Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsAzu_11g0006870 OGI:11015600 | 12/16 Azucena | AzucenaRS1 | Gramene(+IsoSeq) Chr11:5661676-5662118
Gene Symbol -
DNA seq

AGGCGCGCTGCTGCTGCGGAGCGTAAAAAAGCGGTCCACCAAGCTGATGAACCTGTCGCCCGGTTCATCGTAATCCCACCACTCCACAGAGAGGCCCGGTGCTTCCTTCCAGAGGTGGAGCCAGCGCCGGGCGAGCACGCACGTCGCCACCGCGTCGTGCACCGGGAGCAGCGACAGCACGAGGTGGAGCACCTCGTCCGGCAGGGCGCTGATGCGGTCCGGCGCCACTCGCTCCTTCTTCTTCCTCCCCCTCGCCGCCGCCACCGCCTTCCTCTTCCGGGGAGCCAGGGGAGGCATTCCGTCGAACGGTTGCCGCGCGTGTGGGTGGAAGTGGAAGCGCGGCGTCGCCTCGGCTCCGCCGAATGGCACCGAAATGCAGCCGCGCGCGCGCGTCGAACGCCGGAACGGCAGCGAGATGGAGTCTGGGAGATGAGTTTGGCCTT

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CDS seq

ATGAACCTGTCGCCCGAGAGGCCCGGTGCTTCCTTCCAGAGGTGGAGCCAGCGCCGGGCGAGCACGCACGTCGCCACCGCGTCGTGCACCGGGAGCAGCGACAGCACGAGGTGGAGCACCTCGTCCGGCAGGGCGCTGATGCGGTCCGGCGCCACTCGCTCCTTCTTCTTCCTCCCCCTCGCCGCCGCCACCGCCTTCCTCTTCCGGGGAGCCAGGGGAGGCATTCCGTCGAACGGTTGCCGCGCGTGTGGGTGGAAGTGGAAGCGCGGCGTCGCCTCGGCTCCGCCGAATGGCACCGAAATGCAGCCGCGCGCGCGCGTCGAACGCCGGAACGGCAGCGAGATGGAGTCTGGGAGATGA

Protein seq

MNLSPERPGASFQRWSQRRASTHVATASCTGSSDSTRWSTSSGRALMRSGATRSFFFLPLAAATAFLFRGARGGIPSNGCRACGWKWKRGVASAPPNGTEMQPRARVERRNGSEMESGR

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsAzu_11g0006870 OsAzu_11g0006870.01 Chr11 5661676 5662118 + NAM
CDS seq

ATGAACCTGTCGCCCGAGAGGCCCGGTGCTTCCTTCCAGAGGTGGAGCCAGCGCCGGGCGAGCACGCACGTCGCCACCGCGTCGTGCACCGGGAGCAGCGACAGCACGAGGTGGAGCACCTCGTCCGGCAGGGCGCTGATGCGGTCCGGCGCCACTCGCTCCTTCTTCTTCCTCCCCCTCGCCGCCGCCACCGCCTTCCTCTTCCGGGGAGCCAGGGGAGGCATTCCGTCGAACGGTTGCCGCGCGTGTGGGTGGAAGTGGAAGCGCGGCGTCGCCTCGGCTCCGCCGAATGGCACCGAAATGCAGCCGCGCGCGCGCGTCGAACGCCGGAACGGCAGCGAGATGGAGTCTGGGAGATGA

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Protein seq

MNLSPERPGASFQRWSQRRASTHVATASCTGSSDSTRWSTSSGRALMRSGATRSFFFLPLAAATAFLFRGARGGIPSNGCRACGWKWKRGVASAPPNGTEMQPRARVERRNGSEMESGR

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.000000

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_11g0202350 RBH 0.000000 0.000000 0.000000
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g09684 RBH 0.000000 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os11g0202350 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0006530 RBH 0.0 0.0 0.000000
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0006810 RBH 0.0 0.0 0.000000
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) NA NA NA NA NA
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_11g0006720 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_11g0006690 RBH 0.000000 0.0 0.0
Minghui 63 | MH63RS3 | HZAU NA NA NA NA NA
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Zhenshan 97 | ZS97RS3 | HZAU NA NA NA NA NA
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_11g0006670 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) NA NA NA NA NA
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_11g0006760 RBH 0.0 0.000000 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_11g0006430 SBH 0.000000 0.0 0.000000
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_11g0006820 RBH 0.0 0.000000 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G006790 RBH 0.000000 0.000000 0.000000
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_11g0006620 RBH 0.000000 0.000000 0.000000
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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