Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsAzu_12g0014250 OGI:12051490 | 16/16 Azucena | AzucenaRS1 | Gramene(+IsoSeq) Chr12:19467637-19473969
Gene Symbol CYCA2;1, CycA2;1, CycA2;os;1, Orysa;CycA2;1, OsCYCA2;1, CYCA2.2
DNA seq

AAGATAATAGTACCTTGTTTTTCTAATAACGGAATAACATAATCTCGGTCAAACCAAGCAACCATTTGTTATACAAGCAGGATCATCTTACAATTATCAACCCAAAGGCGGCAGCCTACACACAGTGAGTGTTTTCTTACAATTATCAACTAAAGGCATACTTAAGGTCAAACAAATGCAAGCTATCTCTCCTTTTCTTTTTCTTTTTTTTTTTACTGCACGACTCTAAAATGGTCGGGAAACAACACTTCAGGACAACACAACAAATCAGAAAGCAGTCATGGTAATGACTGCTGCTAACGGTTGTTGATTAACAGGAAACTGATACCATTGCCTTTGTCAGCTGAAGAGTGACTGCCCCAGCTCCGGTGATGTCAGGTTGGCTACACACTCAAACTGCACATGAAGTACAATTAAATGGTCACAAAAGATGAACAAATGACCCTTTTTAGTCTAGTACCTCAAGAAGCTGGTGAAGTGGTGATCATGTACCTTTTGTTGCCTATACTTTTCACGTATAGCATTGAGAGGGCAATTACTGGTGTTATGCTGCAGTTCCCGTAGAGCACAGACACATATTTGAATATCAGAGCTTTTGTAAGAAGTGTAGTGCTCAAGAGTATGATTCTGTAAAAAGATACCAAGGTTGAAGATTAGAAAAAATGTTTTGGGGTGATACAGAGGTCGATATAGTGCATATCCTTGTTATACGAACCCATGGAATGTCAGATTGGTCAAGTGTCCATCTTGCAAGAAAGACTGCAGATGCTGCCACCACTGAAGGAAGAAATTTGAGGAAACTGTAATCGATCAGGGTCAGCTCTGCAAGATAATTGGCCAGATATCCCAAGGTAATTGAAGGAACCTGGAAATACAGTTTGAAAATTTGGCGTTCAGGGATATACACATAAAAGGAATGAATGAAAATTGTAGCTGATAAAAGGTCGGGTGCCAATCTTACATTACGAGAAACCTGTGCGGCTCTAAGGAATCTCCTGATAAAATATAAAGAAAAGAAGGACGGTCATGTTAGTGATAGAACCACAACTTAGATTGGACAAGAAACACCATATGTATGTGGTAACCAAAACTACCTGAGAAATGTTTTTGTTGTTGGAACAGATAGATGAAACCCCAGATCATTAAGCACCAGGCCCTCCATTTTCAGCACCTATTGAATCAGGGGGATATCATATCAGCAATGGCAGTTCAATGGCTCTTCTATATACATAAATTAGCAATTTCTTCAGACATCACATGAAACAAATACCTCAGCTTTTGTGTATGTATTGTCAGTTATGAAACAAAATTCTTCAACACGAGGAGCACATATCTCTTCATATTTCCTATAAAAAGAAGGTAGACTTAGCAATACTTCCAATGACATGAAGACAACATGCAATTCCAATGACATGAAGACAACTTGCAGAGTTGTTAGCTTGTACTTTACATTAGCTACAGACTAAGCTGCATCAGCAGCTAGGTAAACCTTTCTATGGTACATTTTGGGAAAATCACATATATGTATCCAAAACTTACGAGGCAATCAGCATGCTTGTTATTCCAAGAAGTTGGAGTTTCTGTCTTTCAATATAATGTTGAGAAAGAAATCGGTCAATAAGATTAATGGTTAGGTAGAGTGTGTCTGGCACAAGCTTATATTCTTCAGAAACCTGAAATGAAGACAATATACAGAACTTCATAAGCTCAGAAGTCATGAACAGTTCATATTATTAAATTAAAATGTACAAAGGATGATCATGGTTTATTATAACAAAAAAGAAAAGGCAGATTCTTCGAATTTTGCAAGAAATGTATAAAGCTTGCTTCTGATGCAGAAGCCAACTACTCATATTCTCACCTCTTCAGTATCTCAGGCTCTCCGCTAAATGATGAGAAGAGTGATTTTATAATCCACAACTTATTCAATTATCTCATATAAACTTTTCATCATTGAAACTATGGTACTTTCAAAGGGAAATGCAAAGGACAAATGGAAAAAGTATAAACAATAATGATTCAATAGAAAGAATGTTCTTGTAGGCTTTTAACCAGATGCAGCATCCAGTATGTAACATTCACATGTAACTATGTATTTCATGTTTGAGTTGCACATACATGAGTTTCTATGTGACATGCAGCGAGATGCTAACAGCCTAACAATAAACGGCTTAAATTCGTTTGAAAAGATAGCAGGGCAGTTTATGTGCAAATTACATCAAGAGAAATCAACCTCAACAAGCCAATCAATGAGAATGCCTCGCATGCCCTTTGTGATGTCACGTTGCAAAGCCTCCATGTAATTTGACCTGGGTCTTCTGATAAGCTGGGAATGGCATAAGCAGAAGATGGAGTTTGAATTCAAACAAGAAGAAAGCACCAATAACACAGGGATGAAACAACCATGAAAAACTGAAATTACTTTTGTCATACTAGAATGTTTGAAATATGAAGAAACCATGAGCATGTTAAGACAGTAAACAAGATTTTGTTTTTCATCAAAGAACAAAAACATACCTCAGAGGCCATCAGATTTGTGTATATCTCTGAAGCATAGGAAGCACACATTTGAGGATTTCCATTATCATTGTCAATATCTATAAAACCTAAACCACTAGAGTCACCTGGAACAAAATAAATGACACTTTAGCAATCAGCAGTGTACAGAAAAATTTATATTCATGTTTTTCTTGATTATGACTAGCAAAATACCCGTGCGTTGCAAGGGGATTACAGTAAAGCCCAAAAAGCAAAATAAAATTATTACCACTCTCTAATCATCATATCATATTTGGTACAATTGTATACATGTAAGTCGAGCTACACAGTTGCTCTAGCGATAAACAATTGGTATAAATTATCCACATTGTATTTGATTTATATAGTGGACACTGACATCATAGGCCCACATGACACTGGCAGAACCACCACCACCACTACCAACATCTGCAGTAGTAAGTACAGATTATCTATGAATATCTCAGAAGTCAGCAGTGTACAGAAACATTTATAGTCATGGTTTTGTACAGAAACATTATAGTCATGGTTATCTTGATTCTAAGTTCTGTGACAACAGAAAGACAATCAAGAGTATGTTCCTGATAGAAGTGATTGACAACCGGTAGATAACATGACACGCTAAGGGATATATGAATCTTTTTTATAGAATTAGCTGACTTGAAAAGAAAAATCAGTAAGTCCAGATACTCATTGCTAAAAATAAGCATGCAACGTATGCAAAATAACTAACCAGGCTTGGAGTCAGCGAGTTCATGTTTATCCATGGCGTTTCTTGCCTCAAAGAATGCCTCATGGCAATTACTGTCCCTGTTTCGCTCAATATTCTGCAATGACAGTAACCCCTCGTTTTCAAACAAATTTGTGGGTTCCTCTGCTTTTGCCAAAAGCTCCACCTTTTGAGTTTCTTCAGAACTTTTAGAATCAATCACAAATGAAGTTCCAGCAACAGCCGGAGGGGGTAGCTTAGGAACCTTCTTTGCACACTGCTTTTTGCTCGGGATTTGTTTCACCCTTTGGGTGGGCTTTGACTTTTGCTGGAACAAAGGAATAACCTTATCACTCCATCAACAATGTTCATGGAAAATAAAGGTCTAAAAATCATAATAGCATAATGCGATAATGCAGCAGCTCTTGATACCTGCAGCTTGCTCGTGGTGGTGCAATTTTTGGACGAGTTGGCACAGCCGATGTTGGTTACATCCTTGAGCACTGTGCGCCGTTTAGGCTGAGGAGCTGAAGTTGCAGTACTTGCACTAGTGATTTCATCCAAAACTCCCCTTTTTGTCTTTCCTTTTGCTGTCTGCTTTCGTTCAGTTCTTGCGGGTAGTGATACGGAGGGAGCAAACCCAAACCGTCCACGATTTGCAGCAGCTTGAGCTCGTGTGATTCGACCACTGGGTGCTTGGCAAGCAGTAAGCACCGGATTTTCCTTCCTTCCAGCCATGTGAGCCTGAATGTGTTAAAAGGAAAAAAAATGACATAAGAAATTGTGCAGTTTTGACGCAAAAAAAAAGAAAGAAAGAAATTGCACAGTGAGCAATGAAGATATCAACCAAGGCAAATAACTTTATGGAGCTGAATGAGACGGTGCATTAAGCATTAAGTATCAGTGTTAAAAAGAAATCGAACAAGTAGATGCAATGCAGACATAAAACAGTATCAGATCTTATTTGCAAATCTAACAAGATCATATTTACTCACAAGTGCACAAGTTAAACCAAAATTATTCAGTCCCTTCGTAGCATAATTGAGAGAAATAATAGATAATCCCAGGGCATACAGATCGGAATTAGCAGTCAGTTGGCACAAATGTTTACAGTTATGATCTATAATTCAAATCTGAAACCAGATTTATTTGTCCATTTCGTTATGTGCAAAAAAGGCAGCGCTTTCTATAGATTTTATGGCGTTCTTTAAACAAAAGTCCCTTCTAAAACTGCCTTGCAAAATGCCATCTTCATATTCAGGTTAGATTTCCTAACACTTTTGTTTTCTTTCATGGCGTTGAACAGATGCAAAATTAACCTTATGCACCAGATTGAGCCAAGAAACCCTCCAAGTCAAGCTACCATCAGATACTCAACTAAAAAGTCACTTTTTTTTTCAAAAAGGATGCCACCCAACCTTAGCCCTAAAGCTGAAATCCTCGCAAACGTTACCAACATGGACCAATCTACGCACATCCCCCATCCTCAGACGCGCACAGATCAAGCAGATCTACCACACGGACGACGGGGCAAGAAGCCAAGAACCCCCCACGAGCGCCGCGAAAATCACCAATGCGTACCAAGAACCCCCAAATGCAAGACCAAATCAAGAACCCCCCACCCCACCCGGCCCCAAATGCCAACCCACCCAAAATTCCCGGAAACAATCGGAGTCACCCACCCCCTCTGCGCGGCGCGGGCACCCGGGACACGGAGAGGCGCTCCCCCGTCCCCCGCGGCCGCCTGCGGCGGCGAGTAGTGCCCTAGAAAAGTAAAAAAAGGGAGTCGCGGCTGCGGCGGCGGAGGCGGAGGCGGAGGAAAGGGGGCCCCTTCGGATCCGAGCCGAAGAGGGGGTGGCGGAGCACGTCTCCACGCCGCCGGCGGCAGGCGGCGGCGGCGGCGGCGGCGACCGGAGCGGAGGTGGGGGTGGAGGCGGGGGGTGGCGAATGGTGGTGGTCTCCTCCCCTTTTTGAAGTTTGAAGGCGTAGGCGGGATGGGGGAGGAGGATTGAGGAAGAAGCCGAGAGCGAGATGGGGAGGGGGCTTGGTGGGCCCGGCCCGTTAGGGACCCGGAAAAGGGAAAGTGGGGTTTTGGGCCTATATATACGGATAAGGCAACTTTTGTGGCCCTAGAAAGGAAGGTGGCTTTTTTAGTTGAGTACGTACGGCCCATGTAACATGTTTGAGCCCGGTCCATTTTACTCTCTTTTTTTTCAATAGATGACGTTGTTGACTACACATATTTAATCATTCGTCTTATTCACAATGTTTATGCAAATACATGAGATATAAATAATTCTTTAAATATTTTTAGTGATAAAACAACTCACAACAAAATAAATGATAATTGCATAAATTTTTTGAATAAGACGAATGGTCAAACGTATACCCAAAAATCAAAAGAGGTAGTAGGTAGTAGTGGACTTGGCTAGCGAAAAAACTTAGAGGATAGCATTATTCGCAACCTTGCAAAAGTTTTAGGGCTTCTTTAGGAACGCGGGAATTTTTTTTATTAAACTTTTTGTAGGATTTAGTTCAATTACTCCATTCCAAGGGAGTCATTCGCTGAAAACACAATCTATGTGCGAAGAGATAAAAAAAAGGGGGTAGGGCTTTTTCGGAACGTAGAAACAATCTGTTTAACTGCGAAACTTCCCCATTCCAAAGAGACCTAAAGTGCATTTATAGTGCGTAGACCATGTGTTAATGTAGTGACTCCTATTATAGATACAAAGGCGAGCCCATGAGATATTTCCAAGTTGGGGCAAACATGTTGAGATCTGTAGCAGATATTCCAGTGGGACCCGATGAACATAAAGATGAAAAGTCGTGTCACCAACATCCTTGTAGGCGTGTACCTCCCTCGACTCCTCGAGCCATAAATATCATGTTCACCGCTGGCTTGCCTTATTGGCCAGAATGGAGTAGAATCGCTCTTGATCTACTCCTTCCGAACATTCATGTGTCCGTAGCCATACCAAAATCTATCTCTAATTTTAAACATCCAAAGTCTAGTACATTATATCACCTAAACAAAAATCTAGAGATCCGAAGCATATCATGAACAAGGGGGGAAAGGCAAGGAGGGGTTACCTGGTGAAGGTCAT

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CDS seq

ATGACCTTCACCAGGCCCAAAACCCCACTTTCCCTTTTCCGGGTCCCTAACGGGCCGGGCCCACCAAGCCCCCTCCCCATCTCGCTCTCGGCTTCTTCCTCAATCCTCCTCCCCCATCCCGCCTACGCCTTCAAACTTCAAAAAGGGGAGGAGACCACCACCATTCGCCACCCCCCGCCTCCACCCCCACCTCCGCTCCGGTCGCCGCCGCCGCCGCCGCCGCCTGCCGCCGGCGGCGTGGAGACGTGCTCCGCCACCCCCTCTTCGGCTCGGATCCGAAGGGGCCCCCTTTCCTCCGCCTCCGCCTCCGCCGCCGCAGCCGCGACTCCCTTTTTTTACTTTTCTAGGGCACTACTCGCCGCCGCAGGCGGCCGCGGGGGACGGGGGAGCGCCTCTCCGTGTCCCGGGTGCCCGCGCCGCGCAGAGGGGGCTCACATGGCTGGAAGGAAGGAAAATCCGGTGCTTACTGCTTGCCAAGCACCCAGTGGTCGAATCACACGAGCTCAAGCTGCTGCAAATCGTGGACGGTTTGGGTTTGCTCCCTCCGTATCACTACCCGCAAGAACTGAACGAAAGCAGACAGCAAAAGGAAAGACAAAAAGGGGAGTTTTGGATGAAATCACTAGTGCAAGTACTGCAACTTCAGCTCCTCAGCCTAAACGGCGCACAGTGCTCAAGGATGTAACCAACATCGGCTGTGCCAACTCGTCCAAAAATTGCACCACCACGAGCAAGCTGCAGCAAAAGTCAAAGCCCACCCAAAGGGTGAAACAAATCCCGAGCAAAAAGCAGTGTGCAAAGAAGGTTCCTAAGCTACCCCCTCCGGCTGTTGCTGGAACTTCATTTGTGATTGATTCTAAAAGTTCTGAAGAAACTCAAAAGGTGGAGCTTTTGGCAAAAGCAGAGGAACCCACAAATTTGTTTGAAAACGAGGGGTTACTGTCATTGCAGAATATTGAGCGAAACAGGGACAGTAATTGCCATGAGGCATTCTTTGAGGCAAGAAACGCCATGGATAAACATGAACTCGCTGACTCCAAGCCTGGTTTTATAGATATTGACAATGATAATGGAAATCCTCAAATGTGTGCTTCCTATGCTTCAGAGATATACACAAATCTGATGGCCTCTGAGCTTATCAGAAGACCCAGGTCAAATTACATGGAGGCTTTGCAACGTGACATCACAAAGGGCATGCGAGGCATTCTCATTGATTGGCTTGTTGAGGTTTCTGAAGAATATAAGCTTGTGCCAGACACACTCTACCTAACCATTAATCTTATTGACCGATTTCTTTCTCAACATTATATTGAAAGACAGAAACTCCAACTTCTTGGAATAACAAGCATGCTGATTGCCTCGAAATATGAAGAGATATGTGCTCCTCGTGTTGAAGAATTTTGTTTCATAACTGACAATACATACACAAAAGCTGAGGTGCTGAAAATGGAGGGCCTGGTGCTTAATGATCTGGGGTTTCATCTATCTGTTCCAACAACAAAAACATTTCTCAGGAGATTCCTTAGAGCCGCACAGGTTTCTCGTAATGTTCCTTCAATTACCTTGGGATATCTGGCCAATTATCTTGCAGAGCTGACCCTGATCGATTACAGTTTCCTCAAATTTCTTCCTTCAGTGGTGGCAGCATCTGCAGTCTTTCTTGCAAGATGGACACTTGACCAATCTGACATTCCATGGAATCATACTCTTGAGCACTACACTTCTTACAAAAGCTCTGATATTCAAATATGTGTCTGTGCTCTACGGGAACTGCAGCATAACACCAGTAATTGCCCTCTCAATGCTATACGTGAAAAGTATAGGCAACAAAAGTTTGAGTGTGTAGCCAACCTGACATCACCGGAGCTGGGGCAGTCACTCTTCAGCTGA

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Protein seq

MTFTRPKTPLSLFRVPNGPGPPSPLPISLSASSSILLPHPAYAFKLQKGEETTTIRHPPPPPPPPLRSPPPPPPPAAGGVETCSATPSSARIRRGPLSSASASAAAAATPFFYFSRALLAAAGGRGGRGSASPCPGCPRRAEGAHMAGRKENPVLTACQAPSGRITRAQAAANRGRFGFAPSVSLPARTERKQTAKGKTKRGVLDEITSASTATSAPQPKRRTVLKDVTNIGCANSSKNCTTTSKLQQKSKPTQRVKQIPSKKQCAKKVPKLPPPAVAGTSFVIDSKSSEETQKVELLAKAEEPTNLFENEGLLSLQNIERNRDSNCHEAFFEARNAMDKHELADSKPGFIDIDNDNGNPQMCASYASEIYTNLMASELIRRPRSNYMEALQRDITKGMRGILIDWLVEVSEEYKLVPDTLYLTINLIDRFLSQHYIERQKLQLLGITSMLIASKYEEICAPRVEEFCFITDNTYTKAEVLKMEGLVLNDLGFHLSVPTTKTFLRRFLRAAQVSRNVPSITLGYLANYLAELTLIDYSFLKFLPSVVAASAVFLARWTLDQSDIPWNHTLEHYTSYKSSDIQICVCALRELQHNTSNCPLNAIREKYRQQKFECVANLTSPELGQSLFS

Function Cyclin-A2-1 [UniProtKB/Swiss-Prot:Q2QQ96]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsAzu_12g0014250 OsAzu_12g0014250.01 Chr12 19467637 19473969 - NAM
CDS seq

ATGACCTTCACCAGGCCCAAAACCCCACTTTCCCTTTTCCGGGTCCCTAACGGGCCGGGCCCACCAAGCCCCCTCCCCATCTCGCTCTCGGCTTCTTCCTCAATCCTCCTCCCCCATCCCGCCTACGCCTTCAAACTTCAAAAAGGGGAGGAGACCACCACCATTCGCCACCCCCCGCCTCCACCCCCACCTCCGCTCCGGTCGCCGCCGCCGCCGCCGCCGCCTGCCGCCGGCGGCGTGGAGACGTGCTCCGCCACCCCCTCTTCGGCTCGGATCCGAAGGGGCCCCCTTTCCTCCGCCTCCGCCTCCGCCGCCGCAGCCGCGACTCCCTTTTTTTACTTTTCTAGGGCACTACTCGCCGCCGCAGGCGGCCGCGGGGGACGGGGGAGCGCCTCTCCGTGTCCCGGGTGCCCGCGCCGCGCAGAGGGGGCTCACATGGCTGGAAGGAAGGAAAATCCGGTGCTTACTGCTTGCCAAGCACCCAGTGGTCGAATCACACGAGCTCAAGCTGCTGCAAATCGTGGACGGTTTGGGTTTGCTCCCTCCGTATCACTACCCGCAAGAACTGAACGAAAGCAGACAGCAAAAGGAAAGACAAAAAGGGGAGTTTTGGATGAAATCACTAGTGCAAGTACTGCAACTTCAGCTCCTCAGCCTAAACGGCGCACAGTGCTCAAGGATGTAACCAACATCGGCTGTGCCAACTCGTCCAAAAATTGCACCACCACGAGCAAGCTGCAGCAAAAGTCAAAGCCCACCCAAAGGGTGAAACAAATCCCGAGCAAAAAGCAGTGTGCAAAGAAGGTTCCTAAGCTACCCCCTCCGGCTGTTGCTGGAACTTCATTTGTGATTGATTCTAAAAGTTCTGAAGAAACTCAAAAGGTGGAGCTTTTGGCAAAAGCAGAGGAACCCACAAATTTGTTTGAAAACGAGGGGTTACTGTCATTGCAGAATATTGAGCGAAACAGGGACAGTAATTGCCATGAGGCATTCTTTGAGGCAAGAAACGCCATGGATAAACATGAACTCGCTGACTCCAAGCCTGGTTTTATAGATATTGACAATGATAATGGAAATCCTCAAATGTGTGCTTCCTATGCTTCAGAGATATACACAAATCTGATGGCCTCTGAGCTTATCAGAAGACCCAGGTCAAATTACATGGAGGCTTTGCAACGTGACATCACAAAGGGCATGCGAGGCATTCTCATTGATTGGCTTGTTGAGGTTTCTGAAGAATATAAGCTTGTGCCAGACACACTCTACCTAACCATTAATCTTATTGACCGATTTCTTTCTCAACATTATATTGAAAGACAGAAACTCCAACTTCTTGGAATAACAAGCATGCTGATTGCCTCGAAATATGAAGAGATATGTGCTCCTCGTGTTGAAGAATTTTGTTTCATAACTGACAATACATACACAAAAGCTGAGGTGCTGAAAATGGAGGGCCTGGTGCTTAATGATCTGGGGTTTCATCTATCTGTTCCAACAACAAAAACATTTCTCAGGAGATTCCTTAGAGCCGCACAGGTTTCTCGTAATGTTCCTTCAATTACCTTGGGATATCTGGCCAATTATCTTGCAGAGCTGACCCTGATCGATTACAGTTTCCTCAAATTTCTTCCTTCAGTGGTGGCAGCATCTGCAGTCTTTCTTGCAAGATGGACACTTGACCAATCTGACATTCCATGGAATCATACTCTTGAGCACTACACTTCTTACAAAAGCTCTGATATTCAAATATGTGTCTGTGCTCTACGGGAACTGCAGCATAACACCAGTAATTGCCCTCTCAATGCTATACGTGAAAAGTATAGGCAACAAAAGTTTGAGTGTGTAGCCAACCTGACATCACCGGAGCTGGGGCAGTCACTCTTCAGCTGA

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Protein seq

MTFTRPKTPLSLFRVPNGPGPPSPLPISLSASSSILLPHPAYAFKLQKGEETTTIRHPPPPPPPPLRSPPPPPPPAAGGVETCSATPSSARIRRGPLSSASASAAAAATPFFYFSRALLAAAGGRGGRGSASPCPGCPRRAEGAHMAGRKENPVLTACQAPSGRITRAQAAANRGRFGFAPSVSLPARTERKQTAKGKTKRGVLDEITSASTATSAPQPKRRTVLKDVTNIGCANSSKNCTTTSKLQQKSKPTQRVKQIPSKKQCAKKVPKLPPPAVAGTSFVIDSKSSEETQKVELLAKAEEPTNLFENEGLLSLQNIERNRDSNCHEAFFEARNAMDKHELADSKPGFIDIDNDNGNPQMCASYASEIYTNLMASELIRRPRSNYMEALQRDITKGMRGILIDWLVEVSEEYKLVPDTLYLTINLIDRFLSQHYIERQKLQLLGITSMLIASKYEEICAPRVEEFCFITDNTYTKAEVLKMEGLVLNDLGFHLSVPTTKTFLRRFLRAAQVSRNVPSITLGYLANYLAELTLIDYSFLKFLPSVVAASAVFLARWTLDQSDIPWNHTLEHYTSYKSSDIQICVCALRELQHNTSNCPLNAIREKYRQQKFECVANLTSPELGQSLFS

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 3.504522 0.549266

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_12g0502300 RBH 0.313017 0.000000 0.476866
Nipponbare | IRGSP 1.0 | MSU LOC_Os12g31810 RBH 0.191480 0.000000 0.167529
Nipponbare | IRGSP 1.0 | RAP-db Os12g0502300 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) NA NA NA NA NA
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_12g0014420 RBH 0.0 0.947351 0.143132
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_12g0014310 RBH 0.0 0.000000 1.110360
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_12g0014120 RBH 0.000000 0.365666 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_12g0013740 RBH 0.000000 1.550555 1.264752
Minghui 63 | MH63RS3 | HZAU OsMH63_12G0258600 RBH 3.5041985 3.163942 13.4025405
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_12g0013920 RBH 0.0 0.525071 0.107459
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_12G0283100 RBH 3.2990195 1.58728 14.3576165
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_12g0014030 RBH 0.0 0.212838 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_12g0014230 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_12g0014200 RBH 0.0 3.849265 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_12g0014090 RBH 0.0 0.0 0.000000
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_12g0014290 RBH 0.0 5.946621 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_12G014120 RBH 0.0 1.465624 0.394797
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_12g0013930 RBH 0.0 5.311028 0.704591
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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