Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsAzu_04g0027660 OGI:04094390 | 14/16 Azucena | AzucenaRS1 | Gramene(+IsoSeq) Chr04:30721028-30723615
Gene Symbol -
DNA seq

AGGAATTCTCGATCGTTCTCTGCTAGTAGGAAATCGAGCCGACTGACCAGCGATGTCGGCGGTTGAGAGGAAGACGGCGTGCGTCACCGGCGGCAACGGGTACATCGCTTCGGCGCTCATCAAGATGCTGCTGCAGAAGGGATGTGCTGTCAACACGACAGTCAGAAACCCCGGTGAGATTCTTCTTCTTCAGTTCATAATTTCGTGCATACTCGTGCATAGATTTGCAGTAGCATCAGTGGTTTTAACCTCGTTTTTCTTTTCTTTTTTTTTTAAAAAAAAGGAATTTGGTTTTAGCCTCTGAAACTGCTGCTACACATTGCAATTTTGAGTCGCAGAAAACATGGAGAAGAACTCCCACTTCAAGGACTTGCACGCACTTGGTCCCCTGGCGGTCTTCCGCGCCGACTTGGAGGAGGAAGGCAGCTTCGACGAGGCGGTCGCCGGCTGTGATTACGCCTTCCTCGTCGCTGCTCCGGTGAACCTCAAGTCAGAGAACCCTCAGGTATTACATAGCCGTCTACAACAATTTGATTAAGTTTATAGAAAATTTAATAATATTTATAACATCAAATTAGTTTCATTAAAAATAACTTTGAATGTATTTAGATGGTATGTTTGTTATATGTGAGAAATGTTCTGTATTTTTTTTATGAACTTATCATAATAAAACATAATTAGAAAAGAGTTAAATCATCTTATAGTATAAAACAGAGGAAGGGGAAACATATTTTAAGATTATCTTTATGGATTTAGCTAGATGGTGGTTGCCACTCCTCAAGTCTCTTATGGTTGCCAGGCCATTAATGATACTAAGTATTCCTCCATAAAAATGTCTCTTTGCACTTCACTCTTCATTGTTGGCTTATGCTTACATTTACAAGCTAACATTTAAAATTTAGAACTTAATTTTAAGTTTGATCTTTTTCTCATCATAGTTTATTTTTATTTACTAATAAGCGATTTAAATAAGCGAAACAATGCTACTTTCTGTTGCGATGACACAGACACATACACAGAATCACATACACGCACTCCTTCTGTCTCATAGAAACCAATCTAGTACTGGATGTGACATATCCTAATACTATGAATCTGAATATATCTCTATCCATATTCGTTATACTAAATGTATCATAATCAGTTATAGATTTTTTTTTTTTACGAAGGGAGTAGTTTTGTTTTTTACTTGGTCAGCCTGATGGTAATGACAGAAAGAACTGGTGGAAGCCGGTGTACGAGGCACTCTGAACGTGATGAGGTCGTGCGTGAGAGCCGGCACGGTGAGGCGCGTGGTCCTCACATCGTCGGCGGCCGCCGTCTCCGGCAGGCCGCTGCAAGGCGACGGCCATGTCCTCGACGAGTCGTCATGGTCCGACGTCGACTACCTCAGCTCACCAGCCAACAAGACATCTCCCGGAAAGGTACACACAAAATTACAGATTTTATTTAACACAGGTCAGTCAATCAGAGGCTCAGAGCCCATTAAATCGGCCACATGAGAACAGCTCCGTGTGCTGATGCAATCAGCGTTTACAATTTCGGTTCGAAATTTCCGGCAAGCATTTACTTCATCCAAATATTTCATATTTTTTTTAATTTAGAAAAAAATATTTAAATTCGGTCAAGATTTGTTTAAATTTCAAACTTTTTTGGGTCCCTGATAGATTTGTGCATATCGAAAATATTAAGACATGGATGCAATGCAGGCGTACTCGCTTTCGAAGGTTCTTTCAGAGAAGGAAGCGAGCAGGGTCGCGGAGGAGAACGGCATCAGCCTGGTGACCGTTTGCCCGGTGGTCACCGTTGGCCCGGCGCCGGCAGCGGAGGCCAAACCGTGCGTCGCCGCCGTCCTCTCCTTGCTCTCCGGTGATAACTAATCGAATCAAGAACCGGCCGGTCCATGGCAAATGCGGCAACGAAAAGCAATTCCTGTGAAATTTATTTGTTCATCTCTTGATTTTCTTTCAGGCGACCAGGAGATGATCAGCACCGTGAAGCTCATGGAGAAGGCCACCGGCGGGCTAATGCTGGTCCACGTCGACGACCTCTGCCGCGCCGAGATATTCCTCGCCGAGAAGCCGCCGGCGGCGGCGGCGGCGGCGGCGGCGGAGAGGTACATCTGCTGCGGCCTCAGCGCCACCATGCTGCAGCTCGCCCGCTTCCTGGCGGCCAAATACCCGGAGTACAATGTCGACGTCGCCGCGTAAGATCGAGCTGATCTCACTGAGTAATAATTCCCCATGCGTCTCCATGATCTTATCGAGAGCTCTGACGATGGTGAACTTTCATGCAGCCTCGGCGACCTCCCGGAGAAGCCGAGGATCCGCCTCTCGTCGGAGAAGCTCGCCGGAGAAGGGTTCGAGTTCAAGAACAGGACGCTGGACGAGATGTACGATGATGCCTTCTTGGAGTACGGTAGAGCCCTCGGGATTCTGCCATACTGATAACGATGTTGTTCCCCTCGTATATCATCTGTTTCTCTGGTGGTGATCACAACGAAAGGATGCAAATCTTAGCGTACATTACCACCGGTAGCAGCAACAGCGAGAACAGTTTCAAGTTCAAAAATTAATTGTATGAGATGC

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CDS seq

ATGTCGGCGGTTGAGAGGAAGACGGCGTGCGTCACCGGCGGCAACGGGTACATCGCTTCGGCGCTCATCAAGATGCTGCTGCAGAAGGGATGTGCTGTCAACACGACAGTCAGAAACCCCGCCGGCACGGTGAGGCGCGTGGTCCTCACATCGTCGGCGGCCGCCGTCTCCGGCAGGCCGCTGCAAGGCGACGGCCATGTCCTCGACGAGTCGTCATGGTCCGACGTCGACTACCTCAGCTCACCAGCCAACAAGACATCTCCCGGAAAGGCGTACTCGCTTTCGAAGGTTCTTTCAGAGAAGGAAGCGAGCAGGGTCGCGGAGGAGAACGGCATCAGCCTGGTGACCGTTTGCCCGGTGGTCACCGTTGGCCCGGCGCCGGCAGCGGAGGCCAAACCGTGCGTCGCCGCCGTCCTCTCCTTGCTCTCCGGCGACCAGGAGATGATCAGCACCGTGAAGCTCATGGAGAAGGCCACCGGCGGGCTAATGCTGGTCCACGTCGACGACCTCTGCCGCGCCGAGATATTCCTCGCCGAGAAGCCGCCGGCGGCGGCGGCGGCGGCGGCGGCGGAGAGGTACATCTGCTGCGGCCTCAGCGCCACCATGCTGCAGCTCGCCCGCTTCCTGGCGGCCAAATACCCGGAGTACAATGTCGACGTCGCCGCCCTCGGCGACCTCCCGGAGAAGCCGAGGATCCGCCTCTCGTCGGAGAAGCTCGCCGGAGAAGGGTTCGAGTTCAAGAACAGGACGCTGGACGAGATGTACGATGATGCCTTCTTGGAGTACGGTAGAGCCCTCGGGATTCTGCCATACTGA

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Protein seq

MSAVERKTACVTGGNGYIASALIKMLLQKGCAVNTTVRNPAGTVRRVVLTSSAAAVSGRPLQGDGHVLDESSWSDVDYLSSPANKTSPGKAYSLSKVLSEKEASRVAEENGISLVTVCPVVTVGPAPAAEAKPCVAAVLSLLSGDQEMISTVKLMEKATGGLMLVHVDDLCRAEIFLAEKPPAAAAAAAAERYICCGLSATMLQLARFLAAKYPEYNVDVAALGDLPEKPRIRLSSEKLAGEGFEFKNRTLDEMYDDAFLEYGRALGILPY

Function Anthocyanidin reductase ((2S)-flavan-3-ol-forming) [UniProtKB/Swiss-Prot:Q5FB34]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsAzu_04g0027660 OsAzu_04g0027660.01 Chr04 30721080 30723521 + NAM
CDS seq

ATGTCGGCGGTTGAGAGGAAGACGGCGTGCGTCACCGGCGGCAACGGGTACATCGCTTCGGCGCTCATCAAGATGCTGCTGCAGAAGGGATGTGCTGTCAACACGACAGTCAGAAACCCCGCCGGCACGGTGAGGCGCGTGGTCCTCACATCGTCGGCGGCCGCCGTCTCCGGCAGGCCGCTGCAAGGCGACGGCCATGTCCTCGACGAGTCGTCATGGTCCGACGTCGACTACCTCAGCTCACCAGCCAACAAGACATCTCCCGGAAAGGCGTACTCGCTTTCGAAGGTTCTTTCAGAGAAGGAAGCGAGCAGGGTCGCGGAGGAGAACGGCATCAGCCTGGTGACCGTTTGCCCGGTGGTCACCGTTGGCCCGGCGCCGGCAGCGGAGGCCAAACCGTGCGTCGCCGCCGTCCTCTCCTTGCTCTCCGGCGACCAGGAGATGATCAGCACCGTGAAGCTCATGGAGAAGGCCACCGGCGGGCTAATGCTGGTCCACGTCGACGACCTCTGCCGCGCCGAGATATTCCTCGCCGAGAAGCCGCCGGCGGCGGCGGCGGCGGCGGCGGCGGAGAGGTACATCTGCTGCGGCCTCAGCGCCACCATGCTGCAGCTCGCCCGCTTCCTGGCGGCCAAATACCCGGAGTACAATGTCGACGTCGCCGCCCTCGGCGACCTCCCGGAGAAGCCGAGGATCCGCCTCTCGTCGGAGAAGCTCGCCGGAGAAGGGTTCGAGTTCAAGAACAGGACGCTGGACGAGATGTACGATGATGCCTTCTTGGAGTACGGTAGAGCCCTCGGGATTCTGCCATACTGA

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Protein seq

MSAVERKTACVTGGNGYIASALIKMLLQKGCAVNTTVRNPAGTVRRVVLTSSAAAVSGRPLQGDGHVLDESSWSDVDYLSSPANKTSPGKAYSLSKVLSEKEASRVAEENGISLVTVCPVVTVGPAPAAEAKPCVAAVLSLLSGDQEMISTVKLMEKATGGLMLVHVDDLCRAEIFLAEKPPAAAAAAAAERYICCGLSATMLQLARFLAAKYPEYNVDVAALGDLPEKPRIRLSSEKLAGEGFEFKNRTLDEMYDDAFLEYGRALGILPY

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Gene Transcript Chromosome Start End Strand Source
OsAzu_04g0027660 OsAzu_04g0027660.02 Chr04 30721028 30723615 + IsoSeq
CDS seq

ATGTCGACGTCGCCGCCCTCGGCGACCTCCCGGAGAAGCCGAGGATCCGCCTCTCGTCGGAGAAGCTCGCCGGAGAAGGGTTCGAGTTCAAGAACAGGACGCTGGACGAGATGTACGATGATGCCTTCTTGGAGTACGGTAGAGCCCTCGGGATTCTGCCATACTGATAACGATGTTGTTCCCCTCGTATATCATCTGTTTCTCTGG

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Protein seq

MSTSPPSATSRRSRGSASRRRSSPEKGSSSRTGRWTRCTMMPSWSTVEPSGFCHTDNDVVPLVYHLFLW

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.000000 0.0 4.425840

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_04g0630300 SBH 0.0 0.0 0.000000
Nipponbare | IRGSP 1.0 | MSU LOC_Os04g53780 RBH 0.000000 0.0 0.179051
Nipponbare | IRGSP 1.0 | RAP-db Os04g0630300 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) NA NA NA NA NA
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_04g0028450 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_04g0028160 RBH 0.0 0.0 2.185503
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_04g0027940 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_04g0028180 RBH 0.0 0.0 1.745683
Minghui 63 | MH63RS3 | HZAU OsMH63_04G0505900 RBH 0.047325 0.092768 0.460921
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_04g0026880 RBH 0.0 0.0 0.663762
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_04G0509500 SBH 4.8475155 0.251505 19.1165945
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_04g0027310 SBH 0.0 0.064770 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_04g0027110 SBH 0.509814 4.906676 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_04g0027150 RBH 0.000000 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_04g0027700 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_04g0027790 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_04G027080 RBH 0.0 0.0 0.571099
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_04g0027010 SBH 0.0 0.0 2.627548
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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