Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_03g0022400 | OGI:03047920 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr03:18534294-18544982 | ||||||||
| Gene Symbol | OsTPS14 | ||||||||||
| DNA seq | aaataagatcacatcaaatgccaaatattatttttagcaattcatgctacaaacactcctctgcataaggcagcaatgtcgagattgaaatgaagaaatacaaacatcactacaaggaaaatgacaataaagcagcaatgagctgcttacataggatcatccgaagcaagcttggatacacgattattcataatagagacactctgatcaaaatcaaattaaagcgaagtcatatgatggaaacctagagtgttattggctgaacaagcaacaaggatatccattctttcagtattgcagaatcagtatatccatcaattttcttgtacattgtttccatcatgcgtgcaaggttaataacctggataagcaaggaagacggaattgaggtcaattttaggtactcctcgttcatatctttccatgcattttccacatcattccacagtgctttaatggcctcctcctttgtgctgtcatactctttcatatagcaagttacagcggtagcaacattgttcctttcggtctcaaactacaagcaaagtaaagcatcacatgaagttccaatctctagcacaaaagcaagcaaaaccaaacattgtgaaaaatttagtttttagaacatctaaataacaattatgtttggtgcatttgtgggagatgctttctctccaaaaaaatgagaaaatgttttgtgtaTtttggaaaatatgtcctatgcactagatgaaaaaggaaaaaaagtattaaacacaatacagagtataagattaccgcatgagcaacaatgtcatccattagtcgagaaacaatacatgaatccttgacaatttgaggaaatcctgacatccatatcataacctcctctgtaacaccttcttgaaaaacaacaaaagcagtgcagtttattgcccaatagaagcacgtaactagtgtgatttgcaaatgctcctttaatgggggaatgtatttactatctctccaatcgatttctgttacatagcctttgcatacttcagtgatctataaaataaagtaagtcaaagcatatgtacatgagtgggctctttgcatatgtattttcaaaacacttaataataaactaatttactttaataaaataaacatgtcatgcatgaatacacacatataattgaatggatggaatggtgtaattaaaaggaaaaaattacaaaaaaaactgagaatatacatactatatctttgataacattaacattcttccttggtgttccttttgggagtgcaccctcaatctcattcatggtgccaaacataaattgagcatattccttgtaacatcttccaagttgctcagcacccttttcatcccacctataagaaattatcatggggaaacatgtacaagatattcatagagatatcattgacttagttatgtcaatgcatatgtgtggaccatgaaaattacaacttaaatcaatcctaactttaaattataTttgataagtataaagctgaaacttgcttaatattattttctcaaagtgtgatcgggatgtggaacaaaaccgttgcatcacgtcagcaaatggttgaagctctttccagagtccataattgtcaaaagtatcatcatatggtgtaatagttgctatgaatttcgctagcaacttcctaggctttgcatattctggttcataatacacacccaacgcccaaaaatatgcttctgcaggcctatgccttgcatagaatagttcacgtggggactctagcccatgataccacctttaaaacagaaaacaaagaactgaatcatcaatgtcttattatatggtaatggaaatattcgttataaatttccaccaaattaacttactcgcatatttctttgacttcttcccggtgaagtcgctgcaataaataaaagtcaagttttgctagctcaagtatcatctcgttgcactcctccttatcttcttcatacaatggtatgtaaagtctggcctctaacctcttcatcctacggaaagatggtgtctcaagagcatgtctcactttattagagagtggtttctcaatacaatccacaattcttttcaattgatttgttgtttcaacctgtgcttctcggagaatttcttcattaggagttccaagatgtgctgcctcatatagagcaagtaatgctcttgtatcactacatagggttccgtttaagtttccttgtttatcaatgaattctttaaatgcatctgatcacgattgatacaaaaatgttagatgagaatataaccacctaacacacaaaatttcaagccaacattttatatgtgacatgtagaactgccagatagagtgttaattagacattttcataaatttcttcacaaggtttaaagaataaagaattatatatccatccaaataagctgccacaaaatactcatcgaaatatttagatgatgagtggaaaacacctttacatacaagtcctttttgccaaggaaaaaaaagttatgttacaattttatcaactatttgagaggctttatcttttaaatttgtaattacataccacgtaagaactcaattttctacctacaaaatgttgcgttgaggatttgattcattatccacattaactagctcccatgtggagtggcacatcgcttatatttttgttcgctttgtttaaaaggattgactgattgactgtactatggttatagccggctcccacgggcttataagctaagcctcaccaatatgaacatccaaggtggtattaaatcaaccagtacaacattttgtggcccacatggacctcagcaccactactacaagcgacacatgtattagggttttacaagtagcagtctagttttccaaacaattaacgtgatcaaccagtaattgtgtacattttgtaagatatgaaaattacatgtctctgataaacttatggaaaaacatatatattctatcaaaatgattgatatttcaactatgacctgacattttacatgaaattaacctacttccacttgagttatagttaaataaaatagtgcagcagattgttatagcagttagatgatttgaaagaaaatatgtgattttgaaaatttatagcaatttaatctataatagaattttataggtcatatatatgtaactctacaatgaattcaacttcctgaaggtggttttcaaaattattgcatctcaaataaatagatatagggaagaaacgataccgcatggcatgtagcgccgctgctgtcttagcaaccggaattgaagggagatcgcatggaaatcatcattcgcaaacttcacagaaactagactttctagggagttatctatttcttctttaaaatgataagatactccaagacgttgaagtgcatcgataagcttcatttttgcaaatggattgaggatgtctacaaacatttcccttgtttcaactattaggtcatcacatctttccgtcatccactccagtgatttctgtacacagcaaatggttaccaatatgagatacactatatattgtgccgccatagaaagctggctagctatgtattattaatgcataactatgAaatgtgtaaacaataatatatgctaagtaattacatttttgttgatattgatttacaagatgtatggaaaagtaacagtggcagtggattatacactactagacaaccgatctttgctcaatcggcaaaacaacaaatatctcagatgtttaacggaccagtgctaaagacctctttagcaccggttaaaacacccaacgacacattgctatctttagtcctgattcacactttgtcagagcatatcaagcctcccaggatatttagcaccggTttgtggcaacaaccagtactaaagatcgacattttagtaccggttgatgacacaaacgagtactaaagatcattgcctttttatgctcttcttcctcctccagcccgagccattgctactagtgaaaggaggagaaagagaggtgctgccaaaaTtttttgtgaaaatattttgatattatacaaatcaaagagatctaaaggttagcaacgtcatcctctattgatgcatagttaacattttacatttcttgctatgtttgtatgcattattatctcaataacatatatggaaaaaagatgagagataaaaTtttctttggggaaaattagtgtacttcataaaattagaaacatttgtataaatttgttaaaaaaacaacaaacgaaaaatatagaaaatgaagaaaaaaataatcgaaaactaagtccatttgaaaatcattaaaatagttagaaataagtagaatgcattaaatatatgtctagaactttaaaaaataattaaaataaggataatacatggaaaaatatatttacaatttcttgagacagataaaatttatacataattaactatgactccaattaagtgcacttaaaactcgttaaaatcattagaaataaaaagaatacattaaaaatgtgtaccatcagttttcagtttaattatgatgttttaatttattatataactatttaagtagtttcactttcatagacttcctttgcatttggtatttcctcatgtagatgaatcggtaatggcgtgcattattttttgagcgtggccaatacccacaagcctaatggttttattgatagcgtgcattattttttgagtaaagtgcattggcggtccttaaacttgtagggttgtgtcatataggtccctaaactctcaaaatgcatttccaggtctcagagcttgttaaaatatatcatctaggtcccaaattgacacatcccctctaggatcctacgtggcgctgatgtggcaatgccacatggacgtgatgcgtccttttcttttttcttcttcttttctttttctttttcgttttcttctcattcttcttttttccctttttttttctgcacgggtcacagagaaaggagaagaaaggggaaaaaagagaagaaaaaaagaaaaaagaaaaaatgtcagtcaaaataatgctatgtcatgtccgtatggcatgccacatcaacagcacgtaggatcctgaaggggttgtggcgatttgggtcctagatgatacactatgacaagttttgggatttggatatgcattttgagagtttagggacctagatgacaaatccctacaagtttaaggaccgctcgtatactttactcttattttttttagtgtggccaatgcccacaagcctaagggttttatatgttgtccatgcaaataatgcaaaactagaaggagtattctacatcaagaactcttcatatctacttgttggagtcgggattcatgccagctataattgttggacttcacacggagagttagggattgcaatggaagaagaTgaagaagaagacgacaactttctagactggacacaatatatgtatgttacttacaaatataaacatgtatattacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacatatatatatatatatatatatatatatatatatatatatatatatatatatggaaaagcaaatatcaaccaaggttcatatgcaccacaaatctcagccgttcagatgttccaagatgcgtgtccaagctgttaaaagttatcacaattgagtggtacttgggaaagagttaatcccttaattgctaaagcagctcgttatggtgcatatgtacagggtgacaagtatggctatgttttgtcttgtcactgatttttttgaccaagtagaacaggacattgcacggcttcatccataaataaagacatgacaagcttagtggatgtgattggggttgagtcgagagcattggtaagagtaattttataaatttgtttctaTttttgggtgagtgaatattgatagttaattagttgctataactaattttgcatgtccgatgctattcttaaaactggctttttactgatcATatatatatatatatattaatctattagtgttaacttgctataactgatatttTAAtgctatatactgatttcacatgtgaatattgtttcttttcttttgttatccatggaatttcagtatacatgaccattttggaaataacacacatgtgaTtttttaaatttcgacacatgccaagtatatgatatcattttgcgacgtcatttttttatacctcacttttcaaaatgataTtttcgttgtatttcatttttggtgtcaacaaattgtagtggacgttattttctttgtcgattacggaattatattttgcaatgtagcatatatatgtaaaaataaaaataatgtgTttcttaattttaatatatgccaaatgatatatcattttttacaacgtcggttatattgtaactttttcaccatgatacaacgaatctggtcaaaagctgattagacttttttaatcagatttatataatatttgtaacagtttatttttgacattctgtactgcaactataattttttatcaaaaggcacattatcaataattttttaaaacggaggggaggcagaggtttttttgtcatgacattttttcctgcaaagaggtacacctgcggcacgtgcagtcattacattttgcattcatatcgcgcatgtgtggggtcgccgtatagcagcatgagcaagggcaaaaattgagaacgcaacatgtaactatctaaccctgcaacacacggctgtatataggggctccatgggggcaggtacatctttgatggtggttactagacataacgagccctagatgtacaagaacatgtgtacacgtgtcgctcaaaggaatgaggtgcatatacacctcggttcacattatatgtatatatatatagatatatatatatatatagatatatatatagatgtagagatagagacatacctatatggatagacatagacatagaggtagggagatatagataatagatagagagatagagggatatataaacagacagacagacatagagacatatacatacacatatatatggaggtagaggatatggagagggataatatagagaatagatagagagagggagggagggagagagagagagagggagagggagagggagagagagagagagagagagagagatggagggagagagagagagagagggagagaggagagggagagggagaggagagggagaggagagagagggagagggagagggaggagaggagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagaggagagagagagagagaggagagagagaggacggagagagagagacggagagagagacggagagagagaggagacggagagagagagacggagagagagagacggagagagagagacggagagagagaggagacggagggagagagagagatagagagagaaggagacggagtagagggagagagagatagaggagagggagagggagagggatagggagagatagagagagagagagagagagatagagagagagagagagagagagagatagagagagagagagagagagagagagatagagagagagatagagagagagagagagagagagagagaagagaggaagagatagagatatagagatatatatatatatatatatatatataaatatatatatatatatatatatatatatatatatatatatattggcatttacacacacacgtatatgtgtgtataagaaatcgtcaagcaatagcaagcattttttttttaaaaaaatatatttagtactggctggtaacacttggcgctaccatcaccaactggtactaaagatcgatttttagtcctgattatttcagccatttaaaatacctatctgtagtctcggattgtgcgtcccggtatcacaatcggaactaaatggggttgcgaaCcggtcttaaagatcgattccctagcagtgataggaaacacgctatcttgagtcaaaaatatgcacatattgaacatggtcatggtcctacccacaaatattacacacaagtgagtgtgctcacaagtgtgtgtgaccatgtgtattcttataatattgctcttaccaaatacaggggtggagctatgcgagttgagggggggggggtgcgtaggaacctggttcaaaaatatttttttgctacagttcatatattttcaccatatgtgtgccccttagttgaaacttaggcacttgcttcaacctaaacttggtccaaaggagagtaaaacaagcgagaggcactccctccatttcattctagctcctctccaaaccaaacattgtaaaagaataactttattgtgcaatataaatatttggtaaaatttgtttaaagatgctctagatttgtggtatacactttaggacactcttgttttgtggataacataggatatcgaactatagctaagcttagttttgtctagctcgtttggataatgagttagctagctcatctcggccattatttcaataagctagaaggcgagctaggctcagcttgtttgctatcttgagccagcttgtttagctcacgggctagcacattcaaatcaagaatctacagaccatattgatatgcaatctaagttcaagtgtgcaaatgtttgcatataatctaagtaccactccaacaagcaaactagcaaatacaaaggttcaatcttcacacgtttagaagtccataaaagtatatacacatattcagtacataatctgtatccataaatcaggtccattcatatcatccatgtctccatgcttctgttccatggcaacacacaaaatgcaacagcaaaacaactaattacttgtccagtaatgatggctgtcatataCccctagcTtgttaagctcgcgagcagcttgttatggctaacaagtcgaaacggtacgtagcttggctcattaggaaaacacaacgagctgaattgagctgagccaagccggcacgagctgagcgagctaatgagccatgagattttggcactacaaaattaacactctgaaagtattttccaTtacaaatctaatgatacaatatgatggtaccactacggaagaagtgatctttgttgggattgcaaaaatcacattagtccctgttcgaataggaaccgagactaaataatatgtttagtcctggttcataagtccaatggtactttatgatctttagtcctatggcactttatgatctttagtcccgattggtaaagatcatttttacttccggttattaccaaccaggactaaatatctctctcccacgtccttacattgggatgctttagtcctaaccccacgacaattgacccagaaaaaagagggagattgagacccacacgtcctttattatctctttcgctctctgtctcctcgagtcctcgcctctttctcctcaatctcgctcgctctctatgtcgatctcctcCTCCCTCTCTCTCTTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCAACGGCCGGGCTAGGCGGCGGCAACGGCCGGGCGGGAGAAGCGGGGACGGCGACAACAGGGTGGGAGATGCAAGGCGGCGATGGTGATGGCCTCGCCCTCCCCTCTGCCAGCTCCGGCAGGAGGGGAGGCGGTGGCGGCGGCTGGGCAGTAGAAGCGGGGGCGGCGGCCTCGCTCTCCCCTCCACCAGATTCGGTGGGAGGGGAGGCGACGGCAGCCAGGCGGGGACGGCAACAGCAGGGCGGCGGTGGAGCGATGGCGGCTCGACGGAGGAAGAATTTGTTTTCTAGGAATTTGTGATGATTTTTTTTAGAATTTGTGATGTATTTGATCTGTGATGTATTTGTGATGTTTTTTTTAGAATTTATGATGTATTTTTTTAGAACTTGTGATGCATTTGATCTGTGATGATGTGAATCTGTGAATCTGTGATTGTGAATATGTGATTTGGGGATTGtagggagcaactcgattggggaaattaatgtgcaagcagtaaaaattaatgaaaaaaaagaataaaaacatttagtcccaactggtgttaccacccggtactaaaaatgaatctttagtcccgattatttcaaccgaaactaaagatgggtatgcaatccggaactaaagggggttgtaaaccagaactaaagatgagTtccccagtagtgtacaaccatctatttctagtttaattacctgttaattttgaaatattaactttgcagaaaagtacaacttatattctagaacagaacagagatgtatagtttcgaacaaagagagtacccgatagttatgaggcagtattgggttcctaatgaagtagtcaccccacacactcgacctatagtttacagcgtggcgctcctcatccaccaccctatatccttgtgcgatcactctgccggccatgttgttctctgccagctgatctatatgaacacttacgatgtactctctctgtggctgaactaacgaagctagctagctacgcct
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| CDS seq | atggccggcagagtgatcgcacaaggatatagggtggtggatgaggagcgccacgctgtaaactataggtcgagtgtgtggggtgactacttcattaggaacccaatactgcctcataactatcggaaatcactggagtggatgacggaaagatgtgatgacctaatagttgaaacaagggaaatgtttgtagacatcctcaatccatttgcaaaaatgaagcttatcgatgcacttcaacgtcttggagtatcttatcattttaaagaagaaatagataactccctagaaagtctagtttctgtgaagtttgcgaatgatgatttccatgcgatctcccttcaattccggttgctaagacagcagcggcgctacatgccatgcgatgcatttaaagaattcattgataaacaaggaaacttaaacggaaccctatgtagtgatacaagagcattacttgctctatatgaggcagcacatcttggaactcctaatgaagaaattctccgagaagcacaggttgaaacaacaaatcaattgaaaagaattgtggattgtattgagaaaccactctctaataaagtgagacatgctcttgagacaccatctttccgtaggatgaagaggttagaggccagactttacataccattgtatgaagaagataaggaggagtgcaacgagatgatacttgagctagcaaaacttgacttttatttattgcagcgacttcaccgggaagaagtcaaagaaatatgcgagtggtatcatgggctagagtccccacgtgaactattctatgcaaggcataggcctgcagaagcatatttttgggcgttgggtgtgtattatgaaccagaatatgcaaagcctaggaagttgctagcgaaattcatagcaactattacaccatatgatgatacttttgacaattatggactctggaaagagcttcaaccatttgctgacgtgatgcaacggtgggatgaaaagggtgctgagcaacttggaagatgttacaaggaatatgctcaatttatgtttggcaccatgaatgagattgagggtgcactcccaaaaggaacaccaaggaagaatgttaatgttatcaaagatataatcactgaagtatgcaaaggctatgtaacagaaatcgattggagagatagtaaatacattcccccattaaaggagcatttgcaaatcacactagttacgtgcttctattgggcaataaactgcactgcttttgttgtttttcaagaaggtgttacagaggaggttatgatatggatgtcaggatttcctcaaattgtcaaggattcatgtattgtttctcgactaatggatgacattgttgctcatgcgtttgagaccgaaaggaacaatgttgctaccgctgtaacttgctatatgaaagagtatgacagcacaaaggaggaggccattaaagcactgtggaatgatgtggaaaatgcatggaaagatatgaacgaggagtacctaaaattgacctcaattccgtcttccttgcttatccaggttattaaccttgcacgcatgatggaaacaatgtacaagaaaattgatggatatactgattctgcaatactgaaagaatggatatccttgttgcttgttcagccaataacactctag
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| Protein seq | MAGRVIAQGYRVVDEERHAVNYRSSVWGDYFIRNPILPHNYRKSLEWMTERCDDLIVETREMFVDILNPFAKMKLIDALQRLGVSYHFKEEIDNSLESLVSVKFANDDFHAISLQFRLLRQQRRYMPCDAFKEFIDKQGNLNGTLCSDTRALLALYEAAHLGTPNEEILREAQVETTNQLKRIVDCIEKPLSNKVRHALETPSFRRMKRLEARLYIPLYEEDKEECNEMILELAKLDFYLLQRLHREEVKEICEWYHGLESPRELFYARHRPAEAYFWALGVYYEPEYAKPRKLLAKFIATITPYDDTFDNYGLWKELQPFADVMQRWDEKGAEQLGRCYKEYAQFMFGTMNEIEGALPKGTPRKNVNVIKDIITEVCKGYVTEIDWRDSKYIPPLKEHLQITLVTCFYWAINCTAFVVFQEGVTEEVMIWMSGFPQIVKDSCIVSRLMDDIVAHAFETERNNVATAVTCYMKEYDSTKEEAIKALWNDVENAWKDMNEEYLKLTSIPSSLLIQVINLARMMETMYKKIDGYTDSAILKEWISLLLVQPITL |
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| Function | (-)-germacrene D synthase [UniProtKB/Swiss-Prot:Q6Q3H3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_03g0022400 | OsCMeo_03g0022400.01 | Chr03 | 18534295 | 18544982 | - | NAM | ||
| CDS seq | atggccggcagagtgatcgcacaaggatatagggtggtggatgaggagcgccacgctgtaaactataggtcgagtgtgtggggtgactacttcattaggaacccaatactgcctcataactatcggaaatcactggagtggatgacggaaagatgtgatgacctaatagttgaaacaagggaaatgtttgtagacatcctcaatccatttgcaaaaatgaagcttatcgatgcacttcaacgtcttggagtatcttatcattttaaagaagaaatagataactccctagaaagtctagtttctgtgaagtttgcgaatgatgatttccatgcgatctcccttcaattccggttgctaagacagcagcggcgctacatgccatgcgatgcatttaaagaattcattgataaacaaggaaacttaaacggaaccctatgtagtgatacaagagcattacttgctctatatgaggcagcacatcttggaactcctaatgaagaaattctccgagaagcacaggttgaaacaacaaatcaattgaaaagaattgtggattgtattgagaaaccactctctaataaagtgagacatgctcttgagacaccatctttccgtaggatgaagaggttagaggccagactttacataccattgtatgaagaagataaggaggagtgcaacgagatgatacttgagctagcaaaacttgacttttatttattgcagcgacttcaccgggaagaagtcaaagaaatatgcgagtggtatcatgggctagagtccccacgtgaactattctatgcaaggcataggcctgcagaagcatatttttgggcgttgggtgtgtattatgaaccagaatatgcaaagcctaggaagttgctagcgaaattcatagcaactattacaccatatgatgatacttttgacaattatggactctggaaagagcttcaaccatttgctgacgtgatgcaacggtgggatgaaaagggtgctgagcaacttggaagatgttacaaggaatatgctcaatttatgtttggcaccatgaatgagattgagggtgcactcccaaaaggaacaccaaggaagaatgttaatgttatcaaagatataatcactgaagtatgcaaaggctatgtaacagaaatcgattggagagatagtaaatacattcccccattaaaggagcatttgcaaatcacactagttacgtgcttctattgggcaataaactgcactgcttttgttgtttttcaagaaggtgttacagaggaggttatgatatggatgtcaggatttcctcaaattgtcaaggattcatgtattgtttctcgactaatggatgacattgttgctcatgcgtttgagaccgaaaggaacaatgttgctaccgctgtaacttgctatatgaaagagtatgacagcacaaaggaggaggccattaaagcactgtggaatgatgtggaaaatgcatggaaagatatgaacgaggagtacctaaaattgacctcaattccgtcttccttgcttatccaggttattaaccttgcacgcatgatggaaacaatgtacaagaaaattgatggatatactgattctgcaatactgaaagaatggatatccttgttgcttgttcagccaataacactctag
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| Protein seq | MAGRVIAQGYRVVDEERHAVNYRSSVWGDYFIRNPILPHNYRKSLEWMTERCDDLIVETREMFVDILNPFAKMKLIDALQRLGVSYHFKEEIDNSLESLVSVKFANDDFHAISLQFRLLRQQRRYMPCDAFKEFIDKQGNLNGTLCSDTRALLALYEAAHLGTPNEEILREAQVETTNQLKRIVDCIEKPLSNKVRHALETPSFRRMKRLEARLYIPLYEEDKEECNEMILELAKLDFYLLQRLHREEVKEICEWYHGLESPRELFYARHRPAEAYFWALGVYYEPEYAKPRKLLAKFIATITPYDDTFDNYGLWKELQPFADVMQRWDEKGAEQLGRCYKEYAQFMFGTMNEIEGALPKGTPRKNVNVIKDIITEVCKGYVTEIDWRDSKYIPPLKEHLQITLVTCFYWAINCTAFVVFQEGVTEEVMIWMSGFPQIVKDSCIVSRLMDDIVAHAFETERNNVATAVTCYMKEYDSTKEEAIKALWNDVENAWKDMNEEYLKLTSIPSSLLIQVINLARMMETMYKKIDGYTDSAILKEWISLLLVQPITL
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_03g0022400 | OsCMeo_03g0022400.02 | Chr03 | 18534295 | 18544982 | - | NAM | ||
| CDS seq | atgataatttcttataggtgggatgaaaagggtgctgagcaacttggaagatgttacaaggaatatgctcaatttatgtttggcaccatgaatgagattgagggtgcactcccaaaaggaacaccaaggaagaatgttaatgttatcaaagatataatcactgaagtatgcaaaggctatgtaacagaaatcgattggagagatagtaaatacattcccccattaaaggagcatttgcaaatcacactagttacgtgcttctattgggcaataaactgcactgcttttgttgtttttcaagaaggtgttacagaggaggttatgatatggatgtcaggatttcctcaaattgtcaaggattcatgtattgtttctcgactaatggatgacattgttgctcatgcgtttgagaccgaaaggaacaatgttgctaccgctgtaacttgctatatgaaagagtatgacagcacaaaggaggaggccattaaagcactgtggaatgatgtggaaaatgcatggaaagatatgaacgaggagtacctaaaattgacctcaattccgtcttccttgcttatccaggttattaaccttgcacgcatgatggaaacaatgtacaagaaaattgatggatatactgattctgcaatactgaaagaatggatatccttgttgcttgttcagccaataacactctag
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| Protein seq | MIISYRWDEKGAEQLGRCYKEYAQFMFGTMNEIEGALPKGTPRKNVNVIKDIITEVCKGYVTEIDWRDSKYIPPLKEHLQITLVTCFYWAINCTAFVVFQEGVTEEVMIWMSGFPQIVKDSCIVSRLMDDIVAHAFETERNNVATAVTCYMKEYDSTKEEAIKALWNDVENAWKDMNEEYLKLTSIPSSLLIQVINLARMMETMYKKIDGYTDSAILKEWISLLLVQPITL
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_03g0022400 | OsCMeo_03g0022400.03 | Chr03 | 18534294 | 18544977 | - | IsoSeq | ||
| CDS seq | atgtatattctcagttttttttgtaattttttccttttaattacaccattccatccattcaattatatgtgtgtattcatgcatgacatgtttattttatta |
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| Protein seq | MYILSFFCNFFLLITPFHPFNYMCVFMHDMFILL |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| RI | Chr03 | 18535071 | 18536069 | - | OsCMeo_03g0022400.03 | OsCMeo_03g0022400.03,OsCMeo_03g0022400.02 | All |
| RI | Chr03 | 18535514 | 18536069 | - | OsCMeo_03g0022400.02 | OsCMeo_03g0022400.01,OsCMeo_03g0022400.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 17.572079 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0428200 | RBH | 0.0 | 0.0 | 0.585891 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g31430 | RBH | 0.0 | 0.0 | 0.083664 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0428200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0022470 | RBH | 0.0 | 0.0 | 14.436510 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0022330 | RBH | 0.0 | 0.0 | 3.128314 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0022380 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0022180 | RBH | 0.0 | 0.0 | 46.237759 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0294800 | RBH | 0 | 0.0129345 | 0.0453325 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0021920 | RBH | 0.000000 | 0.0 | 1.626449 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0298200 | RBH | 0.0305495 | 2.801477 | 0.044327 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0022220 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0022210 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0022320 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0022160 | RBH | 0.0 | 0.0 | 1.030971 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0022010 | RBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G022000 | RBH | 0.0 | 0.0 | 8.216228 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0021910 | RBH | 0.0 | 0.0 | 8.092486 |
