Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_09g0014170 | OGI:09053720 | 3/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr09:18496633-18498056 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TGTAAATTGGTTAACGTATTTCTCCGAGACAAGTGAAGGAGCTAAAGGTGAAGAGAGCTTGCAACTTTACACATTTCATCAGACTCTCTTCATCATCCTGCTGGTGTGAATAAATATTTAGAGTTCCCAAGTGTGCAGAATGGGAAGGTTGAGGGAAGGCAAAAATACAGAAGCACTACTGCACTAGTGAGGCAGTGGCCTTCTCCTTTTTAAACTCAAAGGCTGGAGAATTTTTCTTCTATTACTATAGAGATACATCATCATTCATCAACACGAAATCTAAGACCAAAGGTCCAGTTGACTTGACTAGTTGACTCCTAGAAAGTAGAAAGTGTCATCCTAATTCCTTAGTTACTCATACACGTTTCCTAAACACATGAGGTTAAATAATTACATAATCATTTTTTTTGGATGAAAATTACACATTCAGTGTGACTCATATTAATTTGAATGGGAACTATACACCCAATGCGGCTCAAATATTTTCAAAGAAATTGCGCAGCCAATGTGGAGACAGATTTATGACTTGGTCCATTCAAATACATGAACTATGACAGCTTTTTGTCTGGCTTAGTTTACAATTTTCGTTTTATAGTCTATTAGTTTTCAAGAAGGCAAAATATCATGGTTGTACATTAACCAATTTGCAGGCCTACTATAAATTCTCACGGAAGCAATATTTTTTGGAGTTCTCCTTTTTAAACTGGTATAGAGGTAGCATGAACAGTGTTAATGTGTTATCCAGTAGGTGCATCTTGCACTAGGGACAACAATTATACGCATAGATATAGAAAGGAGGGCATCAGAGCCATTGGGGGGGGGGGGGTGATTTAATAACTGAATTTCCTTTCACTAAAGAAATGGTGAAGTCTCTTATGCAGCATAGGAGTACTTCCGGCATGAAGAAACAGTCAAAATGTGGACATATTGATACACCGACTGAAGCAACTAAGTTAGGAAAGAAATGAGCTTGAATAATCAGTAAGCTGAAGGATGTGTTGTTTGCAACTTGCAAGTTGACCCTTTTACTTGATTTTCTCCATCCAATGGATTTTCTTTTACCGGGTTTGCTTAAGTCAAAGAAATCGAGATATACCTTCTTCTAGACAGGCGCGATGGCGAATATTCCATCAGAAAGAGGAGGAGGAGGTGACCTCCGGCGACGGTGCTTGTCGGCGCATCACACGGCCATTACATCGAACAGCTCACGTGCAGCACCGGAGATTGAGCGCACGAGAGCGGAAAGCCCGGTGACGGCGGCGCCCACATCTCGACGGTTGCGGCGGCCACCGCCGCCGCCGCCGCCGCTAGCTTCTGCCACGGCGAAGGCCAGGGTACCCCCCGCGTCATCTTCCCGTTCGCCGGTGAGGCGGTGATCGCCGCTACAGGAGAAGGGGGAAAGACGAGAAGACATATTTGCGGAC
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| CDS seq | ATGTCTTCTCGTCTTTCCCCCTTCTCCTGTAGCGGCGATCACCGCCTCACCGGCGAACGGGAAGATGACGCGGGGGGTACCCTGGCCTTCGCCGTGGCAGAAGCTAGCGGCGGCGGCGGCGGCGGTGGCCGCCGCAACCGTCGAGATGTGGGCGCCGCCGTCACCGGGCTTTCCGCTCTCGTGCGCTCAATCTCCGGTGCTGCACGTGAGCTGTTCGATGTAATGGCCGTGTGA |
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| Protein seq | MSSRLSPFSCSGDHRLTGEREDDAGGTLAFAVAEASGGGGGGGRRNRRDVGAAVTGLSALVRSISGAARELFDVMAV |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_09g0014170 | OsAzu_09g0014170.01 | Chr09 | 18496633 | 18498056 | - | NAM | ||
| CDS seq | ATGTCTTCTCGTCTTTCCCCCTTCTCCTGTAGCGGCGATCACCGCCTCACCGGCGAACGGGAAGATGACGCGGGGGGTACCCTGGCCTTCGCCGTGGCAGAAGCTAGCGGCGGCGGCGGCGGCGGTGGCCGCCGCAACCGTCGAGATGTGGGCGCCGCCGTCACCGGGCTTTCCGCTCTCGTGCGCTCAATCTCCGGTGCTGCACGTGAGCTGTTCGATGTAATGGCCGTGTGA
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| Protein seq | MSSRLSPFSCSGDHRLTGEREDDAGGTLAFAVAEASGGGGGGGRRNRRDVGAAVTGLSALVRSISGAARELFDVMAV |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0014300 | SBH | 0.158131 | 2.597712 | 0.170243 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0307400 | RBH | 0.1180815 | 1.093326 | 0.429609 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0014190 | SBH | 0.000000 | 0.000000 | 0.109314 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0297600 | RBH | 0.530318 | 1.447696 | 2.8422325 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0014270 | SBH | 0.071551 | 4.118673 | 0.730405 |
