Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsAzu_03g0008270 | OGI:03015850 | 15/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr03:5902007-5905598 | ||||||||
Gene Symbol | OsIRL7 | ||||||||||
DNA seq | AGTACAGATCCCACCAAAGTCGACGAGACGACCAAGCTCTTCTTCCTCCCTGCGAACAAAAAAAAAAATCTCCTCCCCGCGTCGAATTCGAAGGGGAGAGAGCGCCGCGAGCGAGCGAGTTTGGCGGCGAGATGGGCTGCTGCAGCAGCCGGAGCGCGGACTCGCCGGCCAGCCGCGTCACGCGCTGGCGCTCCACCGGGATCGTCGCCCTCCGCGACGCCAGATTGAAGGTTCCTGTTGATTGATTTTTCCTGTAAATTTAGTACCATTGGGGATTCTGTCTAGTCTGCTAGTTGGGGCGTGGAGGAATTTCGGTGCTCCCGAGTTCTTATCATCTGATGCTTAGTGATTCGGGTACACGATGACACGACAAATATGATGATGCATCCTAGGATTTCTGTTAATCAGCCGAAGGGGTCTACTGCCACATAGGCGTTAGGTTAAGCAAAGGTGTGATTTTTGGATTGCTTGCGGGTGTTTTAATCCTATGGGATTGCTAGGTGGAGGTCTGAAGGAAAGGCACAATCTTGCCGTTACAAGTATGTAATCATATGTGGTGATTGGTGAATGGTGATGGCCTGATGGGTTAACTTGGCCAATTCTTTTTCACTGTAGTTTCAGGGAATGCTGATGGTTAAAAACTTTTTGCCCATGGCACTTCCACACTTTATACTTACCCTTTATTCTCTCTCTCTAAAACAACTGCTGTACTTTCTCCTCTATTTGCATAATGGAGCTACTGCCTATCAATAATTAAATTCTTAATTAGCATGGGAAGTACTTTTTGCGACTAAATATTTAATAAACACTCACCAGATTGTAAGATTTTAGTGCTTTGTTCCATGTCCAGAAGATAGAGGTGCATTTTAATATTGGCGTTAGTTCTCATTCATTTGTTTGTCCTCATATCAGTATGTGATATGTTCTACTATCTCATCTAAAATATATATTTATCCTGCAAGTCAATGCCAATTTATATTTAATTTTCTTCGAAGAACGAAGACACAAGGTTCTTTTACTGTGAAATTGAACTTTTCTTCCAAAATTGTTAAATGTCAATGTTACCATGCAGGTAGTACCAAATGAAGTTCTACAAGTAGGGAATTCCCTGAGGATTCTGGATTTGACTAACAATAAGATAGGTATTTGGACTTTAGACCATGACCCCTGGATACTTAGAAGTTCTGCAATGCTAGTATCAATATTTTCTCTCTTTTTTTTTCTCATATATTGTCAGGAAGAAACTAGTTTGGAGTCGTTCATTGCTTCTTTCTTTCTTTTATTATGCACATCAGTATCAGATGGGAGGAAAAAAATTATGCACACCCCTTTTTTTTCACTTGGCATCACTAACAAATGCATATACTTGAAGCAAGTCAGCAACAATTCGACAAGTTATTTTTTTTACCTTGCAGGGTTTCTTTGACAGTTTGGGTAGAAAAAAAATCCAATTGAACTGCACACACTGTATTTAGATGTTTCTATATCTTGAGAAATATCAATTAAATATATATTTTATGTTGCAGCTGAGATTCCCCAGGAAGTTGGCACACTCGTGAATATGCAAAGACTTGTAAGAGTTAATGTTAATAGAAATCATGATTTGGTTCATCTTACCAAGTTACTAGAGACATGTATTTTTAAGAGTGGTTCTTCTTTGCTTGACATTTAAGTTTACTATTTCTTTTCTGTTCCTGTAGGTTTTGGCTGGTAATTTGGTTGAAAGCATCCCAGCTAACATTGGATATCTGCGGAATCTTAAAATCCTCACACTTGACAGAAATAAGATCTCTGTCTTACCTGAAGAATGTTAGTTCATAAAAACCTAATGCTATCTTTATTTATATGTTTAGATAATATTTATCATTTGTCCACGTGTATATTCTTAATCCTAGCAACAAGTTAGTAGAGATTTATTGACTTTTGCAATATTACACTTCACAATTTCCCACGTCTAAGTCCTAACTTGTTTCTTCCATTCTATCCAGTGGGTTCTCTATCAAATCTTCAACAACTCTCTATTTCTCAGAATTCTTTATCACGCCTGCCTAAGAGTGTAGGAGATTTGCGCAATGTAAGTTTCTTATTCGATTCAAGATGTTAAATTTTATATATCTTTGAAAAGCAACTTTTCTAGGCACAAAATATTTTTTTGTCTTCTCAAAACTTTTTTTTGGTATAGCATGAATGCCTTCAGAGTTACAAGCTGTTCCTTCTTTTTATTTTCCTCTTCAGAATCAAATAAACTCTTGATTCTATATTTCCTCATATGAAATTTACGCAGCTTGTTACATTCCGTAAAGTTTCTTCTTTACTAGTAAGTATTTTAAACTTGTTTTAATAATGGAGACTATGCTGTGCTCATCACTGTTTTTTCAACCTTTTTTTTTTCCTGATGCAGATGTTGCTACTCAATGTATCTGACAACAAACTAATTGCACTTCCTGAATCAATTGGAGGTTGCAGTTCCCTGGAAGAATTGCAGGCAAATGGTAAGTCCATCAGTTTTTTGCAATGGTAGCATTTATATCATTTCAATTTTCTCTGCACCCTGTTCACATGCATCCATGTTAATGCTATACTGCTGCCACACACACACACACACACACACACACAAACATGAGTGCTCTGTGCCGTCGTACTTTCCTATCTCGTATGCTATACCACCTGATATTCCATTGGGAAAGGCATGCCAGAACCATTTTTAGATACCTTTTGTCATCTAACTCAAATATGATCCAACCATTCATATGCTGTTTAAAAAAAAATGCAAAGCACATCGTGGTTTTCGTTTTCGATGCATCATCTTAGATAACCTTCACGAAAACATTTTCAGGAAATTCAATTGAAGACGTGCCTTCATCAATCTGTAACCTTGTTTGCCTCAAATCCCTATCATTGAACGGGAATAAGATTCGTCAGGTACGAACTTATGAATATGCTTTTCCCTCGTCGATTACTTCTGTGTTTGAACCTGGAGGCTCTAGGGTCAAAGTCAGTGAATAATGACTATTCATTTAGATTTGAAATATCCTGGTTACATTGTTGCCAACTTGTAACGTACAAAATAATAAGCAAAGATTCTCCGAACTTTGACTCTCCCTGACAGCTTCCCCAAAACCTACTGAAAGACTGCAAGGCTCTTCAGAACATATCGTTGCATGACAATCCAATCTCGATGGACCAGTTTCAACAAGTTAGTGGCATGAAAGCTTAATACAGATTCTTGTAATTTGATTAATCTTGATTCAATTATAATTTGTTTTCTTTGTCTGTTGAAGATGGATGGCTTTACGGAATTTGAGGCACGCCGAAGGAAAAAATTTGACAAACAGATTGATTCAAATGTCATGATGAGTTCCACAGCACTGGATGAAGGCATTGATTTGAACTAGTTTTTCAGAAATTTTATTTAGTTTATAATTACCCCATTAGTCAAAAGACCAACTGTAAATCTAGTGTACATATTAGTTTTTCCGATACTCTGATTTGGTAAAAAGACAAAAAAATGTATAACACACACTAATGAATGAACTGTGTAATTTTTGCAAATATTCAATGAATTAGGTGTACATCACCATCTTTGATCTAC
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CDS seq | ATGGGCTGCTGCAGCAGCCGGAGCGCGGACTCGCCGGCCAGCCGCGTCACGCGCTGGCGCTCCACCGGGATCGTCGCCCTCCGCGACGCCAGATTGAAGGTAGTACCAAATGAAGTTCTACAAGTAGGGAATTCCCTGAGGATTCTGGATTTGACTAACAATAAGATAGCTGAGATTCCCCAGGAAGTTGGCACACTCGTGAATATGCAAAGACTTGTTTTGGCTGGTAATTTGGTTGAAAGCATCCCAGCTAACATTGGATATCTGCGGAATCTTAAAATCCTCACACTTGACAGAAATAAGATCTCTGTCTTACCTGAAGAATTGGGTTCTCTATCAAATCTTCAACAACTCTCTATTTCTCAGAATTCTTTATCACGCCTGCCTAAGAGTGTAGGAGATTTGCGCAATATGTTGCTACTCAATGTATCTGACAACAAACTAATTGCACTTCCTGAATCAATTGGAGGTTGCAGTTCCCTGGAAGAATTGCAGGCAAATGGAAATTCAATTGAAGACGTGCCTTCATCAATCTGTAACCTTGTTTGCCTCAAATCCCTATCATTGAACGGGAATAAGATTCGTCAGCTTCCCCAAAACCTACTGAAAGACTGCAAGGCTCTTCAGAACATATCGTTGCATGACAATCCAATCTCGATGGACCAGTTTCAACAAATGGATGGCTTTACGGAATTTGAGGCACGCCGAAGGAAAAAATTTGACAAACAGATTGATTCAAATGTCATGATGAGTTCCACAGCACTGGATGAAGGCATTGATTTGAACTAG
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Protein seq | MGCCSSRSADSPASRVTRWRSTGIVALRDARLKVVPNEVLQVGNSLRILDLTNNKIAEIPQEVGTLVNMQRLVLAGNLVESIPANIGYLRNLKILTLDRNKISVLPEELGSLSNLQQLSISQNSLSRLPKSVGDLRNMLLLNVSDNKLIALPESIGGCSSLEELQANGNSIEDVPSSICNLVCLKSLSLNGNKIRQLPQNLLKDCKALQNISLHDNPISMDQFQQMDGFTEFEARRRKKFDKQIDSNVMMSSTALDEGIDLN |
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Function | Plant intracellular Ras-group-related LRR protein 7 [UniProtKB/Swiss-Prot:B9F655] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsAzu_03g0008270 | OsAzu_03g0008270.03 | Chr03 | 5902040 | 5905596 | + | NAM | ||
CDS seq | ATGGGCTGCTGCAGCAGCCGGAGCGCGGACTCGCCGGCCAGCCGCGTCACGCGCTGGCGCTCCACCGGGATCGTCGCCCTCCGCGACGCCAGATTGAAGGTAGTACCAAATGAAGTTCTACAAGTAGGGAATTCCCTGAGGATTCTGGATTTGACTAACAATAAGATAGCTGAGATTCCCCAGGAAGTTGGCACACTCGTGAATATGCAAAGACTTGTTTTGGCTGGTAATTTGGTTGAAAGCATCCCAGCTAACATTGGATATCTGCGGAATCTTAAAATCCTCACACTTGACAGAAATAAGATCTCTGTCTTACCTGAAGAATTGGGTTCTCTATCAAATCTTCAACAACTCTCTATTTCTCAGAATTCTTTATCACGCCTGCCTAAGAGTGTAGGAGATTTGCGCAATATGTTGCTACTCAATGTATCTGACAACAAACTAATTGCACTTCCTGAATCAATTGGAGGTTGCAGTTCCCTGGAAGAATTGCAGGCAAATGGAAATTCAATTGAAGACGTGCCTTCATCAATCTGTAACCTTGTTTGCCTCAAATCCCTATCATTGAACGGGAATAAGATTCGTCAGGTACGAACTTATGAATATGCTTTTCCCTCGTCGATTACTTCTGTGTTTGAACCTGGAGGCTCTAGGGTCAAAGTCAGTGAATAA
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Protein seq | MGCCSSRSADSPASRVTRWRSTGIVALRDARLKVVPNEVLQVGNSLRILDLTNNKIAEIPQEVGTLVNMQRLVLAGNLVESIPANIGYLRNLKILTLDRNKISVLPEELGSLSNLQQLSISQNSLSRLPKSVGDLRNMLLLNVSDNKLIALPESIGGCSSLEELQANGNSIEDVPSSICNLVCLKSLSLNGNKIRQVRTYEYAFPSSITSVFEPGGSRVKVSE
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsAzu_03g0008270 | OsAzu_03g0008270.01 | Chr03 | 5902007 | 5905598 | + | NAM | ||
CDS seq | ATGGGCTGCTGCAGCAGCCGGAGCGCGGACTCGCCGGCCAGCCGCGTCACGCGCTGGCGCTCCACCGGGATCGTCGCCCTCCGCGACGCCAGATTGAAGGTAGTACCAAATGAAGTTCTACAAGTAGGGAATTCCCTGAGGATTCTGGATTTGACTAACAATAAGATAGCTGAGATTCCCCAGGAAGTTGGCACACTCGTGAATATGCAAAGACTTGTTTTGGCTGGTAATTTGGTTGAAAGCATCCCAGCTAACATTGGATATCTGCGGAATCTTAAAATCCTCACACTTGACAGAAATAAGATCTCTGTCTTACCTGAAGAATTGGGTTCTCTATCAAATCTTCAACAACTCTCTATTTCTCAGAATTCTTTATCACGCCTGCCTAAGAGTGTAGGAGATTTGCGCAATATGTTGCTACTCAATGTATCTGACAACAAACTAATTGCACTTCCTGAATCAATTGGAGGTTGCAGTTCCCTGGAAGAATTGCAGGCAAATGGAAATTCAATTGAAGACGTGCCTTCATCAATCTGTAACCTTGTTTGCCTCAAATCCCTATCATTGAACGGGAATAAGATTCGTCAGCTTCCCCAAAACCTACTGAAAGACTGCAAGGCTCTTCAGAACATATCGTTGCATGACAATCCAATCTCGATGGACCAGTTTCAACAAATGGATGGCTTTACGGAATTTGAGGCACGCCGAAGGAAAAAATTTGACAAACAGATTGATTCAAATGTCATGATGAGTTCCACAGCACTGGATGAAGGCATTGATTTGAACTAG
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Protein seq | MGCCSSRSADSPASRVTRWRSTGIVALRDARLKVVPNEVLQVGNSLRILDLTNNKIAEIPQEVGTLVNMQRLVLAGNLVESIPANIGYLRNLKILTLDRNKISVLPEELGSLSNLQQLSISQNSLSRLPKSVGDLRNMLLLNVSDNKLIALPESIGGCSSLEELQANGNSIEDVPSSICNLVCLKSLSLNGNKIRQLPQNLLKDCKALQNISLHDNPISMDQFQQMDGFTEFEARRRKKFDKQIDSNVMMSSTALDEGIDLN
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsAzu_03g0008270 | OsAzu_03g0008270.02 | Chr03 | 5902007 | 5905598 | + | NAM | ||
CDS seq | ATGGGCTGCTGCAGCAGCCGGAGCGCGGACTCGCCGGCCAGCCGCGTCACGCGCTGGCGCTCCACCGGGATCGTCGCCCTCCGCGACGCCAGATTGAAGGTAGTACCAAATGAAGTTCTACAAGTAGGGAATTCCCTGAGGATTCTGGATTTGACTAACAATAAGATAGCTGAGATTCCCCAGGAAGTTGGCACACTCGTGAATATGCAAAGACTTGTTTTGGCTGGTAATTTGGTTGAAAGCATCCCAGCTAACATTGGATATCTGCGGAATCTTAAAATCCTCACACTTGACAGAAATAAGATCTCTGTCTTACCTGAAGAATTGGGTTCTCTATCAAATCTTCAACAACTCTCTATTTCTCAGAATTCTTTATCACGCCTGCCTAAGAGTGTAGGAGATTTGCGCAATATGTTGCTACTCAATGTATCTGACAACAAACTAATTGCACTTCCTGAATCAATTGGAGGTTGCAGTTCCCTGGAAGAATTGCAGGCAAATGGAAATTCAATTGAAGACGTGCCTTCATCAATCTGTAACCTTGTTTGCCTCAAATCCCTATCATTGAACGGGAATAAGATTCGTCAGGTACGAACTTATGAATATGCTTTTCCCTCGTCGATTACTTCTGTGTTTGAACCTGGAGGCTCTAGGGTCAAAGTCAGTGAATAA
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Protein seq | MGCCSSRSADSPASRVTRWRSTGIVALRDARLKVVPNEVLQVGNSLRILDLTNNKIAEIPQEVGTLVNMQRLVLAGNLVESIPANIGYLRNLKILTLDRNKISVLPEELGSLSNLQQLSISQNSLSRLPKSVGDLRNMLLLNVSDNKLIALPESIGGCSSLEELQANGNSIEDVPSSICNLVCLKSLSLNGNKIRQVRTYEYAFPSSITSVFEPGGSRVKVSE
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsAzu_03g0008270 | OsAzu_03g0008270.04 | Chr03 | 5902054 | 5905596 | + | IsoSeq | ||
CDS seq | CTGCGAACAAAAAAAAAAATCTCCTCCCCGCGTCGAATTCGAAGGGGAGAGAGCGCCGCGAGCGAGCGAGTTTGGCGGCGAGATGGGCTGCTGCAGCAGCCGGAGCGCGGACTCGCCGGCCAGCCGCGTCACGCGCTGGCGCTCCACCGGGATCGTCGCCCTCCGCGACGCCAGATTGAAGGTAGTACC |
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Protein seq | LRTKKKISSPRRIRRGESAASERVWRRDGLLQQPERGLAGQPRHALALHRDRRPPRRQIEGST |
Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
RI | Chr03 | 5904843 | 5905202 | + | OsAzu_03g0008270.03 | OsAzu_03g0008270.03,OsAzu_03g0008270.01,OsAzu_03g0008270.04 | All |
SE | Chr03 | 5904080 | 5904408 | + | OsAzu_03g0008270.04 | OsAzu_03g0008270.03,OsAzu_03g0008270.01,OsAzu_03g0008270.04,OsAzu_03g0008270.02 | All |
Expression
Leaf | Root | Panicle | |
FPKM | 0.362500 | 9.819787 | 0.000000 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
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Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0212200 | RBH | 0.599357 | 1.030744 | 5.392077 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g11360 | RBH | 0.323508 | 0.533765 | 1.343986 |
Nipponbare | IRGSP 1.0 | RAP-db | Os03g0212200 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0008240 | RBH | 0.000000 | 2.639196 | 2.004781 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0008320 | RBH | 0.923653 | 6.219962 | 6.281060 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0008310 | RBH | 0.136177 | 0.089696 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0008180 | RBH | 3.887095 | 0.0 | 4.903060 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0099100 | SBH | 2.809285 | 4.1481495 | 3.222897 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0008120 | RBH | 0.070513 | 1.416314 | 0.186661 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0099800 | RBH | 2.6284375 | 2.998485 | 3.606788 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0008140 | RBH | 0.0 | 0.000000 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0008210 | RBH | 0.197801 | 4.761286 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0008190 | RBH | 3.474531 | 0.000000 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0008200 | RBH | 0.145253 | 0.186877 | 0.567121 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0008170 | RBH | 0.135041 | 2.048256 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G008210 | RBH | 0.000000 | 2.198548 | 1.961182 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0008080 | RBH | 0.000000 | 5.336776 | 5.128040 |