Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_06g0001570 | OGI:01056340 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr06:1370284-1370533 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TTATAGATCTCTTTTTAGTAGAAGTAATTCTTTCTTGCAAAGAACCCATTTCTGTACTAAGAGTAGGTTGATAACCCACTGCAGAGGGCATTCTCCCTAATAAGGCAGATACCTCCGATCCTGCTTGAACAAAACGAAAGATATTATCGATGAATAGAAGCACGTCTTGCTTATTAACATCTCGGAAATATTCTGCCATAGTTAGGGCAGTCAAACCAACTCTCATACGAGCTCCTGGCGGTTCATTCAT |
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| CDS seq | ATGAATGAACCGCCAGGAGCTCGTATGAGAGTTGGTTTGACTGCCCTAACTATGGCAGAATATTTCCGAGATGTTAATAAGCAAGACGTGCTTCTATTCATCGATAATATCTTTCGTTTTGTTCAAGCAGGATCGGAGGGAGAATGCCCTCTGCAGTGGGTTATCAACCTACTCTTAGTACAGAAATGGGTTCTTTGCAAGAAAGAATTACTTCTACTAAAAAGAGATCTATAA |
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| Protein seq | MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEGECPLQWVINLLLVQKWVLCKKELLLLKRDL |
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| Function | ATP synthase subunit beta, chloroplastic (Fragment) [UniProtKB/Swiss-Prot:O03063] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_06g0001570 | OsAzu_06g0001570.01 | Chr06 | 1370284 | 1370533 | - | NAM | ||
| CDS seq | ATGAATGAACCGCCAGGAGCTCGTATGAGAGTTGGTTTGACTGCCCTAACTATGGCAGAATATTTCCGAGATGTTAATAAGCAAGACGTGCTTCTATTCATCGATAATATCTTTCGTTTTGTTCAAGCAGGATCGGAGGGAGAATGCCCTCTGCAGTGGGTTATCAACCTACTCTTAGTACAGAAATGGGTTCTTTGCAAGAAAGAATTACTTCTACTAAAAAGAGATCTATAA
More
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| Protein seq | MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEGECPLQWVINLLLVQKWVLCKKELLLLKRDL |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 16.246969 | 0.0 | 24.659756 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0036440 | SBH | 195.072189 | 54.160545 | 311.076752 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0001460 | RBH | 184.577347 | 9.882667 | 86.070229 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0019500 | RBH | 85.8620225 | 5.305676 | 7.5884395 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0001500 | RBH | 103.812248 | 1.650233 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0009810 | RBH | 3.840627 | 0.0 | 1.804389 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G001360 | RBH | 73.330353 | 36.706539 | 135.233261 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0001500 | RBH | 45.919033 | 19.697384 | 146.525360 |
