Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_03g0019120 | OGI:03038910 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr03:14954182-14955694 | ||||||||
| Gene Symbol | prx45, prx47, prx48 | ||||||||||
| DNA seq | ATCATCAGCCTGATCATCGAGCACTTCTCTCTCTTCCTGTTATTAGCTATAGCAGCTTAATTAGCTTAAGCACAAAAGGTACAGTAAGCCTAAGCTAGCTACACACTAAGCAAGCTTATTAGCCATGGCTTCATCACCAAGTCTGCCATTGGTGACGTGTGCCCTGCTGCTGCTGCTGGCCGTGGCATGCCAGGCTCACCCTTACTGGCCACTGGAGTTGGCGTACTACCGCGACAAGTGCCCCCAGGCCGAGGCCGTCGTCAAGGCCGTCGTCGGGGAGGCCGTCCGCCAGAACCCCGGCAATGGCGCCGCCGTCATCCGCATGCTCTTCCACGACTGCTTTGTCGAGGTGCGTACGTTAGCTTCTTCCTCTTCTCCGGCGAGATCGATTGATCGACTTGAGCTATGTGTACTTAGATGTGCATGGTGTTTTGTTGTTAGGGTTGTGATGCTTCGATCCTCCTGGACCCGACGCCGTTCAACCCGACGCCAGAGAAGCTGAGCGCGCCGAACAACCCGTCCATGCGGGGCTTCGACCTCATCGACGCGATCAAGCACGCCGTGGAGGCGGCGTGCCCGGGCGTCGTCTCGTGCGCCGACATCATCGCCTTCGCGGCGCGCGACGCCACCTACTTCCTCAGCGGCGGGAAGGTCTACTTCGACATGCCGTCGGGCCGCCGCGACGGGACCTTCTCCAACGACTCCGGCCCGATCGACTTCCTCCCGCCGCCGACGTCCAACCTCAGCGACCTCGTCTCCAGCTTCGCCGTCAAGGGCCTCTCCGTGGAGGACATGGTGGTGCTCTCGGGCGCCCACACCGTCGGCCGCTCCCACTGCTCCTCCTTCGTCCCCGACCGCCTCAACGCCTCCGTCTTCTCCGACATCGACGGCGGCTTCGCCTGGTTCCTCAGGTCGCAGTGCCCGCTCGACGCGACGCCCGGCGGCAACGATCCCACGGTGATGCTGGACTTCGTGACGCCCAACACGCTGGACAACCAGTACTACAAGAACGTGCTCGACCACAAGGTGCTCTTCACCTCTGACGCGGCGCTCCTGACGTCGCCGGAGACGGCGAAGATGGTGGTGGACAACGCCGTCATCCCCGGGTGGTGGGAGGACAGGTTCAAGGCGGCCATGGTGAAGTTGGCGAGCATCCAGGTGAAGACCGGGTACCAGGGGCAGATCAGGAAGAACTGCAGGGTCATCAACTACTGATTAATCTACAAGTTTAGCTGCGTGATTCAATTACCTGGTGAAGTACGTGCTCAACGATGACGACGTACACGGTTTGATAGTTTCACACCCTCCTTGATCAAGTCGCAAGCGTACGTGTTGATGATGTTATGATTGGATGTGACTTTTGCTTCACATTTATGTTCTCCCTCTTTTGTTACCATTCCTTAATTCCTCATTTGTGAACCCCAAGGTTTACATGCTATGGATTTCTTTGTTTTGACCTAATTGTGTAATAAGGTCATATGTACTTGGAATAATTGTAAGTTAAGTTTTTTGC
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| CDS seq | ATGCGGGGCTTCGACCTCATCGACGCGATCAAGCACGCCGTGGAGGCGGCGTGCCCGGGCGTCGTCTCGTGCGCCGACATCATCGCCTTCGCGGCGCGCGACGCCACCTACTTCCTCAGCGGCGGGAAGGTCTACTTCGACATGCCGTCGGGCCGCCGCGACGGGACCTTCTCCAACGACTCCGGCCCGATCGACTTCCTCCCGCCGCCGACGTCCAACCTCAGCGACCTCGTCTCCAGCTTCGCCGTCAAGGGCCTCTCCGTGGAGGACATGGTGGTGCTCTCGGGCGCCCACACCGTCGGCCGCTCCCACTGCTCCTCCTTCGTCCCCGACCGCCTCAACGCCTCCGTCTTCTCCGACATCGACGGCGGCTTCGCCTGGTTCCTCAGGTCGCAGTGCCCGCTCGACGCGACGCCCGGCGGCAACGATCCCACGGTGATGCTGGACTTCGTGACGCCCAACACGCTGGACAACCAGTACTACAAGAACGTGCTCGACCACAAGGTGCTCTTCACCTCTGACGCGGCGCTCCTGACGTCGCCGGAGACGGCGAAGATGGTGGTGGACAACGCCGTCATCCCCGGGTGGTGGGAGGACAGGTTCAAGGCGGCCATGGTGAAGTTGGCGAGCATCCAGGTGAAGACCGGGTACCAGGGGCAGATCAGGAAGAACTGCAGGGTCATCAACTAC
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| Protein seq | MRGFDLIDAIKHAVEAACPGVVSCADIIAFAARDATYFLSGGKVYFDMPSGRRDGTFSNDSGPIDFLPPPTSNLSDLVSSFAVKGLSVEDMVVLSGAHTVGRSHCSSFVPDRLNASVFSDIDGGFAWFLRSQCPLDATPGGNDPTVMLDFVTPNTLDNQYYKNVLDHKVLFTSDAALLTSPETAKMVVDNAVIPGWWEDRFKAAMVKLASIQVKTGYQGQIRKNCRVINY |
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| Function | Peroxidase 2 [UniProtKB/Swiss-Prot:Q9FEQ8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_03g0019120 | OsAzu_03g0019120.01 | Chr03 | 14954188 | 14955691 | + | NAM | ||
| CDS seq | ATGCGGGGCTTCGACCTCATCGACGCGATCAAGCACGCCGTGGAGGCGGCGTGCCCGGGCGTCGTCTCGTGCGCCGACATCATCGCCTTCGCGGCGCGCGACGCCACCTACTTCCTCAGCGGCGGGAAGGTCTACTTCGACATGCCGTCGGGCCGCCGCGACGGGACCTTCTCCAACGACTCCGGCCCGATCGACTTCCTCCCGCCGCCGACGTCCAACCTCAGCGACCTCGTCTCCAGCTTCGCCGTCAAGGGCCTCTCCGTGGAGGACATGGTGGTGCTCTCGGGCGCCCACACCGTCGGCCGCTCCCACTGCTCCTCCTTCGTCCCCGACCGCCTCAACGCCTCCGTCTTCTCCGACATCGACGGCGGCTTCGCCTGGTTCCTCAGGTCGCAGTGCCCGCTCGACGCGACGCCCGGCGGCAACGATCCCACGGTGATGCTGGACTTCGTGACGCCCAACACGCTGGACAACCAGTACTACAAGAACGTGCTCGACCACAAGGTGCTCTTCACCTCTGACGCGGCGCTCCTGACGTCGCCGGAGACGGCGAAGATGGTGGTGGACAACGCCGTCATCCCCGGGTGGTGGGAGGACAGGTTCAAGGCGGCCATGGTGAAGTTGGCGAGCATCCAGGTGAAGACCGGGTACCAGGGGCAGATCAGGAAGAACTGCAGGGTCATCAACTAC
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| Protein seq | MRGFDLIDAIKHAVEAACPGVVSCADIIAFAARDATYFLSGGKVYFDMPSGRRDGTFSNDSGPIDFLPPPTSNLSDLVSSFAVKGLSVEDMVVLSGAHTVGRSHCSSFVPDRLNASVFSDIDGGFAWFLRSQCPLDATPGGNDPTVMLDFVTPNTLDNQYYKNVLDHKVLFTSDAALLTSPETAKMVVDNAVIPGWWEDRFKAAMVKLASIQVKTGYQGQIRKNCRVINY
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_03g0019120 | OsAzu_03g0019120.02 | Chr03 | 14954182 | 14955694 | + | IsoSeq | ||
| CDS seq | ATGCCAGGCTCACCCTTACTGGCCACTGGAGTTGGCGTACTACCGCGACAAGTGCCCCCAGGCCGAGGCCGTCGTCAAGGCCGTCGTCGGGGAGGCCGTCCGCCAGAACCCCGGCAATGGCGCCGCCGTCATCCGCATGCTCTTCCACGACTGCTTTGTCGAGGG |
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| Protein seq | MPGSPLLATGVGVLPRQVPPGRGRRQGRRRGGRPPEPRQWRRRHPHALPRLLCRG |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 279.647675 | 0.421681 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0368900 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g25330 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0368900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0003950 | SBH | 0.0 | 0.0 | 30.419088 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0003990 | SBH | 0.0 | 0.0 | 41.237720 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0003940 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0004040 | SBH | 0.0 | 0.0 | 82.438393 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0240300 | RBH | 2.454506 | 58.2449035 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0003930 | SBH | 0.0 | 0.0 | 17.086309 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0240400 | RBH | 1.881955 | 9.5509355 | 0.0184975 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0004040 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0004010 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0003980 | SBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0018791 | RBH | 0.673227 | 13.563496 | 0.777037 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0004020 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G003990 | SBH | 0.0 | 0.0 | 9.905877 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0003850 | SBH | 0.0 | 0.0 | 75.526115 |
