Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_06g0023120 | OGI:06071770 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr06:25457068-25458539 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | AAGTTTTCTCGTCACTTGTTTCTTGTTAGTAGCACAACCAATACCATAACTACTTTACATTTTTTTAACTCAACAAAATCTACCTGCTAATGCTAAACTAAACAGCCTGACTAATCATTCAGGAGCAACTAACTGAGCATAAGCAAGAGCATTGCCACTACGACACAGGAACCGATCCTCATCGGCGGCGGCGCCGCCGCCGCCGCCGGCTTCTCCGCCGATGCCAAGGGAACCGGCATAACCACAGGGCGCCGCGTCACGGGAGCAGCCTGGGTGGCGTTGCACGACGGAACACCTGCGATGCGAGGGCGAGGCGCTCCGGCGAGGAACTCCGGCGAGATGCACACGGCGCGGTTGCCGTGAAGCCGGACCCTGCCCGCCATCTTCGCCAGCGCCGGCGGCACCTCGCCCTCCAGCAGGTTGCCGTCCAGCCCCAGGTAGGTGACGTTGCGCAGCGACTCCCCCAGCGACGCCGGGATCGTGCCCGTGAGGCCGGCGTCGGAGAGGCCCACGGCGGAGATGCCCTTCAGGCCGGCGAACATGTCGGCCGGCACGCTCCCGCCGAGGCGACGGTTGCCGCTGAGGTACATCTCCCTGATCGCCGTCATGCCGCGGAGCGCGGCCGGCACGCCGCCGGTGAGCCGGTTGTTGGAGAGGTCGAGCAGCTCGAGCGACGCGAGCCCGCCGAGCTCTCCTGGGATCGGGCCGGCCAGCGTGTTGGAGGAGAGGTCGAGCTTGACGAGCTGCGTGAGGCCGCCGATTGCGCGGGGGATGCCGCCGGCGAGGAGGTTGGAGCTCAGGTCGAGGATCTTGACGTTGGCGAGTCCCTGGACGAGCGCGCTCGGGATGCGGCCGGCGAAGCGGCTGCCGGAGAGGACGAGCTGCTCGAGGCGCGGGAAGGGCGTGGACGGGAGGTCGCCGGACAGGCCGGAGTAGGCTACGACGAGGCGGCGGAGGAGCGGGAGGCTGGCGGCGGAGATGGCGAGGCGGCCGGTGAGCGCGGGGTTGTTGACGAGCACGAGGTCCTGGAGCGTGGGAGGGAGCCGCCACGGGAGCGGCGGGAGAGGCCGCGCGTCGTCGTCGCCGACGAAGCAGCCGTAGACGAAGAGGCTGCGGAGGCGCGGGAAGGAGGCGGCGAGGAGGCCGGAGGTGAGGAGCGTGGCGGCGGAGGGCGCCGCACAGCTCGGATTGGCGGAGAAGTCGGAGACGTAGCCGAGCGAGATGCCGACGACGTGGGACGCGTTCCCGCCGTCGTCGTCGTCGCACGACACGCCGTGCGGGCCGGCGAGGCAGAGGTCGTCGGGGAAGCTGGCGCGCCAGGGGAAGCCCGGGTTGACTGCCTCGAGCACCGCGTACACGCCCTCCTGCTCCGCCGCCGGCAGACGCGGCTCGCTCTCCGCCGCCGCCGCCGCCGCGGCGAGAACGGCCACAACGAGGAGGCGACCAAGAATCATTCTCATGGCAAAATGGAC
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| CDS seq | ATGAGAATGATTCTTGGTCGCCTCCTCGTTGTGGCCGTTCTCGCCGCGGCGGCGGCGGCGGCGGAGAGCGAGCCGCGTCTGCCGGCGGCGGAGCAGGAGGGCGTGTACGCGGTGCTCGAGGCAGTCAACCCGGGCTTCCCCTGGCGCGCCAGCTTCCCCGACGACCTCTGCCTCGCCGGCCCGCACGGCGTGTCGTGCGACGACGACGACGGCGGGAACGCGTCCCACGTCGTCGGCATCTCGCTCGGCTACGTCTCCGACTTCTCCGCCAATCCGAGCTGTGCGGCGCCCTCCGCCGCCACGCTCCTCACCTCCGGCCTCCTCGCCGCCTCCTTCCCGCGCCTCCGCAGCCTCTTCGTCTACGGCTGCTTCGTCGGCGACGACGACGCGCGGCCTCTCCCGCCGCTCCCGTGGCGGCTCCCTCCCACGCTCCAGGACCTCGTGCTCGTCAACAACCCCGCGCTCACCGGCCGCCTCGCCATCTCCGCCGCCAGCCTCCCGCTCCTCCGCCGCCTCGTCGTAGCCTACTCCGGCCTGTCCGGCGACCTCCCGTCCACGCCCTTCCCGCGCCTCGAGCAGCTCGTCCTCTCCGGCAGCCGCTTCGCCGGCCGCATCCCGAGCGCGCTCGTCCAGGGACTCGCCAACGTCAAGATCCTCGACCTGAGCTCCAACCTCCTCGCCGGCGGCATCCCCCGCGCAATCGGCGGCCTCACGCAGCTCGTCAAGCTCGACCTCTCCTCCAACACGCTGGCCGGCCCGATCCCAGGAGAGCTCGGCGGGCTCGCGTCGCTCGAGCTGCTCGACCTCTCCAACAACCGGCTCACCGGCGGCGTGCCGGCCGCGCTCCGCGGCATGACGGCGATCAGGGAGATGTACCTCAGCGGCAACCGTCGCCTCGGCGGGAGCGTGCCGGCCGACATGTTCGCCGGCCTGAAGGGCATCTCCGCCGTGGGCCTCTCCGACGCCGGCCTCACGGGCACGATCCCGGCGTCGCTGGGGGAGTCGCTGCGCAACGTCACCTACCTGGGGCTGGACGGCAACCTGCTGGAGGGCGAGGTGCCGCCGGCGCTGGCGAAGATGGCGGGCAGGGTCCGGCTTCACGGCAACCGCGCCGTGTGCATCTCGCCGGAGTTCCTCGCCGGAGCGCCTCGCCCTCGCATCGCAGGTGTTCCGTCGTGCAACGCCACCCAGGCTGCTCCCGTGACGCGGCGCCCTGTGGTTATGCCGGTTCCCTTGGCATCGGCGGAGAAGCCGGCGGCGGCGGCGGCGCCGCCGCCGATGAGGATCGGTTCCTGTGTCGTAGTGGCAATGCTCTTGCTTATGCTCAGTTAG
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| Protein seq | MRMILGRLLVVAVLAAAAAAAESEPRLPAAEQEGVYAVLEAVNPGFPWRASFPDDLCLAGPHGVSCDDDDGGNASHVVGISLGYVSDFSANPSCAAPSAATLLTSGLLAASFPRLRSLFVYGCFVGDDDARPLPPLPWRLPPTLQDLVLVNNPALTGRLAISAASLPLLRRLVVAYSGLSGDLPSTPFPRLEQLVLSGSRFAGRIPSALVQGLANVKILDLSSNLLAGGIPRAIGGLTQLVKLDLSSNTLAGPIPGELGGLASLELLDLSNNRLTGGVPAALRGMTAIREMYLSGNRRLGGSVPADMFAGLKGISAVGLSDAGLTGTIPASLGESLRNVTYLGLDGNLLEGEVPPALAKMAGRVRLHGNRAVCISPEFLAGAPRPRIAGVPSCNATQAAPVTRRPVVMPVPLASAEKPAAAAAPPPMRIGSCVVVAMLLLMLS |
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| Function | Protein TOO MANY MOUTHS [UniProtKB/Swiss-Prot:Q9SSD1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_06g0023120 | OsAzu_06g0023120.01 | Chr06 | 25457068 | 25458539 | - | NAM | ||
| CDS seq | ATGAGAATGATTCTTGGTCGCCTCCTCGTTGTGGCCGTTCTCGCCGCGGCGGCGGCGGCGGCGGAGAGCGAGCCGCGTCTGCCGGCGGCGGAGCAGGAGGGCGTGTACGCGGTGCTCGAGGCAGTCAACCCGGGCTTCCCCTGGCGCGCCAGCTTCCCCGACGACCTCTGCCTCGCCGGCCCGCACGGCGTGTCGTGCGACGACGACGACGGCGGGAACGCGTCCCACGTCGTCGGCATCTCGCTCGGCTACGTCTCCGACTTCTCCGCCAATCCGAGCTGTGCGGCGCCCTCCGCCGCCACGCTCCTCACCTCCGGCCTCCTCGCCGCCTCCTTCCCGCGCCTCCGCAGCCTCTTCGTCTACGGCTGCTTCGTCGGCGACGACGACGCGCGGCCTCTCCCGCCGCTCCCGTGGCGGCTCCCTCCCACGCTCCAGGACCTCGTGCTCGTCAACAACCCCGCGCTCACCGGCCGCCTCGCCATCTCCGCCGCCAGCCTCCCGCTCCTCCGCCGCCTCGTCGTAGCCTACTCCGGCCTGTCCGGCGACCTCCCGTCCACGCCCTTCCCGCGCCTCGAGCAGCTCGTCCTCTCCGGCAGCCGCTTCGCCGGCCGCATCCCGAGCGCGCTCGTCCAGGGACTCGCCAACGTCAAGATCCTCGACCTGAGCTCCAACCTCCTCGCCGGCGGCATCCCCCGCGCAATCGGCGGCCTCACGCAGCTCGTCAAGCTCGACCTCTCCTCCAACACGCTGGCCGGCCCGATCCCAGGAGAGCTCGGCGGGCTCGCGTCGCTCGAGCTGCTCGACCTCTCCAACAACCGGCTCACCGGCGGCGTGCCGGCCGCGCTCCGCGGCATGACGGCGATCAGGGAGATGTACCTCAGCGGCAACCGTCGCCTCGGCGGGAGCGTGCCGGCCGACATGTTCGCCGGCCTGAAGGGCATCTCCGCCGTGGGCCTCTCCGACGCCGGCCTCACGGGCACGATCCCGGCGTCGCTGGGGGAGTCGCTGCGCAACGTCACCTACCTGGGGCTGGACGGCAACCTGCTGGAGGGCGAGGTGCCGCCGGCGCTGGCGAAGATGGCGGGCAGGGTCCGGCTTCACGGCAACCGCGCCGTGTGCATCTCGCCGGAGTTCCTCGCCGGAGCGCCTCGCCCTCGCATCGCAGGTGTTCCGTCGTGCAACGCCACCCAGGCTGCTCCCGTGACGCGGCGCCCTGTGGTTATGCCGGTTCCCTTGGCATCGGCGGAGAAGCCGGCGGCGGCGGCGGCGCCGCCGCCGATGAGGATCGGTTCCTGTGTCGTAGTGGCAATGCTCTTGCTTATGCTCAGTTAG
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| Protein seq | MRMILGRLLVVAVLAAAAAAAESEPRLPAAEQEGVYAVLEAVNPGFPWRASFPDDLCLAGPHGVSCDDDDGGNASHVVGISLGYVSDFSANPSCAAPSAATLLTSGLLAASFPRLRSLFVYGCFVGDDDARPLPPLPWRLPPTLQDLVLVNNPALTGRLAISAASLPLLRRLVVAYSGLSGDLPSTPFPRLEQLVLSGSRFAGRIPSALVQGLANVKILDLSSNLLAGGIPRAIGGLTQLVKLDLSSNTLAGPIPGELGGLASLELLDLSNNRLTGGVPAALRGMTAIREMYLSGNRRLGGSVPADMFAGLKGISAVGLSDAGLTGTIPASLGESLRNVTYLGLDGNLLEGEVPPALAKMAGRVRLHGNRAVCISPEFLAGAPRPRIAGVPSCNATQAAPVTRRPVVMPVPLASAEKPAAAAAPPPMRIGSCVVVAMLLLMLS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.430847 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0627500 | RBH | 0.0 | 0.0 | 0.762242 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g42220 | RBH | 0.0 | 0.0 | 0.194487 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0627500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0004310 | SBH | 0.053326 | 2.659473 | 0.663938 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0022940 | RBH | 0.0 | 0.0 | 0.216740 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0023040 | RBH | 0.0 | 0.0 | 0.224898 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0022710 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0023130 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0398800 | RBH | 0.082531 | 0.057078 | 0.2357095 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0022600 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0378700 | RBH | 0.03922 | 0 | 0.393243 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0023070 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0023000 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0022640 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0023390 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0022950 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G022670 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0022920 | RBH | 0.0 | 0.0 | 0.0 |
