Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_12g0000850 | OGI:12001860 | 11/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr12:627189-627410 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTAGGCCACTGCCACAGATCTTCCCACCGTCAACGTCACGCCTACACCTGGTCTCCTTCCCCGCCGCCAGACTCCTTCCTCGCCTCCACATGCTGCCGCTGACGACGACACACCGTCAGCCCCTTCGGTCGTGATGGCCTGCCAACCATCACCGCCACAGGCGCCACCGTCGCCAGCCGCCACCGCCGCCGCCACAGCCGCCATCCGCGCCGCGCGGGTCAT |
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| CDS seq | ATGACCCGCGCGGCGCGGATGGCGGCTGTGGCGGCGGCGGTGGCGGCTGGCGACGGTGGCGCCTGTGGCGGTGATGGTTGGCAGGCCATCACGACCGAAGGGGCTGACGGTGTGTCGTCGTCAGCGGCAGCATGTGGAGGCGAGGAAGGAGTCTGGCGGCGGGGAAGGAGACCAGGTGTAGGCGTGACGTTGACGGTGGGAAGATCTGTGGCAGTGGCCTAG |
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| Protein seq | MTRAARMAAVAAAVAAGDGGACGGDGWQAITTEGADGVSSSAAACGGEEGVWRRGRRPGVGVTLTVGRSVAVA |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_12g0000850 | OsAzu_12g0000850.01 | Chr12 | 627189 | 627410 | - | NAM | ||
| CDS seq | ATGACCCGCGCGGCGCGGATGGCGGCTGTGGCGGCGGCGGTGGCGGCTGGCGACGGTGGCGCCTGTGGCGGTGATGGTTGGCAGGCCATCACGACCGAAGGGGCTGACGGTGTGTCGTCGTCAGCGGCAGCATGTGGAGGCGAGGAAGGAGTCTGGCGGCGGGGAAGGAGACCAGGTGTAGGCGTGACGTTGACGGTGGGAAGATCTGTGGCAGTGGCCTAG
More
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| Protein seq | MTRAARMAAVAAAVAAGDGGACGGDGWQAITTEGADGVSSSAAACGGEEGVWRRGRRPGVGVTLTVGRSVAVA |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0004520 | RBH | 0.0 | 0.000000 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0001050 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0000870 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0000960 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0011100 | RBH | 0.0086145 | 0.0743645 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0000930 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0000860 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0001000 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0000970 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0000980 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0000980 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G000900 | SBH | 0.0 | 0.000000 | 0.144803 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0001060 | SBH | 1.527085 | 0.766512 | 0.503421 |
