Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsAzu_06g0025750 | OGI:06077730 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr06:27852680-27856368 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | ATGGATGTTGCGGCCGCCGCGGGCGTCGTTGGTGGGTTCTTGCAGGTCGTCTTCGACAAGTACTACGGCTCCAAGCTCGAGCAGTGGGCTGCTCGCTCGGGCCTGCACGGCGACTTCCTCAGCCTCAAGAACCAGCTCCACATGGTCCGTGCCATGCTCGAGGCAGGCGGCGGCGGCAACGCCCCCCACAACGACTCCCTGCGCAGCCTCATCGTGGAGCTCAAATCCGCTGCCTACGCCGCCGACAACGTGCTCGACGAGATGGAGTACTACCGCCTCAAGGAGCTCGTCGAGGACACCAGTGGCCGCGACGGCGGCGCACCGTCGTCGTCGGCTCGCCAGGTGGTCGGCCGCATACTGGTGCCTGCGCCTCTCCTGTCCAATCCATTCAAGCGAGCCAGGACGGGCGCCGACGAAGCCTTGCAAGGGCAGGGCGCTGACACGGACACCCCCAACTTCGATCAGGATGCAATGTCCTCCAAGATCAAATCGATATCCTGCTGCCTCGAGCAGATTGCTGGCATGGTGCGGAGGATCATCGAGCTCGACAAGTTGGTGTCGATGGCGAGCTTAGGGCATGTACAACCAGAGGTGGTGGTAAGTCTGCGGCAGACAAGCTCCTTTCCCACTGAAACTAAGTTGTTTGGGAGAGATGAGTCTACCAACAACATCATAAACCTTATGCTTAGAACAGATATGGAGTCTAGGTACAATAACTTCAATGTTCTTCCCATTGTTGGCATTGGTGGAGTTGGTAAGACTGCTCTTGCCCAGTCTGTCTACAATCATCAAAGAGTAGTTGATTCATTTCAAGTGAGAGCCTGGGCATGCGTTTCTGATACTCTTGATGTGCGCAGAGTTATAGCAGATTTGATAGATTCGATCGATGGTGGCCAAGAAACTCCCAAGTTTCATAGAGTGCCTAGTCTTGATGCAACTCAGAGAACTCTACTGAGGAAAATTGAAGGGAAGAGGTTCTTGATTGTCCTTGATGATGTGTGGGTCAGCAGCCACTGGGAGAAGCTTTGTGGTCCCTTCTCCGCGGGGATGTCTGGAAGCATGGTTTTAGTTACAACGCGACAGAGAAAAATCGCCAAGGCCATGGGCACATTTGACAGTTTGACACTGCACGGTTTACATGATAATGAATTTTGGGCTTTCTTCCTACAGTGCACAAACATCACAGAGGACCACAGCTTGGCTCGAATAGGCAGGAAAATAGCTCTCAAGTTGTATGGCAACCCCTTGGCTGCCAAGACCATGGGGAGATTCCTTTCGGAAAACCACGAGGAGGAGCATTGGTGCAAGTTTCTGAATAGAAACATATGGGAACTAAAACAAGAGCCTGACGACGTTATGCCGGTTTTGTTGTTGAGTTATCAGCATCTCCCTCTAAGCTTGCAGCGATGTTTCACCTATTGTGCCATATTTCCAAGAGGCTATAAGTTCACTGAGCAAGAGCTTATATTTGCTTGGATGGCACAAGGCCTTGTTCCAACACCTGGAGAGGATCAGACATTGGAAGATGTAGGAAAGGAGTACCTTAACGAGTTACTCAGTTGCTCATTCTTCCATATAATCGAGAGTGGCCACTACATGATACCTGGGTTGTTACATGATCTTGCTCAACTTGTTGCAGAAGGGGAATTCCAGGCAACTAATGGTAAATTCCCTATCTCAGTTGAGGCTTGTCACTTGTATATCTCTCATTCTGATCATGCTCGTGATATGGGCTTATGTCATCCACTCGATTGTTCTGGTATTCAGATGAAACGCCGCATCCAAAAGAACTCATGGGCTGGCTTGCTGCATCTAAAAAATTTGCGGACTATAATGTTCTCTGCCTCTTCATCAATTTGGTCTCCAGGTTCTGAGGTAGTCTTTGTCCAGAGCAATTGGCCTAGTACTATCAGACTGTTGTCTCTGCCCTGCACTTTCCGAAAAGAGCAACTTGCAGCAGTTAGTAACTTCATACATTTGCGTTACCTAGACCTCAGATGGTCACGCCTTGAAGAATTACCTGAAGCCGTATGCAAGCTTTACCTACTACAAGTTTTGAACATAAAGCACTGTCCGTGCCTTCTTCATTTACCTCCAAGGATAGCCAACTTATTAAACTTTGAGCATCTGATTGCTGATGAAGGAAAACATTTACTCACAGGAGTTCCATGTGTTGGCAATATGACTTCCTTGCTTCTGTTGGATAAGTTCTGTGTTAGGAAAACCAGGGGCTTTGACATTGGACAACTGAAAAGGTTGAGGAACCTAAGAGGTTTGTTGAAAGTTCAGAATCTCGAGAATGTTGATGGCAATGAAGAAGCAGCAAAGGCTAGATTGAGTGACAAAAGGCACCTAACTGAGCTGTGGCTGTCATGGAGTGCCGGTTCTTGTGTACAAGAGCCTTCAGAACAATACCACGTCCTGGAAGGTCTTGCACCACATTCAAATGTAAGTTGTCTCCATATTACAGGCTATAGGGGCAGTACTACCCCATCATGGCTTGCTAGTAATCTCAGCCTTAGCTCACTAGAATATCTTTATCTAGATTATTGTTCTGAATTGGAAATTCTTCCTCCACTGGGACTCCTCCCTCACCTTAGGAAGCTGCATATAGTCAATATGCACGCGCTAAGAAGAATTGGCTCTGAGTTCTATAGCAGTGGTCAGGTGGTGGGGTTTCCATGTTTGGAAGGGCTATTTATCAAAACAATGCCAGAATTGGAAGACTGGAATGTAGATGACTCCAATGTTTTCCCTAGCCTGACCAGTTTGACTGTAGAAGATTGTCCCAAGCTGAGTAGAATTCCTAGTTTTCTATGGAGTAGAGAAAACAAGTGTTGGTTCCCAAAGCTTGGTAAAATCAACATCAAATACTGTCCTGAATTGGTGCTGTCAGAAGCCCTCCTTATTCCACGCTTGCCTTGGCTCCTTGATATAGACATTCAAATTTGGGGACAAACAGTGATAAATTTGCGTGGTGGCTGTCTTGAGGTTTCTGAAATCAATGCTAATACTAGCTCAGGCCCAATAAATGCTGTTCTACAATTGCATTGGCTAAAACATGTGTCTAGTTTTCATATTTGGGCACAGGACAGTCTTTCTGTACACCCCTGCAAGCAAAAGACAGAACCATCAGCATGTAATTCTGAACACATGGTAAATTCTCTACAAACATCAGCAGAGAAAGTTGAAGTCACAGGGTATGGTATTACTGATGAATTATTGTCAGCAATTTTGGAGAATGAAATCTGTCCTTCAAGTTTATCTATATCAGATTGTCCACAAATAACATCTCTTGATCTTAGTCCCCTAAGATCATTAAAATCTCTGGTAATACACAATTGTGTATCACTAAGAAAACTCTTTGACCGACAATATTTCACTGCTCTTAGGGATTTGGAAGTGACCAATGCATCAAGTTTTGCTGAAGCATGGAGTGAACTGTTAGGATCCAGATATGCAGAGTGGGGTCAAGTTACTACCTCACTGGAATCTCTTACAGTTGACAGCACCTTATTCCTCAACTCCCCTTTGTGTGCAGTGCTCACTTCTCTGAAGAAGCTAACAATTCATTCGGATTTCAGGGTCACTTCCCTCTCAAGACAACAGGTGCAGGCACTTCTACTCTTAACCTCTCTGCAAGATCTTGGGTTTATACAATGCTGCAATCTACATTCTCTTCCCAGTGA
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CDS seq | ATGGATGTTGCGGCCGCCGCGGGCGTCGTTGGTGGGTTCTTGCAGGTCGTCTTCGACAAGTACTACGGCTCCAAGCTCGAGCAGTGGGCTGCTCGCTCGGGCCTGCACGGCGACTTCCTCAGCCTCAAGAACCAGCTCCACATGGTCCGTGCCATGCTCGAGGCAGGCGGCGGCGGCAACGCCCCCCACAACGACTCCCTGCGCAGCCTCATCGTGGAGCTCAAATCCGCTGCCTACGCCGCCGACAACGTGCTCGACGAGATGGAGTACTACCGCCTCAAGGAGCTCGTCGAGGACACCAGTGGCCGCGACGGCGGCGCACCGTCGTCGTCGGCTCGCCAGGTGGTCGGCCGCATACTGGTGCCTGCGCCTCTCCTGTCCAATCCATTCAAGCGAGCCAGGACGGGCGCCGACGAAGCCTTGCAAGGGCAGGGCGCTGACACGGACACCCCCAACTTCGATCAGGATGCAATGTCCTCCAAGATCAAATCGATATCCTGCTGCCTCGAGCAGATTGCTGGCATGGTGCGGAGGATCATCGAGCTCGACAAGTTGGTGTCGATGGCGAGCTTAGGGCATGTACAACCAGAGGTGGTGGTAAGTCTGCGGCAGACAAGCTCCTTTCCCACTGAAACTAAGTTGTTTGGGAGAGATGAGTCTACCAACAACATCATAAACCTTATGCTTAGAACAGATATGGAGTCTAGGTACAATAACTTCAATGTTCTTCCCATTGTTGGCATTGGTGGAGTTGGTAAGACTGCTCTTGCCCAGTCTGTCTACAATCATCAAAGAGTAGTTGATTCATTTCAAGTGAGAGCCTGGGCATGCGTTTCTGATACTCTTGATGTGCGCAGAGTTATAGCAGATTTGATAGATTCGATCGATGGTGGCCAAGAAACTCCCAAGTTTCATAGAGTGCCTAGTCTTGATGCAACTCAGAGAACTCTACTGAGGAAAATTGAAGGGAAGAGGTTCTTGATTGTCCTTGATGATGTGTGGGTCAGCAGCCACTGGGAGAAGCTTTGTGGTCCCTTCTCCGCGGGGATGTCTGGAAGCATGGTTTTAGTTACAACGCGACAGAGAAAAATCGCCAAGGCCATGGGCACATTTGACAGTTTGACACTGCACGGTTTACATGATAATGAATTTTGGGCTTTCTTCCTACAGTGCACAAACATCACAGAGGACCACAGCTTGGCTCGAATAGGCAGGAAAATAGCTCTCAAGTTGTATGGCAACCCCTTGGCTGCCAAGACCATGGGGAGATTCCTTTCGGAAAACCACGAGGAGGAGCATTGGTGCAAGTTTCTGAATAGAAACATATGGGAACTAAAACAAGAGCCTGACGACGTTATGCCGGTTTTGTTGTTGAGTTATCAGCATCTCCCTCTAAGCTTGCAGCGATGTTTCACCTATTGTGCCATATTTCCAAGAGGCTATAAGTTCACTGAGCAAGAGCTTATATTTGCTTGGATGGCACAAGGCCTTGTTCCAACACCTGGAGAGGATCAGACATTGGAAGATGTAGGAAAGGAGTACCTTAACGAGTTACTCAGTTGCTCATTCTTCCATATAATCGAGAGTGGCCACTACATGATACCTGGGTTGTTACATGATCTTGCTCAACTTGTTGCAGAAGGGGAATTCCAGGCAACTAATGGAGTTCCATGTGTTGGCAATATGACTTCCTTGCTTCTGTTGGATAAGTTCTGTGTTAGGAAAACCAGGGGCTTTGACATTGGACAACTGAAAAGGTTGAGGAACCTAAGAGGTTTGTTGAAAGTTCAGAATCTCGAGAATGTTGATGGCAATGAAGAAGCAGCAAAGGCTAGATTGAGTGACAAAAGGCACCTAACTGAGCTGTGGCTGTCATGGAGTGCCGGTTCTTGTGTACAAGAGCCTTCAGAACAATACCACGTCCTGGAAGGTCTTGCACCACATTCAAATGACAGTCTTTCTGTACACCCCTGCAAGCAAAAGACAGAACCATCAGCATGTAATTCTGAACACATGGTAAATTCTCTACAAACATCAGCAGAGAAAGTTGAAGTCACAGGTGCTCACTTCTCTGAAGAAGCTAACAATTCATTCGGATTTCAGGGTCACTTCCCTCTCAAGACAACAGGTGCAGGCACTTCTACTCTTAACCTCTCTGCAAGATCTTGGGTTTATACAATGCTGCAATCTACATTCTCTTCCCAGTGA
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Protein seq | MDVAAAAGVVGGFLQVVFDKYYGSKLEQWAARSGLHGDFLSLKNQLHMVRAMLEAGGGGNAPHNDSLRSLIVELKSAAYAADNVLDEMEYYRLKELVEDTSGRDGGAPSSSARQVVGRILVPAPLLSNPFKRARTGADEALQGQGADTDTPNFDQDAMSSKIKSISCCLEQIAGMVRRIIELDKLVSMASLGHVQPEVVVSLRQTSSFPTETKLFGRDESTNNIINLMLRTDMESRYNNFNVLPIVGIGGVGKTALAQSVYNHQRVVDSFQVRAWACVSDTLDVRRVIADLIDSIDGGQETPKFHRVPSLDATQRTLLRKIEGKRFLIVLDDVWVSSHWEKLCGPFSAGMSGSMVLVTTRQRKIAKAMGTFDSLTLHGLHDNEFWAFFLQCTNITEDHSLARIGRKIALKLYGNPLAAKTMGRFLSENHEEEHWCKFLNRNIWELKQEPDDVMPVLLLSYQHLPLSLQRCFTYCAIFPRGYKFTEQELIFAWMAQGLVPTPGEDQTLEDVGKEYLNELLSCSFFHIIESGHYMIPGLLHDLAQLVAEGEFQATNGVPCVGNMTSLLLLDKFCVRKTRGFDIGQLKRLRNLRGLLKVQNLENVDGNEEAAKARLSDKRHLTELWLSWSAGSCVQEPSEQYHVLEGLAPHSNDSLSVHPCKQKTEPSACNSEHMVNSLQTSAEKVEVTGAHFSEEANNSFGFQGHFPLKTTGAGTSTLNLSARSWVYTMLQSTFSSQ |
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Function | Putative disease resistance protein RGA1 [UniProtKB/Swiss-Prot:Q7XA42] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsAzu_06g0025750 | OsAzu_06g0025750.01 | Chr06 | 27852680 | 27856368 | + | NAM | ||
CDS seq | ATGGATGTTGCGGCCGCCGCGGGCGTCGTTGGTGGGTTCTTGCAGGTCGTCTTCGACAAGTACTACGGCTCCAAGCTCGAGCAGTGGGCTGCTCGCTCGGGCCTGCACGGCGACTTCCTCAGCCTCAAGAACCAGCTCCACATGGTCCGTGCCATGCTCGAGGCAGGCGGCGGCGGCAACGCCCCCCACAACGACTCCCTGCGCAGCCTCATCGTGGAGCTCAAATCCGCTGCCTACGCCGCCGACAACGTGCTCGACGAGATGGAGTACTACCGCCTCAAGGAGCTCGTCGAGGACACCAGTGGCCGCGACGGCGGCGCACCGTCGTCGTCGGCTCGCCAGGTGGTCGGCCGCATACTGGTGCCTGCGCCTCTCCTGTCCAATCCATTCAAGCGAGCCAGGACGGGCGCCGACGAAGCCTTGCAAGGGCAGGGCGCTGACACGGACACCCCCAACTTCGATCAGGATGCAATGTCCTCCAAGATCAAATCGATATCCTGCTGCCTCGAGCAGATTGCTGGCATGGTGCGGAGGATCATCGAGCTCGACAAGTTGGTGTCGATGGCGAGCTTAGGGCATGTACAACCAGAGGTGGTGGTAAGTCTGCGGCAGACAAGCTCCTTTCCCACTGAAACTAAGTTGTTTGGGAGAGATGAGTCTACCAACAACATCATAAACCTTATGCTTAGAACAGATATGGAGTCTAGGTACAATAACTTCAATGTTCTTCCCATTGTTGGCATTGGTGGAGTTGGTAAGACTGCTCTTGCCCAGTCTGTCTACAATCATCAAAGAGTAGTTGATTCATTTCAAGTGAGAGCCTGGGCATGCGTTTCTGATACTCTTGATGTGCGCAGAGTTATAGCAGATTTGATAGATTCGATCGATGGTGGCCAAGAAACTCCCAAGTTTCATAGAGTGCCTAGTCTTGATGCAACTCAGAGAACTCTACTGAGGAAAATTGAAGGGAAGAGGTTCTTGATTGTCCTTGATGATGTGTGGGTCAGCAGCCACTGGGAGAAGCTTTGTGGTCCCTTCTCCGCGGGGATGTCTGGAAGCATGGTTTTAGTTACAACGCGACAGAGAAAAATCGCCAAGGCCATGGGCACATTTGACAGTTTGACACTGCACGGTTTACATGATAATGAATTTTGGGCTTTCTTCCTACAGTGCACAAACATCACAGAGGACCACAGCTTGGCTCGAATAGGCAGGAAAATAGCTCTCAAGTTGTATGGCAACCCCTTGGCTGCCAAGACCATGGGGAGATTCCTTTCGGAAAACCACGAGGAGGAGCATTGGTGCAAGTTTCTGAATAGAAACATATGGGAACTAAAACAAGAGCCTGACGACGTTATGCCGGTTTTGTTGTTGAGTTATCAGCATCTCCCTCTAAGCTTGCAGCGATGTTTCACCTATTGTGCCATATTTCCAAGAGGCTATAAGTTCACTGAGCAAGAGCTTATATTTGCTTGGATGGCACAAGGCCTTGTTCCAACACCTGGAGAGGATCAGACATTGGAAGATGTAGGAAAGGAGTACCTTAACGAGTTACTCAGTTGCTCATTCTTCCATATAATCGAGAGTGGCCACTACATGATACCTGGGTTGTTACATGATCTTGCTCAACTTGTTGCAGAAGGGGAATTCCAGGCAACTAATGGAGTTCCATGTGTTGGCAATATGACTTCCTTGCTTCTGTTGGATAAGTTCTGTGTTAGGAAAACCAGGGGCTTTGACATTGGACAACTGAAAAGGTTGAGGAACCTAAGAGGTTTGTTGAAAGTTCAGAATCTCGAGAATGTTGATGGCAATGAAGAAGCAGCAAAGGCTAGATTGAGTGACAAAAGGCACCTAACTGAGCTGTGGCTGTCATGGAGTGCCGGTTCTTGTGTACAAGAGCCTTCAGAACAATACCACGTCCTGGAAGGTCTTGCACCACATTCAAATGACAGTCTTTCTGTACACCCCTGCAAGCAAAAGACAGAACCATCAGCATGTAATTCTGAACACATGGTAAATTCTCTACAAACATCAGCAGAGAAAGTTGAAGTCACAGGTGCTCACTTCTCTGAAGAAGCTAACAATTCATTCGGATTTCAGGGTCACTTCCCTCTCAAGACAACAGGTGCAGGCACTTCTACTCTTAACCTCTCTGCAAGATCTTGGGTTTATACAATGCTGCAATCTACATTCTCTTCCCAGTGA
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Protein seq | MDVAAAAGVVGGFLQVVFDKYYGSKLEQWAARSGLHGDFLSLKNQLHMVRAMLEAGGGGNAPHNDSLRSLIVELKSAAYAADNVLDEMEYYRLKELVEDTSGRDGGAPSSSARQVVGRILVPAPLLSNPFKRARTGADEALQGQGADTDTPNFDQDAMSSKIKSISCCLEQIAGMVRRIIELDKLVSMASLGHVQPEVVVSLRQTSSFPTETKLFGRDESTNNIINLMLRTDMESRYNNFNVLPIVGIGGVGKTALAQSVYNHQRVVDSFQVRAWACVSDTLDVRRVIADLIDSIDGGQETPKFHRVPSLDATQRTLLRKIEGKRFLIVLDDVWVSSHWEKLCGPFSAGMSGSMVLVTTRQRKIAKAMGTFDSLTLHGLHDNEFWAFFLQCTNITEDHSLARIGRKIALKLYGNPLAAKTMGRFLSENHEEEHWCKFLNRNIWELKQEPDDVMPVLLLSYQHLPLSLQRCFTYCAIFPRGYKFTEQELIFAWMAQGLVPTPGEDQTLEDVGKEYLNELLSCSFFHIIESGHYMIPGLLHDLAQLVAEGEFQATNGVPCVGNMTSLLLLDKFCVRKTRGFDIGQLKRLRNLRGLLKVQNLENVDGNEEAAKARLSDKRHLTELWLSWSAGSCVQEPSEQYHVLEGLAPHSNDSLSVHPCKQKTEPSACNSEHMVNSLQTSAEKVEVTGAHFSEEANNSFGFQGHFPLKTTGAGTSTLNLSARSWVYTMLQSTFSSQ
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.000000 | 2.376935 | 0.638857 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0667900 | RBH | 0.0 | 0.141815 | 0.000000 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g45690 | RBH | 0.0 | 0.078270 | 0.071395 |
Nipponbare | IRGSP 1.0 | RAP-db | Os06g0667900 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0006880 | RBH | 0.0 | 0.666139 | 0.494445 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0025560 | RBH | 0.000000 | 1.141305 | 0.203667 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0025740 | RBH | 0.0 | 2.019442 | 1.347823 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0025340 | RBH | 0.0 | 0.000000 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0025820 | RBH | 0.472539 | 0.797780 | 2.177094 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0433800 | RBH | 0.5650425 | 1.825241 | 1.362653 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0025290 | RBH | 0.047049 | 0.130327 | 0.089696 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0416500 | RBH | 0.6242935 | 0.933284 | 4.3692095 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0025690 | RBH | 0.0 | 0.110063 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0025700 | RBH | 0.0 | 2.046933 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0025360 | RBH | 0.0 | 2.859706 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0025960 | RBH | 0.0 | 0.249250 | 0.000000 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0025610 | RBH | 0.0 | 0.410390 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G025450 | RBH | 0.0 | 0.705228 | 0.642107 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0025520 | RBH | 0.0 | 1.919036 | 0.666668 |