Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsAzu_08g0010960 OGI:06027190 | 16/16 Azucena | AzucenaRS1 | Gramene(+IsoSeq) Chr08:12842250-12843707
Gene Symbol -
DNA seq

TTATACTAGTGCAAGGCAAATAATATGAATGCATATATGAAATGCTAAGTGGTAAAGAGCAATATGCTTACAATTAATGATCACAAAATAAAGTGATATGTTTCCTGTTGCATTTGCAACACTACAAGATTGATTAAGTGAATTACCAGCAAGTATTTTCAGTACGTACTCCCTCCTGAGAGACTCTGGAAGAGCGAGAAGCATACTCATTTGAGCCGGCACTTTTACAAAAGCAGCTGCAGCATTGACAACTTCAGTACCAGTCAATCCAAGCTTTTGACACTCAAGAATAGCTTCGTTCTGAATTTTTTTTGTAGTGGGTCCTCCTCAGCCATTGCCTTCTCTTGGATCTCAGCTTCACGTTGCATAGATGCCACCATTGCTCCCACATGCTTTGTAACATCCCTCAGATCACCTTGAACATTGGCAAAGACATCCATAAAAGGGTCACTTGACAAGGTATTTTTCAGTTTGTTGTTGTCTTTCTTCCTCTTCTTAGAGCTTGAAGCAGTTGAATCAATGCTCCGTCGAGGTGTGGCTGAATCGATGCTCCGTCGAGCTGCAGCTGAATCGATGCTCCGTCGAGCTGCAGCTGAATCGATGCTCCGCCGAGGCGTTTCTCTAGACACTCTCTCTTCATCCTCCTCATCTTCTTCATCTTGAATATCTTGAACAATTTCTTTCTCCATATTAGCAACAGCCTCACCAAGACCCTCTGCACCTTCTCCAGTAGCAATGTCTTTACCATAAATTGCAGCTAGTGTATCATAGTGAGGGAATGCTACACCATATAGACCCTTTGCCTCATTGTTTTTCTGTAAAATACAAAGAATGACACAAAATTAAGGTCATGGTTCAGCAAGCAAAAGAGAGACCTATGCAGCTACAATTGCATGAAAAACACAAGAGAACATATGTATGAGAAAGCATACTACTAGAAAACCATAATGTTGTCTTTGCAAACATTTCAGAGGAATTTTACATAGCCGCTTATTTGGAACAAAATTTCATAAAATATCTTACAGTAGTTTCACATATTTCAATTCAATGCACTCATGAATCAATAAATAAATTTTCTACTCCATAGTTAGTTTGATGACTTACCCTGCAATGATCATCGTATTGTTGTTTCTCACATTGTATCATCTTTCTATTGTCATCCCAAGAAAAGCCACTTTTGGTTAGCATCACTTCAATTGCGCCAAACTTGGTCCTAAAGTGTCTTACTCTCGACTCTATGTGCGGAACAGCAGTAAGGCCAGAACTTGGCAACTTCTTAGCAAGCACGTTCTCTAGAACTTGGCAGTATCCATTTTTGAAACCCCCTTCTGATTTCCAGCTTGGATCCAAAGCAATCTCGAACAATGCCTTGATCAGCTCCTCATCCTCAAAGTACGTCCAAATCCTCTTGTTCTTGCCTCTCCCACGCACAATGCTTGAGCTTCCAAGATGCTCCAT

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CDS seq

ATGGAGCATCTTGGAAGCTCAAGCATTGTGCGTGGGAGAGGCAAGAACAAGAGGATTTGGACGTACTTTGAGGATGAGGAGCTGATCAAGGCATTGTTCGAGATTGCTTTGGATCCAAGCTGGAAATCAGAAGGGGGTTTCAAAAATGGATACTGCCAAGTTCTAGAGAACGTGCTTGCTAAGAAGTTGCCAAGTTCTGGCCTTACTGCTGTTCCGCACATAGAGTCGAGAGTAAGACACTTTAGGACCAAGTTTGGCGCAATTGAAGTGATGCTAACCAAAAGTGGCTTTTCTTGGGATGACAATAGAAAGATGATACAATGTGAGAAACAACAATACGATGATCATTGCAGGAAAAACAATGAGGCAAAGGGTCTATATGGTGTAGCATTCCCTCACTATGATACACTAGCTGCAATTTATGGTAAAGACATTGCTACTGGAGAAGGTGCAGAGGGTCTTGGTGAGGCTGTTGCTAATATGGAGAAAGAAATTGTTCAAGATATTCAAGATGAAGAAGATGAGGAGGATGAAGAGAGAGTGTCTAGAGAAACGCCTCGGCGGAGCATCGATTCAGCTGCAGCTCGACGGAGCATCGATTCAGCTGCAGCTCGACGGAGCATCGATTCAGCCACACCTCGACGGAGCATTGATTCAACTGCTTCAAGCTCTAAGAAGAGGAAGAAAGACAACAACAAACTGAAAAATACCTTGTCAAGTGACCCTTTTATGGATGTCTTTGCCAATGTTCAAGGTGATCTGAGGGATGTTACAAAGCATGTGGGAGCAATGGTGGCATCTATGCAACGTGAAGCTGAGATCCAAGAGAAGGCAATGGCTGAGGAGGACCCACTACAAAAAAAATTCAGAACGAAGCTATTCTTGAGTCTTGGATTGACTGGTACTGAAGTTGTCAATGCTGCAGCTGCTTTTGTAAAAGTGCCGGCTCAAATGAGTATGCTTCTCGCTCTTCCAGAGTCTCTCAGGAGGGAGTACGTACTGAAAATACTTGCTGGTAATTCACTTAATCAATCTTGTAGTGTTGCAAATGCAACAGGAAACATATCACTTTATTTTGTGATCATTAATTGTAAGCATATTGCTCTTTACCACTTAGCATTTCATATATGCATTCATATTATTTGCCTTGCACTAGTATAA

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Protein seq

MEHLGSSSIVRGRGKNKRIWTYFEDEELIKALFEIALDPSWKSEGGFKNGYCQVLENVLAKKLPSSGLTAVPHIESRVRHFRTKFGAIEVMLTKSGFSWDDNRKMIQCEKQQYDDHCRKNNEAKGLYGVAFPHYDTLAAIYGKDIATGEGAEGLGEAVANMEKEIVQDIQDEEDEEDEERVSRETPRRSIDSAAARRSIDSAAARRSIDSATPRRSIDSTASSSKKRKKDNNKLKNTLSSDPFMDVFANVQGDLRDVTKHVGAMVASMQREAEIQEKAMAEEDPLQKKFRTKLFLSLGLTGTEVVNAAAAFVKVPAQMSMLLALPESLRREYVLKILAGNSLNQSCSVANATGNISLYFVIINCKHIALYHLAFHICIHIICLALV

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsAzu_08g0010960 OsAzu_08g0010960.01 Chr08 12842250 12843707 - NAM
CDS seq

ATGGAGCATCTTGGAAGCTCAAGCATTGTGCGTGGGAGAGGCAAGAACAAGAGGATTTGGACGTACTTTGAGGATGAGGAGCTGATCAAGGCATTGTTCGAGATTGCTTTGGATCCAAGCTGGAAATCAGAAGGGGGTTTCAAAAATGGATACTGCCAAGTTCTAGAGAACGTGCTTGCTAAGAAGTTGCCAAGTTCTGGCCTTACTGCTGTTCCGCACATAGAGTCGAGAGTAAGACACTTTAGGACCAAGTTTGGCGCAATTGAAGTGATGCTAACCAAAAGTGGCTTTTCTTGGGATGACAATAGAAAGATGATACAATGTGAGAAACAACAATACGATGATCATTGCAGGAAAAACAATGAGGCAAAGGGTCTATATGGTGTAGCATTCCCTCACTATGATACACTAGCTGCAATTTATGGTAAAGACATTGCTACTGGAGAAGGTGCAGAGGGTCTTGGTGAGGCTGTTGCTAATATGGAGAAAGAAATTGTTCAAGATATTCAAGATGAAGAAGATGAGGAGGATGAAGAGAGAGTGTCTAGAGAAACGCCTCGGCGGAGCATCGATTCAGCTGCAGCTCGACGGAGCATCGATTCAGCTGCAGCTCGACGGAGCATCGATTCAGCCACACCTCGACGGAGCATTGATTCAACTGCTTCAAGCTCTAAGAAGAGGAAGAAAGACAACAACAAACTGAAAAATACCTTGTCAAGTGACCCTTTTATGGATGTCTTTGCCAATGTTCAAGGTGATCTGAGGGATGTTACAAAGCATGTGGGAGCAATGGTGGCATCTATGCAACGTGAAGCTGAGATCCAAGAGAAGGCAATGGCTGAGGAGGACCCACTACAAAAAAAATTCAGAACGAAGCTATTCTTGAGTCTTGGATTGACTGGTACTGAAGTTGTCAATGCTGCAGCTGCTTTTGTAAAAGTGCCGGCTCAAATGAGTATGCTTCTCGCTCTTCCAGAGTCTCTCAGGAGGGAGTACGTACTGAAAATACTTGCTGGTAATTCACTTAATCAATCTTGTAGTGTTGCAAATGCAACAGGAAACATATCACTTTATTTTGTGATCATTAATTGTAAGCATATTGCTCTTTACCACTTAGCATTTCATATATGCATTCATATTATTTGCCTTGCACTAGTATAA

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Protein seq

MEHLGSSSIVRGRGKNKRIWTYFEDEELIKALFEIALDPSWKSEGGFKNGYCQVLENVLAKKLPSSGLTAVPHIESRVRHFRTKFGAIEVMLTKSGFSWDDNRKMIQCEKQQYDDHCRKNNEAKGLYGVAFPHYDTLAAIYGKDIATGEGAEGLGEAVANMEKEIVQDIQDEEDEEDEERVSRETPRRSIDSAAARRSIDSAAARRSIDSATPRRSIDSTASSSKKRKKDNNKLKNTLSSDPFMDVFANVQGDLRDVTKHVGAMVASMQREAEIQEKAMAEEDPLQKKFRTKLFLSLGLTGTEVVNAAAAFVKVPAQMSMLLALPESLRREYVLKILAGNSLNQSCSVANATGNISLYFVIINCKHIALYHLAFHICIHIICLALV

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_08g0305000 RBH 1.205659 1.858729 0.541977
Nipponbare | IRGSP 1.0 | MSU LOC_Os04g50050 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os08g0305000 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_04g0024790 SBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_08g0017740 SBH 0.0 0.000000 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_08g0011160 RBH 0.0 0.0 0.000000
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_08g0011010 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_08g0010710 RBH 5.929146 3.235940 3.540273
Minghui 63 | MH63RS3 | HZAU OsMH63_04G0216600 SBH 0.0367205 0 0.013047
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_08g0010740 RBH 0.106265 0.148009 0.554968
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_04G0474900 SBH 0.005117 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_08g0017060 SBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_08g0010460 RBH 0.188132 0.000000 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_04g0024360 SBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_06g0026250 SBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_08g0010400 RBH 0.000000 0.000000 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_06G025730 SBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_08g0010560 RBH 1.869579 2.719005 1.022905
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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