Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_02g0009020 | OGI:02019860 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr02:6707315-6714381 | ||||||||
| Gene Symbol | RLCK68, OsRLCK68, - | ||||||||||
| DNA seq | CGAATGTGGTATTTACATTCTGTTGCAACACACAAGTACTTGGCTAGTCATAGAAGCAAACCAAAAGTTTTCTCTGGCGATGACAAAGATGCGCAAAACATGATCTGAGAACCAAAGGCTGCTCATCACCCACTTGGCATCTTGGGCATGTCACATTACATACAGAAATGCATTGCCTTAATCTTTCCTTTACATGGTTTAATTTTCTCCTCTTAATCATCTACATGCTAATGATTAATCACCCAAACTATGTTGCGCCATTAAGTAACATCATCAGCTCAGCTGCAGTCCACACAGAGCGAAGGCAGCAGCAGCAGTGCCTTTTAATCATCTATACATTGCAGCTGCAGGTGCAGCAGCCATGGAGGATGGAGGCAGCAGAGACTCTGATCATGGCGTGGAGACGTCGTCGCCGCCGAAGCTGTAGGGAGCGGAGCTGGAGCAGGTGGTGCTGGTGCTGCTGACCTTGGAGGCGTCGTACTCCTGGCTGAGGCAGCGCAGCCGGTTGAGCTCCGGCAAGATCTCCTTCCCGAGGTCCGGCCGGTCCTTCTTCCTCAGCTCGGCGCACCGCAGCGCCAGCTTGGCGAACACCAAGGCCTCCTCCACCGGCCAGTCGGTCACCATCGGGTCGAGCACCTCCTGGAAGGTCCCCCTCTCGATGGCGCTCTCGACGTGGTGGGTGAGCCCCATGGGCGACCTCGCCGTGATGATCTGCAGCAGCAGGATCCCCAGCGAGTAGATGTCGGACATGGTGGTCAGCATCCCGGTCTGCTGGTACTCCGGGTCGATGTAGCAGAAGGTGCCCGCCGTCGAGGTCATCCGGTACTGCGTGGCCTCGGCGGCGGCAGCGGACTGCGGGACGAGGCGGGCGAGGCCGACGTCGCTGATCTTGCTGACGAAGTTGTGGTCGAGGAGGATGTTGGCCGGCTTCAGGTCGCGGTGGACCAGCGGCTCGGGCTTCGCCTGGTGGAGGAAGAGGAGGCCGGTGGCGATGTCGGCGGCGATGCGGAACCGGATGTTCCAGGGGATCGGCAGCGTCTTCCCCCGCCGGCACAGCCGGTCCTCCAGGCTGCCGTAGTCCATGTACTCGTACACCAGGCACCCGTACTCCGGGCATGCTCCCAGCAGCAGCACCATGTTTGGATGCCTCATGCAGCTAAGCACTTCTATCTGAACAACAAAATAAATAAATTACAACTTATTCATCACCATGCAGTTTATTAATTACTCCCTCTGTTTCAGATTATGAGTCGTTTTGACTTTGGTTAAAGTCAAACTGTTGTAAGTTTGACTAATTTATTAGTCTATAATTAGTTCTATTAAATCTATAATTGAATATATTTTTATAATATATTTGTCTTGGGTTGAAAATATTATTATTAATTTTCTGTAAATTTGGTCAAACTTGAAGCAGTTTGACTTTGACCAAAGTCAAAACGACTTATAATATGAAACGGAGGGAGTAATTAGCTTGATCATGACATGACTATCTTTTGCATAATTGACATCATATATTTGATCTGCCCAAAAAAAAGAAGAAGAAACTCTCACTACATGCAGTTTATGAGCTTGGTTATAACTATCGTTTGCATAATTGACATGCAGATAATTTAGATATTTGAATGGTAAATATGGGTAGGAAGATAAAATGTCTTCAAAAACATATGATTGAAATAATGATGTTCTGAACTAACTCATTGTCAGATCATTAAATCCTTCAAAAACAAAAAAGAGAAAATTTGCTTCCTGATGGTGAGAGAAAATATTGCATTCAGTTTTAGTTTGGTTGTACTAATATGTTAACTCAAAACAACCCTGAATATACTGAAAAGATGAAGAATTTACTAGATACTCCTATATTAGATTTACCTCTTGCTGAAACTGTTTCCTCCCTTGTGATGCATCTGGCCTTAAGATTTTAATGGCGACATTAGTATGATCCATGACAGCTTTATACACCGGCCCATATCCACCTTCCCCTATCTTGAGTGCCTTGTCAAACTTATGGGTGGCAGCTTCAATGTCATCAATGGAATACCTCCTGTACCTTAAATCAGTGTTGTTCATTGCTTCTGTTGCTCTCTTCCTCTCCTCGGCTTCGCGCTTCGCCTTCCACTCTGCTCTCAGTCTCTTCTGAGCCTCCAGCTCTGCAATTCTCTGTGCAGCCTCTGCTGCTTCCAGTGCGGCTCTGCACTTTGCCTTCTCCATTTGGACCAGAGCAAGGGCTTCCTCTTCAGCATTCCTGAGTTCTTGGTACTTCTTGGACTCTTCCATCTTCATCTGGTGCATCTGAGCAGCCTGCTGATTTGATCATTATTCACTATTGTTTCAAAATATTTCAGATAATAGTTGAAATTTACAGCGACATAGAAGTGGGCAGACCTTCTGTTTAGCATCAATTGCTTCCTTGCATGCGGAGTTGTACATTTCCATTGTCTGCTTCAGCTCTAGTCTCAGCCGTCTCATTTCCGTTTCGACATCCTTCTGAATTTCAAACGACACAAAAATAAGAGTTGATCAAAGTCCAATACTCTAAAAGATTCCAGATCACCAAGATTTTGATCAACTGCAGCAAAACTGATGTTGCCGGTGTGCTTGCTTACCCCAGCTGAGCTTAGGCTTTCGATGGACATTGATGCGGAAAGCGAAAGCTCCAAAGAATCGCCGAAGTCCATCGATGGCAACTCCAAGCTCAAAGGAAAATCAACATCATCTGAAAAGGAGCTACGGGTTACCGAGGGCCTTGGAGGAGCTATGAAGTCGATATAGTCGTCGAAATCCTTTGGGGGTGCTGATCTAGCTCCAGAGAGAGGCCTTTCCCTGGTTGGAGCTTTTGCAAAGCCAGATAGTCGGTCCACCGATGGTCTGTTTGCCTTTGGAGATGATTGATTGGAAATCTTCTTCCAGTCTCCTCTTGATCTGTTCAGCAAACCCGGAACATGATTTCGTATTATGTTAGCAAGTTCAGAAGGTAAACCGAGTGACATGACTGATAAACATATCTATATCTACTTATTTGCATACAGGTGTTTAGATTTTAGAATCTGATTACTTCAAACCATTTTGCAATGTAATTATTGAGTGAAGCGATTATTCCTTATCGACAAACTTACCTCGGATATCCATCAGATTCTATGCTTGACTGTGAGTACTGTTTGGGAGGGAGAGTGGTAAAGGGTGCTGGGGCTTTGGCTGCCTTGACTTGGATTGCCTTCCCTTTGTGGATGACATGCACTGTGCAGTAATCAGGCACCATCTTCATCAAGCATGTTGGCACATCAGGATTTCTGAACTTTCTGCAGGACACGAGGTTCATGACTGTGTTCAGTTATTACAGGTTATCAAGGGATTGGGGAATGGTGCACAGCACAGCCATGGAGGAATGAACAGTCATGCACCTGATGAATGTGTTCCTCGTCGACGCCCCGACGACGATGTCGGTGATGGCGTTGCTAGTGGCATACTCGACTATTGCTTTGGAGATGTCACTGCCATCCAAGATCACTTCCTTCAATTGCATCTGCAGTTTGCAATGTAAGTATTTCTTGAGCTTATTTTGTTCCATTTGATTTTGTTATTGTCATCTTATTCTAGTAGTGAAAAAAAAACATGTATCTGATAAGATAGTAGTATATATATTGGGGCAATTATATATTCTATTGGCACTCACCCCTTTACGAGCACAATAGCCTCTGTATGAGATGAACATCTGTTGCATCTCTGCATCCGCTCCTGCTTCAGCTGCAGCATGAAGAAATTTGTTGATGAAATTAAATAAACCAGGGTAAATTGGAGAAAAATACATAAATTAGCTACCGGAATCTAACAAACTATATGCAGAATTTTGAAAGAATGCGTATTATCGACAAAATCATGCCCATTTTGTCGTGTCTGAATTTTCCATCTTCCTACAAACTTCCATTGCATGATGGCAAAATGCGTAATATTAGCTAACCCATGAAATCCAAACAACTACATGCATTTCAAATAAAATGTGCATTGTCGACAAAATCATGCCCATTTTGTTGTCTCTGAATTCTTCATCTTCCTGCAAACTTTCACTGCATGATGGCACAATGCAAACCATGCACATTCTCTTCCACATCCAATTATTGCATCTCTCCAATTCGACCAAGAAAAAAAGTAGTGTTTTTTTCCTCTCACTGATATCTCTTGCATTGCAAGATTAGCTTTGGTTCATGCAGATTCATGGAGCATTACCATTTTGCTGTGGCTTGACATGGACGAGCTGGAGAACGCTGCCCCTGGCGAGGAGCCGGTCCACCGCCCACTTGACCGCCTGCTGGCTGTTCTTGTCCCGGTCGACGGCGACCACCGTGGAGCTGTCCCTGGCCTCGCTGTCCCCGCCGCCGTGCGAAGACGCCGAGGAGGAGAAGGCCGACAGGTACATGCTCCCCGCACCTCGCCGGCAAAAAGATCGTCGGAGTCGGAGAAGGAGAGGAAGAGACAAAAAAAAAAAAAAGGATTCTTTTGCTTCTCCTCCTCTCCCTCTTCTTCCCTCTTCTTCCCTCTCCTCCGGTTTTTTGATCAAGCCAACCAAAAACTGCAGGAGGTTTCGCTGTTTTTTTTTCTTCATTTTTTTTGGGGCCAAATTTAGGTGCTGCAGCGTTGTTAATGGCCGTTGGCTTACTTATGTTTTTGTGGCTCTTGTGTCCCCACTTGTCATTGACTGCAGGTGTTGCTCTCTGATCTATTTTTGCATGTCCTTGTGTGCATCCTAGTTGAAACACGGATGATATATACAGTCTTGCATTTTTTTTAAAAGGGAGTGTAGTTTACAATGTACAAAACCCCTACAAATTTGATAAATCATACTACGTAATTTTGATCTAAAAAACCATAATGGTTTTTTTTCCTTTGTCAGAAAGACTGGTCTGAACTTGAAAAATGTAACTATGAAATGCCACTTACCCCTTCTTTTTATAAAGCTAATACCCACTAAACACTTAAAACTCAATATGTAAGCATAATATTTATTAGCACTTGTAAAACCTATATGCAAGCATAATATTTATTAGCACTTGTAAAACCTATATGCAAGAATGCCACATCGACCCATTAAACACAAAAAGCTCAACATGTAAACATATAGTAATTGTATCTATAATTTATTTTCATTCTAAAACTAAACATACACATGCTAAATCATCATTCTCAAATCATTCTCATATTATTTTAATCCAAATCATTTCATCATTTCTCCAATATGTAACATATATCCCGCAACAAAACATGGGGCATCATCACCATTTGTTTCATATATGGAGGTAATTTTCAGGGCAACATATTGGCTCTGGTTTTGGGCACAGTTACAAAGGTCTGATGAAGACGAAGATCTTTTAAAAGTTGCATGCAATAAACTTGAGTCGATGGTTATGCAGTTTTTTTTGCCAATCATGAATGAAGATTCATAAATAGGCTTTAATAATATGTTCTCCATATCTTTTATTGGTTATTTTTATCTTTATTTACTGGTTGCTATTATTTTTGGACTATACTTGTTTTGAGTGCTAGACTGTAATAATAGGCTGTAGCTCTTTTGAGTAAAGGCCGGGATGTTATATTCCATTATCAAATCTAGTTATAACCTTTCAATACATTACCTACTAGAAGGCGGCAAAAATTATTTCTTGGTACCTCTCAAGAGGACCGTATATAAAATTTCTCTTTCATAGTACGTACTTGCTAATATACATGATGATTTTTTAGTAATTTCGTGGGTACGGAACTAATTTCGATGTGAAACATACTGTAAAAATTCGTGTGTTGCAAGTGTTAAAAGAACTTTTAAAACAGTAGATAACTGAGAGCTGATAAATATATTTTACCGATAAATCTATTACAAGACTAGTATCTACTTTAATAGTTCCTTACTCACTAGGTTTCAAAATTCTTAAATCCAGCATTGACATCGACTTGCCTTGCAAGTTGCAACGGATATTAAAAATATACCTTGCATTGACATAATTTGGAAGCATACATGAAAATTATGTCTTTTTGCACACAAATATATATTTATCTAACATACTCTCAGATTAATTGTTATATTTTAAACCGGAGAGAGTCATAAAATTGGATTGGACACTTAGTGATACTACCAAATACACAACATATAAAGAGATAATGGGACTGCCTATAGAATATGTGATAGAAAACGCTCTTCGAAATCATGCAAATTTTGGACCGTCCGATTGTGTGTCTTCCCCGTCTCCAGTAGCTCCCTACTGTCGGACCCGCCACCTCCTAACCAATCCTCCTGCCTCCCCCTCCCCCCTCTCCCCCCAAAACCACCACCACCGCCCTAGTACCACCCCTCTTCTAACCCTGCAACTTTGGTGGCACCATTGTAGCCTCGTTGCTCGCCGATCCACCGCCCATCACCAGCTACCGTCTCTCATGATCATCACTCTTAAGCCCAACTTTCCCCCTCTTCCCCTTCCACCCTGACCTCAACCCGAGATCCTAATCTATAGGTCCCTACCGAAGTTTAAGATGCTACCGATGCCAGAGAAGATGGGAAGATCACCGAGCTAATGGAAAATGATAGAAATATGAATCACAAAGTACATTAGATAGCTAAAATTTATAAGATTTGAAGGTAGATTTCATACCAAATAATTCTTAGCAATCCCGATAAATTAACCACAAGAAGTAGTCAAAACCGCTCTAACCTCACCATACACTTGTCAAAACTCAAAACCCTCCTCTGTGAGACTGACACTGCGGGCCCACTCTCTTCCACCAAAGCCCATCGTTATACTAGTGAGCTGAGCGAGCTCCTCCCCGACTCCCGAGACGCCCGCGCGCAACCAACGAATTTCCCGCGTCGCCTTGAACCACCTCGCGATCGCCGCCTCCGCCTCCGCCTCGATACCCATGGCCTCCGGCGAGCCTCGCCCGCCGTCACCCGCCGCCGTCGCCGTCGCCGTCCGCCCCGGTGGCAGCGCGAGCCGCCGCGCCGCGCGGTGGGCCGCCGCCAACCTCGTCCCCGCTGGAGACGGAGACGGCCGCGCCTCCGCCGCCGCCATTTCCGTCGTCCACGTCAT
More
|
||||||||||
| CDS seq | ATGACGTGGACGACGGAAATGGCGGCGGCGGAGGCGCGGCCGTCTCCGTCTCCAGCGGGGACGAGGTTGGCGGCGGCCCACCGCGCGGCGCGGCGGCTCGCGCTGCCACCGGGGCGGACGGCGACGGCGACGGCGGCGGGTGACGGCGGGCGAGGCTCGCCGGAGGCCATGGGTATCGAGGCGGAGGCGGAGGCGGCGATCGCGAGGTGGTTCAAGGCGACGCGGGAAATTCGTTGGTTGCGCGCGGGCGTCTCGGGAGTCGGGGAGGAGCTCGCTCAGCTCACTACTGAAGCAGGAGCGGATGCAGAGATGCAACAGATGTTCATCTCATACAGAGGCTATTGTGCTCGTAAAGGGATGCAATTGAAGGAAGTGATCTTGGATGGCAGTGACATCTCCAAAGCAATAGTCGAGTATGCCACTAGCAACGCCATCACCGACATCGTCGTCGGGGCGTCGACGAGGAACACATTCATCAGAAAGTTCAGAAATCCTGATGTGCCAACATGCTTGATGAAGATGGTGCCTGATTACTGCACAGTGCATGTCATCCACAAAGGGAAGGCAATCCAAGTCAAGGCAGCCAAAGCCCCAGCACCCTTTACCACTCTCCCTCCCAAACAGTACTCACAGTCAAGCATAGAATCTGATGGATATCCGAGATCAAGAGGAGACTGGAAGAAGATTTCCAATCAATCATCTCCAAAGGCAAACAGACCATCGGTGGACCGACTATCTGGCTTTGCAAAAGCTCCAACCAGGGAAAGGCCTCTCTCTGGAGCTAGATCAGCACCCCCAAAGGATTTCGACGACTATATCGACTTCATAGCTCCTCCAAGGCCCTCGGTAACCCGTAGCTCCTTTTCAGATGATGTTGATTTTCCTTTGAGCTTGGAGTTGCCATCGATGGACTTCGGCGATTCTTTGGAGCTTTCGCTTTCCGCATCAATGTCCATCGAAAGCCTAAGCTCAGCTGGGAAGGATGTCGAAACGGAAATGAGACGGCTGAGACTAGAGCTGAAGCAGACAATGGAAATGTACAACTCCGCATGCAAGGAAGCAATTGATGCTAAACAGAAGGCTGCTCAGATGCACCAGATGAAGATGGAAGAGTCCAAGAAGTACCAAGAACTCAGGAATGCTGAAGAGGAAGCCCTTGCTCTGGTCCAAATGGAGAAGGCAAAGTGCAGAGCCGCACTGGAAGCAGCAGAGGCTGCACAGAGAATTGCAGAGCTGGAGGCTCAGAAGAGACTGAGAGCAGAGTGGAAGGCGAAGCGCGAAGCCGAGGAGAGGAAGAGAGCAACAGAAGCAATGAACAACACTGATTTAAGGTACAGGAGGTATTCCATTGATGACATTGAAGCTGCCACCCATAAGTTTGACAAGGCACTCAAGATAGGGGAAGGTGGATATGGGCCGGTGTATAAAGCTGTCATGGATCATACTAATGTCGCCATTAAAATCTTAAGGCCAGATGCATCACAAGGGAGGAAACAGTTTCAGCAAGAGTACGGGTGCCTGGTGTACGAGTACATGGACTACGGCAGCCTGGAGGACCGGCTGTGCCGGCGGGGGAAGACGCTGCCGATCCCCTGGAACATCCGGTTCCGCATCGCCGCCGACATCGCCACCGGCCTCCTCTTCCTCCACCAGGCGAAGCCCGAGCCGCTGGTCCACCGCGACCTGAAGCCGGCCAACATCCTCCTCGACCACAACTTCGTCAGCAAGATCAGCGACGTCGGCCTCGCCCGCCTCGTCCCGCAGTCCGCTGCCGCCGCCGAGGCCACGCAGTACCGGATGACCTCGACGGCGGGCACCTTCTGCTACATCGACCCGGAGTACCAGCAGACCGGGATGCTGACCACCATGTCCGACATCTACTCGCTGGGGATCCTGCTGCTGCAGATCATCACGGCGAGGTCGCCCATGGGGCTCACCCACCACGTCGAGAGCGCCATCGAGAGGGGGACCTTCCAGGAGGTGCTCGACCCGATGGTGACCGACTGGCCGGTGGAGGAGGCCTTGGTGTTCGCCAAGCTGGCGCTGCGGTGCGCCGAGCTGAGGAAGAAGGACCGGCCGGACCTCGGGAAGGAGATCTTGCCGGAGCTCAACCGGCTGCGCTGCCTCAGCCAGGAGTACGACGCCTCCAAGGTCAGCAGCACCAGCACCACCTGCTCCAGCTCCGCTCCCTACAGCTTCGGCGGCGACGACGTCTCCACGCCATGA
More
|
||||||||||
| Protein seq | MTWTTEMAAAEARPSPSPAGTRLAAAHRAARRLALPPGRTATATAAGDGGRGSPEAMGIEAEAEAAIARWFKATREIRWLRAGVSGVGEELAQLTTEAGADAEMQQMFISYRGYCARKGMQLKEVILDGSDISKAIVEYATSNAITDIVVGASTRNTFIRKFRNPDVPTCLMKMVPDYCTVHVIHKGKAIQVKAAKAPAPFTTLPPKQYSQSSIESDGYPRSRGDWKKISNQSSPKANRPSVDRLSGFAKAPTRERPLSGARSAPPKDFDDYIDFIAPPRPSVTRSSFSDDVDFPLSLELPSMDFGDSLELSLSASMSIESLSSAGKDVETEMRRLRLELKQTMEMYNSACKEAIDAKQKAAQMHQMKMEESKKYQELRNAEEEALALVQMEKAKCRAALEAAEAAQRIAELEAQKRLRAEWKAKREAEERKRATEAMNNTDLRYRRYSIDDIEAATHKFDKALKIGEGGYGPVYKAVMDHTNVAIKILRPDASQGRKQFQQEYGCLVYEYMDYGSLEDRLCRRGKTLPIPWNIRFRIAADIATGLLFLHQAKPEPLVHRDLKPANILLDHNFVSKISDVGLARLVPQSAAAAEATQYRMTSTAGTFCYIDPEYQQTGMLTTMSDIYSLGILLLQIITARSPMGLTHHVESAIERGTFQEVLDPMVTDWPVEEALVFAKLALRCAELRKKDRPDLGKEILPELNRLRCLSQEYDASKVSSTSTTCSSSAPYSFGGDDVSTP |
||||||||||
| Function | U-box domain-containing protein 35 [UniProtKB/Swiss-Prot:Q9SW11] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_02g0009020 | OsAzu_02g0009020.01 | Chr02 | 6707315 | 6714381 | - | NAM | ||
| CDS seq | ATGACGTGGACGACGGAAATGGCGGCGGCGGAGGCGCGGCCGTCTCCGTCTCCAGCGGGGACGAGGTTGGCGGCGGCCCACCGCGCGGCGCGGCGGCTCGCGCTGCCACCGGGGCGGACGGCGACGGCGACGGCGGCGGGTGACGGCGGGCGAGGCTCGCCGGAGGCCATGGGTATCGAGGCGGAGGCGGAGGCGGCGATCGCGAGGTGGTTCAAGGCGACGCGGGAAATTCGTTGGTTGCGCGCGGGCGTCTCGGGAGTCGGGGAGGAGCTCGCTCAGCTCACTACTGAAGCAGGAGCGGATGCAGAGATGCAACAGATGTTCATCTCATACAGAGGCTATTGTGCTCGTAAAGGGATGCAATTGAAGGAAGTGATCTTGGATGGCAGTGACATCTCCAAAGCAATAGTCGAGTATGCCACTAGCAACGCCATCACCGACATCGTCGTCGGGGCGTCGACGAGGAACACATTCATCAGAAAGTTCAGAAATCCTGATGTGCCAACATGCTTGATGAAGATGGTGCCTGATTACTGCACAGTGCATGTCATCCACAAAGGGAAGGCAATCCAAGTCAAGGCAGCCAAAGCCCCAGCACCCTTTACCACTCTCCCTCCCAAACAGTACTCACAGTCAAGCATAGAATCTGATGGATATCCGAGATCAAGAGGAGACTGGAAGAAGATTTCCAATCAATCATCTCCAAAGGCAAACAGACCATCGGTGGACCGACTATCTGGCTTTGCAAAAGCTCCAACCAGGGAAAGGCCTCTCTCTGGAGCTAGATCAGCACCCCCAAAGGATTTCGACGACTATATCGACTTCATAGCTCCTCCAAGGCCCTCGGTAACCCGTAGCTCCTTTTCAGATGATGTTGATTTTCCTTTGAGCTTGGAGTTGCCATCGATGGACTTCGGCGATTCTTTGGAGCTTTCGCTTTCCGCATCAATGTCCATCGAAAGCCTAAGCTCAGCTGGGAAGGATGTCGAAACGGAAATGAGACGGCTGAGACTAGAGCTGAAGCAGACAATGGAAATGTACAACTCCGCATGCAAGGAAGCAATTGATGCTAAACAGAAGGCTGCTCAGATGCACCAGATGAAGATGGAAGAGTCCAAGAAGTACCAAGAACTCAGGAATGCTGAAGAGGAAGCCCTTGCTCTGGTCCAAATGGAGAAGGCAAAGTGCAGAGCCGCACTGGAAGCAGCAGAGGCTGCACAGAGAATTGCAGAGCTGGAGGCTCAGAAGAGACTGAGAGCAGAGTGGAAGGCGAAGCGCGAAGCCGAGGAGAGGAAGAGAGCAACAGAAGCAATGAACAACACTGATTTAAGGTACAGGAGGTATTCCATTGATGACATTGAAGCTGCCACCCATAAGTTTGACAAGGCACTCAAGATAGGGGAAGGTGGATATGGGCCGGTGTATAAAGCTGTCATGGATCATACTAATGTCGCCATTAAAATCTTAAGGCCAGATGCATCACAAGGGAGGAAACAGTTTCAGCAAGAGTACGGGTGCCTGGTGTACGAGTACATGGACTACGGCAGCCTGGAGGACCGGCTGTGCCGGCGGGGGAAGACGCTGCCGATCCCCTGGAACATCCGGTTCCGCATCGCCGCCGACATCGCCACCGGCCTCCTCTTCCTCCACCAGGCGAAGCCCGAGCCGCTGGTCCACCGCGACCTGAAGCCGGCCAACATCCTCCTCGACCACAACTTCGTCAGCAAGATCAGCGACGTCGGCCTCGCCCGCCTCGTCCCGCAGTCCGCTGCCGCCGCCGAGGCCACGCAGTACCGGATGACCTCGACGGCGGGCACCTTCTGCTACATCGACCCGGAGTACCAGCAGACCGGGATGCTGACCACCATGTCCGACATCTACTCGCTGGGGATCCTGCTGCTGCAGATCATCACGGCGAGGTCGCCCATGGGGCTCACCCACCACGTCGAGAGCGCCATCGAGAGGGGGACCTTCCAGGAGGTGCTCGACCCGATGGTGACCGACTGGCCGGTGGAGGAGGCCTTGGTGTTCGCCAAGCTGGCGCTGCGGTGCGCCGAGCTGAGGAAGAAGGACCGGCCGGACCTCGGGAAGGAGATCTTGCCGGAGCTCAACCGGCTGCGCTGCCTCAGCCAGGAGTACGACGCCTCCAAGGTCAGCAGCACCAGCACCACCTGCTCCAGCTCCGCTCCCTACAGCTTCGGCGGCGACGACGTCTCCACGCCATGA
More
|
|||||||
| Protein seq | MTWTTEMAAAEARPSPSPAGTRLAAAHRAARRLALPPGRTATATAAGDGGRGSPEAMGIEAEAEAAIARWFKATREIRWLRAGVSGVGEELAQLTTEAGADAEMQQMFISYRGYCARKGMQLKEVILDGSDISKAIVEYATSNAITDIVVGASTRNTFIRKFRNPDVPTCLMKMVPDYCTVHVIHKGKAIQVKAAKAPAPFTTLPPKQYSQSSIESDGYPRSRGDWKKISNQSSPKANRPSVDRLSGFAKAPTRERPLSGARSAPPKDFDDYIDFIAPPRPSVTRSSFSDDVDFPLSLELPSMDFGDSLELSLSASMSIESLSSAGKDVETEMRRLRLELKQTMEMYNSACKEAIDAKQKAAQMHQMKMEESKKYQELRNAEEEALALVQMEKAKCRAALEAAEAAQRIAELEAQKRLRAEWKAKREAEERKRATEAMNNTDLRYRRYSIDDIEAATHKFDKALKIGEGGYGPVYKAVMDHTNVAIKILRPDASQGRKQFQQEYGCLVYEYMDYGSLEDRLCRRGKTLPIPWNIRFRIAADIATGLLFLHQAKPEPLVHRDLKPANILLDHNFVSKISDVGLARLVPQSAAAAEATQYRMTSTAGTFCYIDPEYQQTGMLTTMSDIYSLGILLLQIITARSPMGLTHHVESAIERGTFQEVLDPMVTDWPVEEALVFAKLALRCAELRKKDRPDLGKEILPELNRLRCLSQEYDASKVSSTSTTCSSSAPYSFGGDDVSTP
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_02g0009020 | OsAzu_02g0009020.02 | Chr02 | 6707419 | 6711840 | - | IsoSeq | ||
| CDS seq | AAGAGGGAAGAAGAGGGAGAGGAGGAGAAGCAAAAGAATCCTTTTTTTTTTTTTTGTCTCTTCCTCTCCTTCTCCGACTCCGACGATCTTTTTGCCGGCGAGGTGCGGGGAGCATGTACCTGTCGGCCTTCTCCTCCTCGGCGTCTTCGCACGGCGGCGGGGACAGCGAGGCCAGGGACAGCTCCACGGTGGTCGCCGTCGACCGGGACAAGAACAGCCAGCAGGCGGTCAAGTGGGCGGTGGACCGGCTCCTCGCCAGGGGCAGCGTTCTCCAGCTCGTCCATGTCAAGCCACAGCAAAATGCTGAAGCAGGAGCGGATGCAGAGATGCAACAGATGTTCATCTCATACAGAGGCTATTGTGCTCGTAAAGGGATGC
More
|
|||||||
| Protein seq | KREEEGEEEKQKNPFFFFCLFLSFSDSDDLFAGEVRGACTCRPSPPRRLRTAAGTARPGTAPRWSPSTGTRTASRRSSGRWTGSSPGAAFSSSSMSSHSKMLKQERMQRCNRCSSHTEAIVLVKGC |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr02 | 6708421 | 6709184 | - | OsAzu_02g0009020.02 | OsAzu_02g0009020.01,OsAzu_02g0009020.02 | All |
| AF | Chr02 | 6711055 | 6714381 | - | OsAzu_02g0009020.02 | OsAzu_02g0009020.01,OsAzu_02g0009020.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.091893 | 0.000000 | 4.275642 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0218400 | RBH | 0.585358 | 0.085603 | 3.763386 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g12660 | RBH | 0.619342 | 0.382108 | 0.950125 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0218400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0020280 | SBH | 0.291060 | 1.788165 | 2.376254 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0009110 | RBH | 0.037356 | 0.0 | 5.285417 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0008930 | RBH | 0.000000 | 0.0 | 8.696533 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0008770 | RBH | 0.136219 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0008910 | RBH | 4.163383 | 0.000000 | 9.755577 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0111800 | RBH | 2.320686 | 3.8051245 | 3.9955205 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0008740 | RBH | 0.205231 | 0.000000 | 4.516614 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0115100 | RBH | 2.427768 | 5.002733 | 5.909601 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0009190 | RBH | 0.000000 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0008830 | RBH | 0.072815 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0009140 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0009120 | RBH | 0.337171 | 0.190601 | 1.150869 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0008870 | RBH | 0.307069 | 1.242937 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G009020 | RBH | 0.000000 | 0.000000 | 2.307817 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0008900 | RBH | 0.256103 | 2.991962 | 11.806407 |
