Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_12g0003800 | OGI:12007660 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr12:2769020-2769467 | ||||||||
| Gene Symbol | OsFRDL4, FRDL4, MATE, - | ||||||||||
| DNA seq | GTTCATGAGAAAAATGTTTACTAATCTCTGAAGATTAATCTGTTCTTGCTTATGATGACCATCGTACCGGAACGCCTTTGTGAATGGTGCTGATGACGGCGGTGTCGCTGGTGAAAACGCCGCTACCGAACCACATGCCGGCGGCGAGGAAGGCCGTCAGCCCAACGCCGAGGACGACGGTGAGCTGCAGCACGCGGGCGGTGGTCACCGCCACCTTGTAGTGATCCTTCTTTGCAAACACGCTGGCAAGCAAGGCCTGAGGTTGATTGATCAATTTAAGCAAAGTTAATTAAGCAGCCATGCATATATCATCGGAATGTAGGCTAAGCTAGCTAGGTAGGTAGGTAGCTAGCTCACCTGGCCGGCGATGGCGAGGCCGTCGGCGAGGAGCGACATGGCGAGCCAGACCTGGGCGCAGATTTGGAACGCCGCCATGGCCGTCGCGCCG
More
|
||||||||||
| CDS seq | ATGGCGGCGTTCCAAATCTGCGCCCAGGTCTGGCTCGCCATGTCGCTCCTCGCCGACGGCCTCGCCATCGCCGGCCAGGCCTTGCTTGCCAGCGTGTTTGCAAAGAAGGATCACTACAAGGTGGCGGTGACCACCGCCCGCGTGCTGCAGCTCACCGTCGTCCTCGGCGTTGGGCTGACGGCCTTCCTCGCCGCCGGCATGTGGTTCGGTAGCGGCGTTTTCACCAGCGACACCGCCGTCATCAGCACCATTCACAAAGGCGTTCCGGTACGATGGTCATCATAA |
||||||||||
| Protein seq | MAAFQICAQVWLAMSLLADGLAIAGQALLASVFAKKDHYKVAVTTARVLQLTVVLGVGLTAFLAAGMWFGSGVFTSDTAVISTIHKGVPVRWSS |
||||||||||
| Function | Protein DETOXIFICATION 43 [UniProtKB/Swiss-Prot:Q9SFB0] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_12g0003800 | OsAzu_12g0003800.01 | Chr12 | 2769020 | 2769467 | - | NAM | ||
| CDS seq | ATGGCGGCGTTCCAAATCTGCGCCCAGGTCTGGCTCGCCATGTCGCTCCTCGCCGACGGCCTCGCCATCGCCGGCCAGGCCTTGCTTGCCAGCGTGTTTGCAAAGAAGGATCACTACAAGGTGGCGGTGACCACCGCCCGCGTGCTGCAGCTCACCGTCGTCCTCGGCGTTGGGCTGACGGCCTTCCTCGCCGCCGGCATGTGGTTCGGTAGCGGCGTTTTCACCAGCGACACCGCCGTCATCAGCACCATTCACAAAGGCGTTCCGGTACGATGGTCATCATAA
More
|
|||||||
| Protein seq | MAAFQICAQVWLAMSLLADGLAIAGQALLASVFAKKDHYKVAVTTARVLQLTVVLGVGLTAFLAAGMWFGSGVFTSDTAVISTIHKGVPVRWSS |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0106600 | SBH | 4.603232 | 3.389553 | 0.939900 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g06050 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0106600 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0000530 | SBH | 0.941818 | 1.247802 | 1.674738 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0004040 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0004050 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0003870 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0004060 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0049400 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0004050 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0053800 | RBH | 0 | 0 | 0.10854 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0003830 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0004050 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0004060 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0004010 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0003970 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G003890 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0004100 | RBH | 0.0 | 0.0 | 0.0 |
