Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_10g0014060 | OGI:10040130 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr10:19074980-19076206 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTACAAATACTGATCAGTATTTCCTCTTGAAAGAAATTTATCAACAGAGGAGACTTTCTGCATAACTTTACATTGCATGCCATCAACAAAACTGAAAATGGCATACCTCCAGGTTCCGATGGAAAGGAGCATTCCGAACCATAGCCAAAAACCGAAAACCACTCCAGCCATTACACAGTAGTAGAAATATTGGTCCTCGCATGTTCTACAGTCTCTCTCATCTGACGCAACTGAAGCATTTGTGCATGAAATGTTTAACGGAGGGCCACAGAGCCCCGAATTATGGCTGTATATTGATGGGTCAGTGAAGGTTTGAAGTTGATTCCCGGTGGGTATCTTGCCTGATAGATGATTATACGAGAGATTAAGAGTGCTAAGGGTAGATATACCAGCAAGGCTTGGAGGAATGGCTCCTGAAATTTCATTTGACGAGAGGTCAAGGGACTCGAGATTTTTCAAACTACCTATGTTTTCAGGTATCCCACACGATAGATTGTTCCTTGACAAGTTCAGAAATCGAAGGCCTTGGAGGTTTGTTAACTCATCGGGGATGCATTCAGACAATGAGTTACCTGACAAATCAATACCCGTCATTAATTGAAGTGTTTTTTGGAAAATTATCTCCTGCCCCTTCCAGATTATATCGATTCTATCCTGATAGGTAGACCCATCTAATGATCCCGCACTGGATACAATTTTTGGATTCTTCATGGATGTTAAGTTGCCAAAAGATGTGGGAATCGACCCTGTCAAACTGTTGTTGGTCATATCTAGCAGTTGGAGTTGAGAAAGATGTGATAACTCAGAAGGAATTTCACCGGTGAAGTTGTTTGATCTAAGGCTAAGAATCTTCAAAGATGAAAGGCCTTTCCCAATCCAAGGAGGAATGCCACCAAAGAAATTGTTGTTCCCAATATCTAAAGTGACCAGCGTCTTGCATCCCTTTAGCGCTGATGGAAAAACACCGGTGAAGCCGTTGCCGGCAAGATGAACCGATTCAAGAGAACAATTGTAGCTTGTCTTGACTGCAGGGATTTCACCTGAGAAGCGGTTGTGGGAGAGGTCCATGAACTGCAGGCTCTGCAGATTCCACCAGCAGTCAGGCAGCTTACCGGTGAGCTTGTTGTTTGACAGGTCCAGGATCTGGAGAGAAAGCAACCTGCAAAAGGCCGAGCCGGAGCTGCTGTTGGAGGAGTTGCCGTTCAGGACGTTGTACTTCTCCGGCAT
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| CDS seq | ATGCCGGAGAAGTACAACGTCCTGAACGGCAACTCCTCCAACAGCAGCTCCGGCTCGGCCTTTTGCAGGTTGCTTTCTCTCCAGATCCTGGACCTGTCAAACAACAAGCTCACCGGTAAGCTGCCTGACTGCTGGTGGAATCTGCAGAGCCTGCAGTTCATGGACCTCTCCCACAACCGCTTCTCAGGTGAAATCCCTGCAGTCAAGACAAGCTACAATTGTTCTCTTGAATCGGTTCATCTTGCCGGCAACGGCTTCACCGGTGTTTTTCCATCAGCGCTAAAGGGATGCAAGACGCTGGTCACTTTAGATATTGGGAACAACAATTTCTTTGGTGGCATTCCTCCTTGGATTGGGAAAGGCCTTTCATCTTTGAAGATTCTTAGCCTTAGATCAAACAACTTCACCGGTGAAATTCCTTCTGAGTTATCACATCTTTCTCAACTCCAACTGCTAGATATGACCAACAACAGTTTGACAGGGTCGATTCCCACATCTTTTGGCAACTTAACATCCATGAAGAATCCAAAAATTGTATCCAGTGCGGGATCATTAGATGGGTCTACCTATCAGGATAGAATCGATATAATCTGGAAGGGGCAGGAGATAATTTTCCAAAAAACACTTCAATTAATGACGGGTATTGATTTGTCAGGTAACTCATTGTCTGAATGCATCCCCGATGAGTTAACAAACCTCCAAGGCCTTCGATTTCTGAACTTGTCAAGGAACAATCTATCGTGTGGGATACCTGAAAACATAGGTAGTTTGAAAAATCTCGAGTCCCTTGACCTCTCGTCAAATGAAATTTCAGGAGCCATTCCTCCAAGCCTTGCTGGTATATCTACCCTTAGCACTCTTAATCTCTCGTATAATCATCTATCAGGCAAGATACCCACCGGGAATCAACTTCAAACCTTCACTGACCCATCAATATACAGCCATAATTCGGGGCTCTGTGGCCCTCCGTTAAACATTTCATGCACAAATGCTTCAGTTGCGTCAGATGAGAGAGACTGTAGAACATGCGAGGACCAATATTTCTACTACTGTGTAATGGCTGGAGTGGTTTTCGGTTTTTGGCTATGGTTCGGAATGCTCCTTTCCATCGGAACCTGGAGGTATGCCATTTTCAGTTTTGTTGATGGCATGCAATGTAAAGTTATGCAGAAAGTCTCCTCTGTTGATAAATTTCTTTCAAGAGGAAATACTGATCAGTATTTGTAG
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| Protein seq | MPEKYNVLNGNSSNSSSGSAFCRLLSLQILDLSNNKLTGKLPDCWWNLQSLQFMDLSHNRFSGEIPAVKTSYNCSLESVHLAGNGFTGVFPSALKGCKTLVTLDIGNNNFFGGIPPWIGKGLSSLKILSLRSNNFTGEIPSELSHLSQLQLLDMTNNSLTGSIPTSFGNLTSMKNPKIVSSAGSLDGSTYQDRIDIIWKGQEIIFQKTLQLMTGIDLSGNSLSECIPDELTNLQGLRFLNLSRNNLSCGIPENIGSLKNLESLDLSSNEISGAIPPSLAGISTLSTLNLSYNHLSGKIPTGNQLQTFTDPSIYSHNSGLCGPPLNISCTNASVASDERDCRTCEDQYFYYCVMAGVVFGFWLWFGMLLSIGTWRYAIFSFVDGMQCKVMQKVSSVDKFLSRGNTDQYL |
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| Function | Receptor-like protein EIX2 [UniProtKB/Swiss-Prot:Q6JN46] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_10g0014060 | OsAzu_10g0014060.01 | Chr10 | 19074980 | 19076206 | - | NAM | ||
| CDS seq | ATGCCGGAGAAGTACAACGTCCTGAACGGCAACTCCTCCAACAGCAGCTCCGGCTCGGCCTTTTGCAGGTTGCTTTCTCTCCAGATCCTGGACCTGTCAAACAACAAGCTCACCGGTAAGCTGCCTGACTGCTGGTGGAATCTGCAGAGCCTGCAGTTCATGGACCTCTCCCACAACCGCTTCTCAGGTGAAATCCCTGCAGTCAAGACAAGCTACAATTGTTCTCTTGAATCGGTTCATCTTGCCGGCAACGGCTTCACCGGTGTTTTTCCATCAGCGCTAAAGGGATGCAAGACGCTGGTCACTTTAGATATTGGGAACAACAATTTCTTTGGTGGCATTCCTCCTTGGATTGGGAAAGGCCTTTCATCTTTGAAGATTCTTAGCCTTAGATCAAACAACTTCACCGGTGAAATTCCTTCTGAGTTATCACATCTTTCTCAACTCCAACTGCTAGATATGACCAACAACAGTTTGACAGGGTCGATTCCCACATCTTTTGGCAACTTAACATCCATGAAGAATCCAAAAATTGTATCCAGTGCGGGATCATTAGATGGGTCTACCTATCAGGATAGAATCGATATAATCTGGAAGGGGCAGGAGATAATTTTCCAAAAAACACTTCAATTAATGACGGGTATTGATTTGTCAGGTAACTCATTGTCTGAATGCATCCCCGATGAGTTAACAAACCTCCAAGGCCTTCGATTTCTGAACTTGTCAAGGAACAATCTATCGTGTGGGATACCTGAAAACATAGGTAGTTTGAAAAATCTCGAGTCCCTTGACCTCTCGTCAAATGAAATTTCAGGAGCCATTCCTCCAAGCCTTGCTGGTATATCTACCCTTAGCACTCTTAATCTCTCGTATAATCATCTATCAGGCAAGATACCCACCGGGAATCAACTTCAAACCTTCACTGACCCATCAATATACAGCCATAATTCGGGGCTCTGTGGCCCTCCGTTAAACATTTCATGCACAAATGCTTCAGTTGCGTCAGATGAGAGAGACTGTAGAACATGCGAGGACCAATATTTCTACTACTGTGTAATGGCTGGAGTGGTTTTCGGTTTTTGGCTATGGTTCGGAATGCTCCTTTCCATCGGAACCTGGAGGTATGCCATTTTCAGTTTTGTTGATGGCATGCAATGTAAAGTTATGCAGAAAGTCTCCTCTGTTGATAAATTTCTTTCAAGAGGAAATACTGATCAGTATTTGTAG
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| Protein seq | MPEKYNVLNGNSSNSSSGSAFCRLLSLQILDLSNNKLTGKLPDCWWNLQSLQFMDLSHNRFSGEIPAVKTSYNCSLESVHLAGNGFTGVFPSALKGCKTLVTLDIGNNNFFGGIPPWIGKGLSSLKILSLRSNNFTGEIPSELSHLSQLQLLDMTNNSLTGSIPTSFGNLTSMKNPKIVSSAGSLDGSTYQDRIDIIWKGQEIIFQKTLQLMTGIDLSGNSLSECIPDELTNLQGLRFLNLSRNNLSCGIPENIGSLKNLESLDLSSNEISGAIPPSLAGISTLSTLNLSYNHLSGKIPTGNQLQTFTDPSIYSHNSGLCGPPLNISCTNASVASDERDCRTCEDQYFYYCVMAGVVFGFWLWFGMLLSIGTWRYAIFSFVDGMQCKVMQKVSSVDKFLSRGNTDQYL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.425012 | 13.887116 | 1.809068 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0469700 | RBH | 3.825630 | 4.207063 | 2.395413 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g33140 | RBH | 2.551357 | 2.790517 | 0.608109 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0469700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0020780 | SBH | 0.134115 | 1.062366 | 0.983788 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0014270 | RBH | 0.088633 | 2.990202 | 1.026245 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0013710 | RBH | 0.0 | 6.074656 | 0.503720 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0014080 | RBH | 0.0 | 0.162103 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0013910 | RBH | 0.181931 | 21.960766 | 0.247718 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0288900 | RBH | 0.920844 | 3.1857625 | 0.5190845 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0014000 | RBH | 0.051356 | 0.765385 | 0.196250 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0310000 | RBH | 0.214798 | 2.377898 | 0.26135 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0013710 | RBH | 0.014096 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0013590 | SBH | 0.042996 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0013930 | SBH | 0.0 | 2.543053 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0013710 | RBH | 0.102975 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0014180 | RBH | 0.040970 | 2.252450 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G013900 | RBH | 0.0 | 0.476957 | 0.127443 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0013840 | RBH | 0.0 | 0.0 | 0.0 |
