Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsCMeo_01g0014580		OGI:01035810 \| 16/16			CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)			Chr01:12441360-12449180		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		SRP20, Os-SR40, OsSR40, SR40, OsSRp20, Os-SRp20, -
DNA seq		ATGGCGGCTGAGGCTTCCAATGTTGAACAAGTCGAAGATACAGACAATGAAAATGATGTTGTGATAGTGGGCAGTCGTCAAAGAGAAAGATGGGACATGAAGGAATCTAAAGTACGCTCGGCAACCAACGATCACAAATATAGTTCCCTTCTCTCGGTGGTTTCTGCTATGAGTTTATAGGAGTTGATAGGCGGCCTTTTCCAGTACATATAAATAAATTGTGCCGAAACCTTGGAGTAAGCCACTTCTATATAATATATCTACCCCATAGTTCAAAGATGCACTAACTTATTTTTTTTATTGATTGACAGGAATATATGGGTGCAAAGTTCACGTCCGCACACCATAAAATTAAGTCTCAAAACACTTCAAACAGTACTAAAGGATGGACCACTTGACCGTGATTGCTTCAACATGGCCATACGCAAGTTCATGTATGAAAACATCCAGTCGCTTCACAAAACCAGCGAAGCAATAACGAAGCATTGCCTGGACTTACCATTTTTGGTAAGTTTTTATAATCTACCCAATATTGATTCTTTTGCTCATATTTTAAACAATTATTGTACATCATATAGACTGCTACTGGATTTGGTATAAGTCCGATGTTCCATAAGGATATAGATCTTGCAGGGTCGGTTGGTAGCTGGTCGAAAATCCATTATGAAGTTGCAAAATGCAAATCGGTAAGCTAACTATCCTTTGTTCTTATTTGAATGTGTTTTTTATATTATCTTGACGGTTGACTTTTTCCAGATTCTTATACCAGTATGTGCTGTTGGAAGCTATATCTTGGTCATACTGGACCAAGAAAGCAAAACACTTTATCTTCTAGACCCTAATCCACTAAATCCAATGTATCTATGAGATATATCAAAAAATTGTTAAACGTTACCAACTATTTCAACAGAGCCATGCGTGTGGCATGTCTTGGCTCTAGGTGGACTGAGGATATCGACTTGTGGCGCCATATATATGTCACAAATCCGGTGGCTAACTCGTAAGTTTTCTTGTAAAATCTTGTTTGATCCAATAAATTATTTTTGTCTAACGCATGGTACCTAACTATTCAAATTTCATAGGAATTTGTCGGGTTGTCTCGTACATCTGTTCATGCGATCCTGGAAAGATGGAGCACTTCATTTGCCGTCTTTTAAGGTCATTCTGACTAGCATTGACATTTAGAATATTATATTTTATTTTATAATACAATTATTTATTTTATAAACATATACATTTGCAGGATGTTGACGAGCTAAGGAAACAAATTTTTGCTATATATATTGATGTACGAGCAAAATGAGTGCGCAAGCAACGTTCCTAGCGGCGCACGAGATTTTCTTCACTGTATCGCAAATGCAAAACATTAGAATAGTCATTCTTTACCTATGGGGTGTATTCTATACATTACAAATGCTTTATTTAAATAATAGAATAACTCTATACTTCTCTAACATATTTTTCTGCCCGCAACAAATAATGGAATAACTCTATACTTCTCTTACATATTTTTATACGTATATTGCCTTTTATATTGTGTACATAGGGTATATTATATATAATTAAGTCTGGTAAAGTTTTACTGTGCCCACGTAATATCATAGTACTGTACTTACATGAAATATATTTAATGTACTATATGAATTTAATTAAAGTTTAAATGCACAGATCATATAAAAATATTTTTTGGTAACATGAAATTTTTTTAAAGATACAGTTAAATAGAATTGCACCGTAGCATTTAGCACGGACATATTACTAGTTACATTAAATATTAGTCAAAAAGTTGAATTTTGAAACGCCTTATATCATGGATGGAGGGAGTAATATTATTGATTTATCCGTCGCTTTCGAAATGGGCACCACGCACGCATCTCAAAGCCACACACGCGTCTCCACAACACGTCCCTCCAGGTCCAACCCCACCACATGTATCGGTTTCTCGTGGGCGGCCAGATTTTTGTCGCAGGTCGGTTTCGTTTCCGCTCTCCGCTCCACGCGGCGTCGCCTCCGGAGCCCCCAGAAGCTTCTCGACCCACCACCACCGCTCTCCCTCTCCCCGTCAGGTGCGTTCGTCGGAAATCATCGGGAAAAACCCCGAAATCCTCTCCCAGCTTTCCCTTTTTTTTTTCCCTTCTTCTCCGCGCGCGTGTTCTCCTCGATCTCTCCGATCATCATCGCGTGTGGTGGCCGATTGGCTGCGGTTCCCTTCCCGGAAATTCTGCGGCGCGCGCCGCCATTTTTATCCGTCTGTCTACAGGGTAGGGAGTTCTCAGATTAGAAACCAGGGGTTCTCCCGTTTTGGCGCTAGTTATGGTAGAGATTTCGTTACCTTTGCATATGCCATGGCTTCGTCGGCTCTATGCACGGAGCCTATGTATGTATGTATGTATGCTTTTATTTTTAAGTTTGTCTCGTCTAGAGTACGCGGTGGCGATGGGAAACAGCCGCTAGATTTGTTTATTGTTTCTTTACCCTAATCACAGGTATGGGTATTTGAGATTAGTTACGAAACATCTTAGATATATGCGGCTATTCAGTTTTTTTTTTTAATGTGCAAGAATCCAAAAGTCTATTAATTAGCATGTAAAAGGACTTGTGCTGATAAATTCTTTAGTTTTTAGTACAAGTGTCTGTATCTAGTTTCAATACAAGTTGCAATCCAGACTACGTTAATAACACTAAAAGATTGTATTGATACAAATCCATGATTATTATGGCGCATTGAAGAGAGGAAACAGAGGAAGGTAGGCTTGTCCTGCACGGCTTGAAGCTCTGCTTGCCTTGGCCAAGGTTTGGACAGAGGCCCTTTTGAGTTCTATACACTGGTTGATTACTCCCTGTTACAAATCTGAGCAATCTTTATCGACGAGGGCCTAGCTAATAATCAGGAAAAATAGAGATAAAGTGGAAAGTAGATAACAAACGCCAAACTAGGAAATAGATGACTGCATATCTTTCAGCCGGATATGGTCCCTCCTGCTGTAGGCGCGGACCCAGAATGCTTGTACAGCTGGTATTTATACCTATTTGGCAGGTAGATAATGATGATTGAACATGGTATTGGTGCTTTGGGTGACAGTTAAATATTTCTAAGGAAATCACTGCACAAATATCATTTTTTTTGTTTGGGAAATATCTTGTTTTTGTTTTGAAAAATTTAAAGTTTATGGTGAAATCTCTTTTGTGCAGCCTTGGTATTATGTAAATCTCCAAATTCTGTAGTTTAGTGTTATACTGTCGAAATTTGCCCTTTCCCCAATCTTTGCTGTTGTTTGACAATATGCGCCTACACAAAATTAGTACAGTGCTACGCTCCTTTGTGCTTGAAATGTTTCCCCATATTATTTATTAACAGAATCTTGAATTTACAAGGTCATTTTATCTTGCATATTTGCATCTATAATTTTAGTTGACCTGCTTTAACTCCTATATATGCAGAAACAATGAGCAGACGCAACAGCCGCACCATCTATGTAGGCAATCTCCCTGGGGACATTCGTGAGAGGGAGGTTGAGGATCTCTTTTACAAGGTGAGCTTTACTGCTTTACAATCTACCTCAGTTCTTCTCATAAGCAACTACCATTTCAATCTGGTCGTAGCTGTATAGGCATAATACATTGCTTATTTTCCTACCTGTTAAGTTGCCTTAGCTTATTAATGTGAGAAATAGCTAGCGGTTGAAGGATTTAAATCACTATTATGCTAGTGGTTGAAGGATTTAAATAATTATTATTATAGTATTATAAGAGTTATAAAGGATTATTGTTCTGTAATTCGTGGATGAGTCTAAGGGTAAAGCAATTGCGGGAAGAAAGGAACCATCTGGCCTTGTGTCGCCAAAGAAGCGCTATTTAGGAAGTTGTCTTGTCTGTATTAAATATCTGTTGGCTGTTTCAACTTGCGATGTCTTCTCCTGCTGTTTTGGTAGTGAATAATCATTTTCTTAATAGCACAACCATTGATGCTCTTGAGCATCCATCAGCGTAAACAGTTGGGTGTGATTTATCCTAGATGACAACTGATAACCTGTGTGCCATTGCGAAAAAGTAGTCATATATTGCAGATGGGAACGTGTTGACAAATGATATATTTCATGAGTCATATTCAGATTAAGGGTGTTGTATTTGTACTTATTTTCTAAGCTAATGTGGAGGTGCAGTTGTGAAAAGTTTCACTAATAAGTCCAATTAAGTTTATGTATATATGTTATTCCAGTGTTTTTATCCCTTACAATTGCAATAAGAACCTTAATCTTGATAACATGCATGCTTTTTTTTCTCATAAATTTATTCTAATGCAGTACGGTCGCATTTTGGACATTGACTTGAAGATTCCTCCAAGACCTCCTGGTTATGCTTTTGTTTAGGTGAGTGTCCTTTTGCAACAGCCATGTCTTCTGTAAGGGTACTTGTATTGAAAATTTTATTGAAATTTATAATATAGTCCCTATTATTACCCTGATATTAATATCATTTCTTCTTTAAAGGATGGTTGTTTTCAATAAAATTTACTTCTAGATTTTTTTCAAGACTAAGTTTTAGTTTAGGTATAGCTAAGTTTTCTTAAGATGTAAGTGCATCTTTTAAGATGTATAGCTAAGTATTGGATGCTAAATAGCTAATAGAAAATATGTGCTTTTGTAGTTTGAGGATCCCCGTGATGCTGATGATGCAATTTGCGGCCGTGATGGGTATAACTTTGATGGCTACAGGTTGCGGGTATGGATATCAAAATGTTTTTCTTCCGGTCTTCTGGTCTGCTTTGGTTTTCTGTGCCTGTGGCTTTATATTTTCTGTACGTAGGTGGAATTAGCTCATGGTGGAAGAGGTCAATCTTACTCATACGATCGCCCAAGAAGCTATAGCAGTGGACGACGTGGAGGTGTTTCTAGGCGTTCTGAATATCGCGGTTTGTAATTCTTTCTCTTGAATGTGTTAGTCGGTGTATCCCAACAAAGAATGTGATGTTTCTATTTGTTGGACCATGCAGTTATGGTCACTGGCTTACCTTCATCGGCATCATGGCAGGATCTTAAGGTATTGGTGTTGTACATAACTTCTATTTATAGATTTTTCTCTAATGACCTAATTATTACCTACATTCAGGACCATATGCGGCGGGCTGGTGATGTCTGCTTCTCTGATGTATACCGTGAGGCTGGAGGTTAGTAATAAATGTTCTCTTCTTGTTATGTCATCGTACCATGGGCCCTGGGATGAGAATCAATTGCTTATGTGTTGATCTTAGTTTTAATTCATTGTCCTCCGAAATCAAGATTCATGCTTTAATATTTTTTCTGAGAATACAAAAGCTGTGTATTATTTCATTAAGACAGAGACTGGATGACGTCTGTCAGCTGGTCATCAGGCCCGTCAAACCCCCTCAGGTCAGGGAAAAATAATTATAAAAGAAGTCCTAAAATGCTAAAACTGAAAATGAAAGAAACGACAATGTCCTATACTCAGAAGCAACCTCTGAGCCTGCAGAGGCCTTTCTATATAGTTTGCGGGCTATGTCAGTAATATTTGTCTTTCTGTTTGTGTTGCAGCAACCGTTGGAATTGTGGATTATACAACCTATGAAGACATGAAGTATGCGGTATGTTTGATATCTTCTGTATAAAGTGCATTCTGAAAATATTATACTTTTTGGTAATTGATGAGGGAACATTTTCAGATGTGTTATTCCTGTTATACACTTTGGTCATATACGTTGACATTTATGGCAAGATTTGGTCAAATTTTTGAAATGTTGACTATCAATTTTATATTAGAATAAGTTTATAAAATCTAATAAATTTATGACATTATGATAGTACTTTTCAAGGTAAATCTAGCCTACCATCTTTTTTTTTCAACAAAGCATTTGAAAAATTATTAATGATTGAAGTTTCATAAGTTTGACATAAAAATCAAATATTTATGATTAGAGGGAGTATTTGGTATGTATCTCTTATGATCTTTTGATGATCTTGCAGATTAGGAAGCTTGATGACTCAGAGTTCAGAAATGCATTTTCACGGGCATATATCAGGGTATGGATTTATTTGTTTTTTGACCATGAGGGTTTTTCCTGTTTTTGCTATGATAATAGATAATATGTCTTCTAGATGCATTTGATTGTGATCTTTCGTCAACGTGTTCTTATTTCTATGATAGGTGAGGGAGTATGATGATAGATCAAGAAGCAGAAGCCGCTCTTACTCAAGAAGTCGTAGTTACAGCAGGAGCACTATGGCAGCACTAATTGTTGACTGCATTGTTCCACAGATCTGTTTCTCGGTCACCGTCACCTGTGGATGAAAGGTATATCCTTTTATAACATCAGCTTTTTACTGGCATGCCATTTTTGTCGTTAAAGAGAAACAGGAGTATGTGTTGGAATTTGGGTTTTTATATACTTTGGAACTTCCACTGTGGTTCATAAAACATATGATTGAAAAGCTTGTAATGTATTTCCTTTTTTTTGACCGACTAATGTATGTCTCCTTTTAAATTGATATGACTTAAATTTCCTCTATGGCCCAATGACTAAAACACAGTGCTGGTGGCTAACTTGCAATGTTCAAGGTTTGCTTTTGTTTTTCCTAGATCTGGCCATGCGGCAATCTGGGGACTGCTTTCATAGATTTTGGATATGTTGAGAATCGAAAGGATGGTTTGGAACTTTGGATAGTAGAGCTGGATTGTGATGCATGTATGGCAAATGGGCAACAACCAGTCCTAGGAGCGAGCTAGGCCTGACAGTAAGGATATGTGGAGTGGATTTGTGTTATTATTGAGAATTTGTTGACCGTAGGCACTTCAATTTCATATACTGCATGACATGGACCTAACTTACATGAGATCTCAAAGTTTTCTTTTAATTATTCTTGCATCCTGATAAAACAAGATTATGGTACTTGGTAAGCATTTTTCTGGAATATGTACGTGCTTTTTTCACAACAAAAGAAATTGATCCTGCTTAGTTTTTATGCGGATTCTGTTGAAATAGAGATTTTGTTTTGTTCATTGGCACATATTAGCCATTTAGCATGAATACAAAAATGCTTACTTATCAGTGTGGTTCTTCTGTAATTTGTTTTGATATTTCTGTTAGTAGTTTTTGGATGAAATCACACTGAGTGATTGGTTTTGCCTGTGAAATTTTGCAGATCAATATCAAGATCACGGACTCCTGTTTCTTCAGTAAGTCTTGCAGCAAGTCATCTATTATTAAAAAGTGAATTAAGTCCTATTTTCAATCATTTTGTTTATTGCAATTTGCCTTTTTTTGGCAGCCTTCTCGTGGAAGATCTGTTAGTAAAAGCCCAAGCAGGAGCTTATCCCGCTCTCCCTCTCCGGTAAATACCAAATAATTCCTCCCACATTTACAATGCCCCTCCCGCCCTGAACAAAGGAAAAAAAAAAATAGAGAGAACTCATTACACTGGTGAAACACTTTATGATCATTTGCTGCCTACGTTGTTGCAGGTGAAGTCTGATTGAACATGAAAACCCTCCAGACTGTGACGGCTACTTAAGGATCCAGGAACCTGGAACTCGAGGATAGCATGGATTAGATCAAATCATCCTGGTTATGGCTTCACTGCGCTACAGGCTTCGCCCTTTGTTTAGTAGGTCGACTTCTGTTTAATATTATTCATATTGCATTATATTTGCGAAACAGAGATCATGTGTTCTGTAGTCATAGTCCCAGTACTTATTTTACATCTAGTAAGTGGAAGAAACTATCTGCACATTGTTGTCGACTGTATTTTAAATATCTGATGCCATATATATGTTGATGTACCACCTTTGGTTGTCCTTTGAACCGTG More
CDS seq		ATGGCGGCTGAGGCTTCCAATGTTGAACAAGTCGAAGATACAGACAATGAAAATGATGTTGTGATAGTGGGCAGTCGTCAAAGAGAAAGATGGGACATGAAGGAATCTAAAACTGCTACTGGATTTGGTATAAGTCCGATGTTCCATAAGGATATAGATCTTGCAGGGTCGGTTGGTAGCTGGTCGAAAATCCATTATGAAGTTGCAAAATGCAAATCGGCGCGGACCCAGAATGCTTGTACAGCTGGTATTTATACCTATTTGGCAGAAACAATGAGCAGACGCAACAGCCGCACCATCTATGTAGGCAATCTCCCTGGGGACATTCGTGAGAGGGAGGTTGAGGATCTCTTTTACAAGTTTGAGGATCCCCGTGATGCTGATGATGCAATTTGCGGCCGTGATGGGTATAACTTTGATGGCTACAGGTTGCGGGTGGAATTAGCTCATGGTGGAAGAGGTCAATCTTACTCATACGATCGCCCAAGAAGCTATAGCAGTGGACGACGTGGAGGTGTTTCTAGGCGTTCTGAATATCGCGTTATGGTCACTGGCTTACCTTCATCGGCATCATGGCAGGATCTTAAGGACCATATGCGGCGGGCTGGTGATGTCTGCTTCTCTGATGTATACCGTGAGGCTGGAGCAACCGTTGGAATTGTGGATTATACAACCTATGAAGACATGAAGTATGCGGTGAGGGAGTATGATGATAGATCAAGAAGCAGAAGCCGCTCTTACTCAAGAAATCTGTTTCTCGGTCACCGTCACCTGTGGATGAAAGTGCTGGTGGCTAACTTGCAATGTTCAAGATCAATATCAAGATCACGGACTCCTGTTTCTTCACCTTCTCGTGGAAGATCTGTTAGTAAAAGCCCAAGCAGGAGCTTATCCCGCTCTCCCTCTCCGGTGAAGTCTGATTGA More
Protein seq		MAAEASNVEQVEDTDNENDVVIVGSRQRERWDMKESKTATGFGISPMFHKDIDLAGSVGSWSKIHYEVAKCKSARTQNACTAGIYTYLAETMSRRNSRTIYVGNLPGDIREREVEDLFYKFEDPRDADDAICGRDGYNFDGYRLRVELAHGGRGQSYSYDRPRSYSSGRRGGVSRRSEYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGATVGIVDYTTYEDMKYAVREYDDRSRSRSRSYSRNLFLGHRHLWMKVLVANLQCSRSISRSRTPVSSPSRGRSVSKSPSRSLSRSPSPVKSD
Function		Serine/arginine-rich-splicing factor SR34 [UniProtKB/Swiss-Prot:O22315]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsCMeo_01g0014580	OsCMeo_01g0014580.03	Chr01	12441360	12449173	+	NAM
CDS seq	ATGGCGGCTGAGGCTTCCAATGTTGAACAAGTCGAAGATACAGACAATGAAAATGATGTTGTGATAGTGGGCAGTCGTCAAAGAGAAAGATGGGACATGAAGGAATCTAAAACTGCTACTGGATTTGGTATAAGTCCGATGTTCCATAAGGATATAGATCTTGCAGGGTCGGTTGGTAGCTGGTCGAAAATCCATTATGAAGTTGCAAAATGCAAATCGGCGCGGACCCAGAATGCTTGTACAGCTGGTATTTATACCTATTTGGCAGAAACAATGAGCAGACGCAACAGCCGCACCATCTATGTAGGCAATCTCCCTGGGGACATTCGTGAGAGGGAGGTTGAGGATCTCTTTTACAAGTTTGAGGATCCCCGTGATGCTGATGATGCAATTTGCGGCCGTGATGGGTATAACTTTGATGGCTACAGGTTGCGGGTGGAATTAGCTCATGGTGGAAGAGGTCAATCTTACTCATACGATCGCCCAAGAAGCTATAGCAGTGGACGACGTGGAGGTGTTTCTAGGCGTTCTGAATATCGCGTTATGGTCACTGGCTTACCTTCATCGGCATCATGGCAGGATCTTAAGGACCATATGCGGCGGGCTGGTGATGTCTGCTTCTCTGATGTATACCGTGAGGCTGGAGCAACCGTTGGAATTGTGGATTATACAACCTATGAAGACATGAAGTATGCGGTGAGGGAGTATGATGATAGATCAAGAAGCAGAAGCCGCTCTTACTCAAGAAATCTGTTTCTCGGTCACCGTCACCTGTGGATGAAAGTGCTGGTGGCTAACTTGCAATGTTCAAGATCAATATCAAGATCACGGACTCCTGTTTCTTCACCTTCTCGTGGAAGATCTGTTAGTAAAAGCCCAAGCAGGAGCTTATCCCGCTCTCCCTCTCCGGTGAAGTCTGATTGA More
Protein seq	MAAEASNVEQVEDTDNENDVVIVGSRQRERWDMKESKTATGFGISPMFHKDIDLAGSVGSWSKIHYEVAKCKSARTQNACTAGIYTYLAETMSRRNSRTIYVGNLPGDIREREVEDLFYKFEDPRDADDAICGRDGYNFDGYRLRVELAHGGRGQSYSYDRPRSYSSGRRGGVSRRSEYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGATVGIVDYTTYEDMKYAVREYDDRSRSRSRSYSRNLFLGHRHLWMKVLVANLQCSRSISRSRTPVSSPSRGRSVSKSPSRSLSRSPSPVKSD More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsCMeo_01g0014580	OsCMeo_01g0014580.01	Chr01	12441360	12449180	+	NAM
CDS seq	ATGGCGGCTGAGGCTTCCAATGTTGAACAAGTCGAAGATACAGACAATGAAAATGATGTTGTGATAGTGGGCAGTCGTCAAAGAGAAAGATGGGACATGAAGGAATCTAAAACTGCTACTGGATTTGGTATAAGTCCGATGTTCCATAAGGATATAGATCTTGCAGGGTCGGTTGGTAGCTGGTCGAAAATCCATTATGAAGTTGCAAAATGCAAATCGGTCGGTTTCGTTTCCGCTCTCCGCTCCACGCGGCGTCGCCTCCGGAGCCCCCAGAAGCTTCTCGACCCACCACCACCGCTCTCCCTCTCCCCGTCAGAAACAATGAGCAGACGCAACAGCCGCACCATCTATGTAGGCAATCTCCCTGGGGACATTCGTGAGAGGGAGGTTGAGGATCTCTTTTACAAGTACGGTCGCATTTTGGACATTGACTTGAAGATTCCTCCAAGACCTCCTGGTTATGCTTTTGTTTAG More
Protein seq	MAAEASNVEQVEDTDNENDVVIVGSRQRERWDMKESKTATGFGISPMFHKDIDLAGSVGSWSKIHYEVAKCKSVGFVSALRSTRRRLRSPQKLLDPPPPLSLSPSETMSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFV

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsCMeo_01g0014580	OsCMeo_01g0014580.02	Chr01	12441360	12449173	+	NAM
CDS seq	ATGGCGGCTGAGGCTTCCAATGTTGAACAAGTCGAAGATACAGACAATGAAAATGATGTTGTGATAGTGGGCAGTCGTCAAAGAGAAAGATGGGACATGAAGGAATCTAAAACTGCTACTGGATTTGGTATAAGTCCGATGTTCCATAAGGATATAGATCTTGCAGGGTCGGTTGGTAGCTGGTCGAAAATCCATTATGAAGTTGCAAAATGCAAATCGGTCGGTTTCGTTTCCGCTCTCCGCTCCACGCGGCGTCGCCTCCGGAGCCCCCAGAAGCTTCTCGACCCACCACCACCGCTCTCCCTCTCCCCGTCAGAAACAATGAGCAGACGCAACAGCCGCACCATCTATGTAGGCAATCTCCCTGGGGACATTCGTGAGAGGGAGGTTGAGGATCTCTTTTACAAGTACGGTCGCATTTTGGACATTGACTTGAAGATTCCTCCAAGACCTCCTGGTTATGCTTTTGTTTAG More
Protein seq	MAAEASNVEQVEDTDNENDVVIVGSRQRERWDMKESKTATGFGISPMFHKDIDLAGSVGSWSKIHYEVAKCKSVGFVSALRSTRRRLRSPQKLLDPPPPLSLSPSETMSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFV

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsCMeo_01g0014580	OsCMeo_01g0014580.04	Chr01	12445753	12449173	+	NAM
CDS seq	ATGTCTTCTGTAAGGTTTGAGGATCCCCGTGATGCTGATGATGCAATTTGCGGCCGTGATGGGTATAACTTTGATGGCTACAGGTTGCGGGTGGAATTAGCTCATGGTGGAAGAGGTCAATCTTACTCATACGATCGCCCAAGAAGCTATAGCAGTGGACGACGTGGAGGTGTTTCTAGGCGTTCTGAATATCGCGTTATGGTCACTGGCTTACCTTCATCGGCATCATGGCAGGATCTTAAGGACCATATGCGGCGGGCTGGTGATGTCTGCTTCTCTGATGTATACCGTGAGGCTGGAGCAACCGTTGGAATTGTGGATTATACAACCTATGAAGACATGAAGTATGCGGTGAGGGAGTATGATGATAGATCAAGAAGCAGAAGCCGCTCTTACTCAAGAAATCTGTTTCTCGGTCACCGTCACCTGTGGATGAAAGTGCTGGTGGCTAACTTGCAATGTTCAAGATCAATATCAAGATCACGGACTCCTGTTTCTTCACCTTCTCGTGGAAGATCTGTTAGTAAAAGCCCAAGCAGGAGCTTATCCCGCTCTCCCTCTCCGGTGAAGTCTGATTGA More
Protein seq	MSSVRFEDPRDADDAICGRDGYNFDGYRLRVELAHGGRGQSYSYDRPRSYSSGRRGGVSRRSEYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGATVGIVDYTTYEDMKYAVREYDDRSRSRSRSYSRNLFLGHRHLWMKVLVANLQCSRSISRSRTPVSSPSRGRSVSKSPSRSLSRSPSPVKSD

Event Type	Chromosome	Start	End	Strand	Alternative mRNAs	Total mRNAs	Source
RI	Chr01	12446469	12446961	+	OsCMeo_01g0014580.02	OsCMeo_01g0014580.02,OsCMeo_01g0014580.01,OsCMeo_01g0014580.03,OsCMeo_01g0014580.04	All
SE	Chr01	12444892	12446007	+	OsCMeo_01g0014580.02,OsCMeo_01g0014580.01	OsCMeo_01g0014580.02,OsCMeo_01g0014580.01,OsCMeo_01g0014580.03	All
SE	Chr01	12446961	12447522	+	OsCMeo_01g0014580.02,OsCMeo_01g0014580.01	OsCMeo_01g0014580.02,OsCMeo_01g0014580.01,OsCMeo_01g0014580.03,OsCMeo_01g0014580.04	All
SE	Chr01	12447668	12448517	+	OsCMeo_01g0014580.03,OsCMeo_01g0014580.04	OsCMeo_01g0014580.02,OsCMeo_01g0014580.03,OsCMeo_01g0014580.04	All
MX	Chr01	12442045	12444801	+	OsCMeo_01g0014580.02,OsCMeo_01g0014580.01	OsCMeo_01g0014580.02,OsCMeo_01g0014580.01,OsCMeo_01g0014580.03	All

Expression

	Leaf	Root	Panicle
FPKM	0.916871	0.967645	12.185623

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_01g0316600	RBH	1.293697	1.714197	3.366528
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os01g21420	RBH	0.314657	1.260114	0.680727
Nipponbare \| IRGSP 1.0 \| RAP-db	Os01g0316600	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_01g0014560	RBH	1.136344	0.000000	13.096912
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_01g0014320	RBH	1.094379	2.496278	4.512453
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_05g0013970	RBH	1.070106	3.282971	3.903173
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_01g0014050	RBH	0.259327	0.038662	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_01g0014140	RBH	42.826111	15.689907	28.673792
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_01G0197600	RBH	3.0596335	2.427671	37.631216
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_01g0014030	RBH	0.161964	0.152471	4.134034
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_01G0194800	RBH	21.633878	11.7462355	3.7381715
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_01g0014080	RBH	1.506174	0.386952	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_01g0014100	RBH	2.682974	12.351934	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_01g0014100	RBH	26.789051	11.581521	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_01g0014190	RBH	1.119975	0.000000	1.731944
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_01g0013900	RBH	0.347567	0.199556	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_01G014230	RBH	0.118479	0.0	2.655129
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_01g0014000	RBH	0.636150	0.000000	10.335774

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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