Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsAzu_04g0018010 OGI:04074280 | 16/16 Azucena | AzucenaRS1 | Gramene(+IsoSeq) Chr04:23042340-23046733
Gene Symbol -
DNA seq

AGCCATCCCCAAACTGCAGCAGCTAGCTATCGCCAAACCCTAGCTATCCCCAAATCGTATCGACGGGCGACGGCGGCGGCGGCGACGGCGGCGGCGGCGGCGGCGGCGAGGTGGCTAGGGCAACGGCAAGGGCTCACGTGGTGGTGGCGGCGGTGGCTTCGGTTCCCGTGGCGGCTGCTGCTGCTGCGCGAGGTGGTGGCGGCGGCGGTGGCTGCGGTTCCCGTGGCGGCGGCTGCTGCTGCTTGAGGAGGTGGCGGCGGCGGTTGCTTCTGCTGCTTGAGGTTGTGGCGGCGGCTACGGCTGCAGCTGCTGCTTGAGGTGGCGGCGGCGGCTGGTGCAGACTGAGGCGGCGGCTATGGCTGCTGCTGTTGCTTGAGGCAGCGGCGGCGGCGGCTGGTGCTGATTGAGGCGGCGGCGGCAGCTACTGCGGCTTGAGGTGGTGGCTGCGGCAGCCACGGCGGCTGCTGCTGCTACTCCTCAAAGCTGTGGCGCCCGCGCGGACGGCTACTGCGGCTCCCGCGGCAGCTCCCGCGGTGGCGGCTACTGCTGCGGCTTGAGGTGGTGGCTGCGACCAAGACAACAGCGAAAGATGAAGGCTCAAGCAAGCAAATCGCCTCCCCAATCTTGGGTGCCTGAAGGGTATGTGTCCATTTTCCCCTTCCCGTTTGGCAATGATTTTTGTTGCATACATGGTAGGATGCACTTATTTTTTTGGCATGCATTTTGGATAGGATGGATCCTGGTAAAGCATATCTGTTGAAAATCAGGCTCCATGGGCACCAAAGTAGAGAAAACTTTACATTTAGAACAGAGGAAGTGATAGATAGCGACAGAACAAACTTCAAGGATTTTATTGATCACATTAGAGAGAAGTACCCATGGGGGGTGAATGAATTTGTAACAATGAACTATTTTGATCCAGTAAACAGAAACTACCCTCAAGTATGCTCAGACCAGTCAATGCTAGAAATGTTTGACAAGAATATGACTAGCAAGGAAATATCTATGTTGATTCAAATTCATAAGAACAATGAGCAAGCTGTAGTTCTGCCACTTGCTGATTGGCCAACACCTAAAAAGGTAGTTAGTGGGGCAGAACCTAATGCAGTTAATATACATGAGGTGCCATGTACTCCATCTCTTGCAATGCCATCTCAGGCTACTATATCTCAGCCTAGCAGCAGCACACAACCAGTTGTTGATATGTACTTGGAAAATTTATTTGAACAAAATGAACATGTCGGTGTTGACGATGAGGATATGTATTCAGATGATGAAATTGTTGTGGCTGTCACTAATGCTGGGCAAGAGAAAGAGCCTACTGATGTGCCTAAGGTGGACAGTGAGGAAAGGGATGAGGTTGAGGTTGAGGTAGAGGAGGGGGGGAGGAGGAGGGGGAGGAGGAGGAAGGGGATGAGGAGTGGGTGGAGGAGGGGGAGGAGGAGGAGGAAGGGGAGGAGGAGTGGGTGGGCGAAGATGCTATTCCTGTTAAAGATCCAGAGGTGGCATATGATAGTAATGATCCACCGATGACAGAAAATAGTGTGTATGAAAACATTGTGCAATTCAGATTGGCAATAGCTCAGCATGCTATTAAACATGAATTCGAGTATAACATTGTTAAGACTGACCCAGGGAGGTTCATTGCCAAGTGTGCTGCTGAGGGATGTGGGTGGAGAATTCATGCCTCAACTATGCAAGACGGTGTTACAATGCAGGTTATAACTTAATTTCTATTGTTTTTTCAACAGGTTTCATAGTTTTGCAGTTGCTAATGAAACAATGTTTTTGTTCCTTTGTTGTTTTGACAGGTGAAGACCAATAGTGTGCCTCACTCTTGTTCAAGTGCAAGAAGAAGTGAAAAGATTAAACCTGCAAGTAAGGCTTGGATATGTGAAAAGGTTAAGGATTGGTTGTTAGAGGATGCAACCGTGGGAGCAAAAGAATTGCAAAGAAGGATCCTTGAAACTCACAAAGTTCTGATTAACTACAAGAGGGTATATGCTGGGAAGGAATTGGCTCTTGAAAAGTTGTATGGTAAATGGGAGGACAGTTTTGACAAATTGTACAGTTACAAGGCAATAATTGAAAGAGAATGCCCTGGAAGCCTTGTTGTAATTGATCACCACACAGTGCTGAATAAGTTGAGATTCAGAAGACTATTCTTTACACTAAAACCTTGCATAGATGGTTTTCGAGATGGTTGCAGGCCATATGTAGCAATAGATAGCACTTTTTTGACCGGCAAGTTCAAGGGACAGCTAGCAACTGCTTGTGCTGTTGATGGGCATAACTGGATGTACCCAGTAGCCTTTGGAGTGATGGACTCAGAGACCAATGAAAACTACAAATGGTTCATGGAAAGACTTTAGGGATGCTATTGGTAATCCAGAAGGTCTCACAATTTGTACAGATGCAGGGAAAGGAGTAGATACTGCAGTACATAACATTTTTCGTGATGTAGAACATAGAGAATGCATGCTACATTTGGTGAATAATTTCAAAAAGAGGTTTCATGGAAAGGTGTTTGATGATAACCTCTGGCCTGCAGCATACTCATATAATCCATATTTTTTCCAGAAGCACATTGAGAAAATGGATGAAGCAAAGCCAGAGGCTATGGCTTATTTAAGGAAAAACCATGTTAGGCTTTGGACTAGAAGCCAATTCTCTGGGCAATGCAAGGTTGATTATGTTACAAATAATTTGGCTGAATGTTTCAATAGCTGGATCAGGCCACATAAAGGATTGCACTTGGTGGATTTCATGGACAAGATTAGGCACAAGTTAATGGTGAAGTGGAACAGGAGAAGATCAATTTCAAAAAAGCTAGAAGGGAATATACTACCACACATTATGAATGAATTGAATGAAAAGAGCAGGGGTTTGAACCATGAGGTTACAAGAAGTGATGATGCATTAGCAGAGGTGGAGTGCAAGGGAGGAAGTGGCCACAGGTTAGTTTTTTTTTATGTTCATTGCAACTTAATTGCCAAGTTTGTGCACTTCCTAAGTATACCATGTTTGTTCTTTTGTTCTGGTGGTAGGTTTGTTGTCAATCTTACAGATAGGACATGTAGCTGTAGAGAGTGGCAGGTTTCAGGCAAACCATGCACACATGCTATAGCTTTTATCACATCCATCCGAGGCTGCAAACTTGAGAATTTTGTAGATGAGTGCTACTCTGTTAGTAGGTTCCAAATGGCTTATTCAAAAGTAATCCCTCCTTTGGTTGACAAATCTCAATGGCCCAATCCTACCCATGACTTCTTGCATCCACCGGTTCTAAAAAGGTAGCAGGCAGGCCAAAAAGGACAAGATATAGAGGTTGTAGTGAAAAGGGCAACCCAGGAGGAGTTAACAAGGGCAAGCATTAGTGCCCGTTGTGTAAGGGTTATGGTCATCATTGGCATAGTTGCAGAGAGGGTGATCCTGCTGATTACCAAGCAATGCTAGCTGAAAGGTAACCTTTTTAATTGATAATAATGTGATATATTTTATGTTTACCCTCATTGTAAATTCTGTTATACAACCTACTACTCGTTTGCAGGGGACCTCCAAAAAAAAGGCAAAAGTCTAGTAATGCACATGCTGAAACTAGCATTGTACATGTTCCTAGTGCATCTTCTGCTCAAAATGCAATATTGTCTGCAACAATGACATATCCACCAAGCAAAAGTTGTCAAACCGGGAAAAAAGGACAGGACCTCAGTAATACTTCATCAGGGTCAGTTAGGTATATTAGTTCCATCTACCATTGCAATAATGACTTCCTCATATGCTTACATTTTCCTTTACCATTTATGTCAATGTCAGATCAAGGTCAGTGACAGGATCCAACCAACCTGAACCTTTGAGTGTGTTGATGCCACTAGCAGCGCCTGGAGAGAACTCTAAGGCCAAGGCTAAGACAGACCAAAACTAAAGCCAAGATAGCTCCTAGGAAGAATACAAAGGATAGCGCTGCTACTACGCCTTTGGCACAAGTCAAACAAAAAGGCAACTTCATTCCTGTGTCTCCTGATAGTCCAGCCATGAGTACAAGGAGCAAAAAGAAATCTCTAAATTTTAATTAGGGATCCTTTTTAATTAACATGTGCTCACATATTTTGGTACTGTGATCTCTGGTTGCACGGTACTTATGTAGTACTCCAGTTAATCTAGCGTTTTGGTACTATGGTGCTGATGCATTTTAGTCATGTATATGGTGATGGTACTGTATGTGGTGAGATGGCACTTCTATGGCACTGCAAGACATGCATATGTGATGGTACTGTATGTGGCACTTAATGATAGTGATGCATTTTGGGGTTGTATGCAAATCTGTGATGAGAGATGATGCACTGTATGTGCTGATTTCAACATTTATGTCATGACCATGTTATTTCAGCTGT

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CDS seq

ATGGATCCTGGTAAAGCATATCTGTTGAAAATCAGGCTCCATGGGCACCAAAGTAGAGAAAACTTTACATTTAGAACAGAGGAAGTGATAGATAGCGACAGAACAAACTTCAAGGATTTTATTGATCACATTAGAGAGAAGTACCCATGGGGGGTGAATGAATTTGTAACAATGAACTATTTTGATCCAGTAAACAGAAACTACCCTCAAGTATGCTCAGACCAGTCAATGCTAGAAATGTTTGACAAGAATATGACTAGCAAGGAAATATCTATGTTGATTCAAATTCATAAGAACAATGAGCAAGCTGTAGTTCTGCCACTTGCTGATTGGCCAACACCTAAAAAGGTAGTTAGTGGGGCAGAACCTAATGCAGTTAATATACATGAGGTGCCATGTACTCCATCTCTTGCAATGCCATCTCAGGCTACTATATCTCAGCCTAGCAGCAGCACACAACCAGTTGTTGATATGTACTTGGAAAATTTATTTGAACAAAATGAACATGTCGGTGTTGACGATGAGGATATGTATTCAGATGATGAAATTGTTGTGGCTGTCACTAATGCTGGGCAAGAGAAAGAGCCTACTGATGTGCCTAAGGTGGACAGTGAGGAAAGGGATGAGGTTGAGGTTGAGGTAGAGGAGGGGGGGAGGAGGAGGGGGAGGAGGAGGAAGGGGATGAGGAGATCCAACCAACCTGAACCTTTGAGTGTGTTGATGCCACTAGCAGCGCCTGGAGAGAACTCTAAGGCCAAGGCTAAGACAGACCAAAACTAA

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Protein seq

MDPGKAYLLKIRLHGHQSRENFTFRTEEVIDSDRTNFKDFIDHIREKYPWGVNEFVTMNYFDPVNRNYPQVCSDQSMLEMFDKNMTSKEISMLIQIHKNNEQAVVLPLADWPTPKKVVSGAEPNAVNIHEVPCTPSLAMPSQATISQPSSSTQPVVDMYLENLFEQNEHVGVDDEDMYSDDEIVVAVTNAGQEKEPTDVPKVDSEERDEVEVEVEEGGRRRGRRRKGMRRSNQPEPLSVLMPLAAPGENSKAKAKTDQN

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsAzu_04g0018010 OsAzu_04g0018010.01 Chr04 23043072 23046692 + NAM
CDS seq

ATGGATCCTGGTAAAGCATATCTGTTGAAAATCAGGCTCCATGGGCACCAAAGTAGAGAAAACTTTACATTTAGAACAGAGGAAGTGATAGATAGCGACAGAACAAACTTCAAGGATTTTATTGATCACATTAGAGAGAAGTACCCATGGGGGGTGAATGAATTTGTAACAATGAACTATTTTGATCCAGTAAACAGAAACTACCCTCAAGTATGCTCAGACCAGTCAATGCTAGAAATGTTTGACAAGAATATGACTAGCAAGGAAATATCTATGTTGATTCAAATTCATAAGAACAATGAGCAAGCTGTAGTTCTGCCACTTGCTGATTGGCCAACACCTAAAAAGGTAGTTAGTGGGGCAGAACCTAATGCAGTTAATATACATGAGGTGCCATGTACTCCATCTCTTGCAATGCCATCTCAGGCTACTATATCTCAGCCTAGCAGCAGCACACAACCAGTTGTTGATATGTACTTGGAAAATTTATTTGAACAAAATGAACATGTCGGTGTTGACGATGAGGATATGTATTCAGATGATGAAATTGTTGTGGCTGTCACTAATGCTGGGCAAGAGAAAGAGCCTACTGATGTGCCTAAGGTGGACAGTGAGGAAAGGGATGAGGTTGAGGTTGAGGTAGAGGAGGGGGGGAGGAGGAGGGGGAGGAGGAGGAAGGGGATGAGGAGATCCAACCAACCTGAACCTTTGAGTGTGTTGATGCCACTAGCAGCGCCTGGAGAGAACTCTAAGGCCAAGGCTAAGACAGACCAAAACTAA

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Protein seq

MDPGKAYLLKIRLHGHQSRENFTFRTEEVIDSDRTNFKDFIDHIREKYPWGVNEFVTMNYFDPVNRNYPQVCSDQSMLEMFDKNMTSKEISMLIQIHKNNEQAVVLPLADWPTPKKVVSGAEPNAVNIHEVPCTPSLAMPSQATISQPSSSTQPVVDMYLENLFEQNEHVGVDDEDMYSDDEIVVAVTNAGQEKEPTDVPKVDSEERDEVEVEVEEGGRRRGRRRKGMRRSNQPEPLSVLMPLAAPGENSKAKAKTDQN

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Gene Transcript Chromosome Start End Strand Source
OsAzu_04g0018010 OsAzu_04g0018010.02 Chr04 23042340 23046733 + IsoSeq
CDS seq

AGCCATCCCCAAACTGCAGCAGCTAGCTATCGCCAAACCCTAGCTATCCCCAAATCGTATCGACGGGCGACGGCGGCGGCGGCGACGGCGGCGGCGGCGGCGGCGGCGAGGTGGCTAGGGCAACGGCAAGGGCTCACGTGGTGGTGGCGGCGGTGGCTTCGGTTCCCGTGGCGGCTGCTGCTGCTGCGCGAGGTGGTGGCGGCGGCGGTGGCTGCGGTTCCCGTGGCGGCGGCTGCTGCT

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Protein seq

SHPQTAAASYRQTLAIPKSYRRATAAAATAAAAAAARWLGQRQGLTWWWRRWLRFPWRLLLLREVVAAAVAAVPVAAAAA

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.461190 4.752254 7.703535

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU LOC_Os04g41220 RBH 1.238126 1.854525 0.565384
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) NA NA NA NA NA
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_04g0018800 RBH 0.105869 2.078447 1.705326
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_04g0018500 RBH 1.566154 2.216166 5.492369
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_04g0018220 RBH 0.121216 0.097660 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_04g0018420 RBH 9.927570 11.750669 17.365955
Minghui 63 | MH63RS3 | HZAU NA NA NA NA NA
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_04g0017210 RBH 0.000000 0.098802 1.229784
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_04G0525100 SBH 0.1228435 0.6336125 0.052227
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_04g0017710 RBH 0.174043 0.202507 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_04g0017550 RBH 0.498397 12.377234 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_04g0017610 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_04g0018060 RBH 0.977768 0.647220 0.771770
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_04g0018210 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_04G017510 RBH 0.320903 2.981877 2.261195
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_04g0017440 RBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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