 0.530278 | 0.217983 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0036680 | RBH | 0.296711 | 0.029029 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0036190 | RBH | 0.820258 | 0.0 | 1.220637 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0548600 | RBH | 7.564283 | 4.5204405 | 2.07341 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0035990 | RBH | 0.206126 | 0.156791 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0549400 | RBH | 8.905863 | 5.625362 | 4.5109635 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0036480 | RBH | 0.096771 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0036490 | RBH | 0.329489 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0036140 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0036230 | RBH | 0.315812 | 0.0 | 0.448182 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0036190 | RBH | 0.896041 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G035980 | RBH | 0.154363 | 0.0 | 0.649481 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0035760 | RBH | 0.286510 | 0.000000 | 0.580273 |
