Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_02g0006820 | OGI:02015080 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr02:5088087-5096350 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATTGATGAGAGGCAGAAGCCAAGAACAAACAGCACCCTAAAAAAGAAGCCTATCAAAGAATTTAAGGCCGCGGAGAAAGATATTGAATTCTTTACCCACACTCGCCGCATCCAAATCTCCTCCTGGAGGAAGCAATCCGGTGTTCTCTCCTTTTCCTCCTCTTTATCTTACTAGTAGTAGCTGTTTTGCTCCCTGCACATTAGCTGTCCATTGGCAGCGGCGGCGGCCATGGCGATCCGCGTGGCCGTTTCCTAGCCAAGAAGGCAAGAAGCAACCGAGAAAGGCCTACAAAGTTTGCGTTCTTGAGAGAAAGAGGGTGGAAGCTAGTAGGTGTTAGTGGGAGGGAGGGGCCAAGAATGGCGGCGCTGGCCGCCGCATTGGTTGGGTTTCTTCTTGCTGTCTCGTCGGCGCCGGCGGGAGCCACCACCGACGCCTCCGACGGTGAGCTGCGGCCCACGATTCATGGGGTTCTTGGTTTTCTTGGAATGTTCAGGAAATCTTGTTTTCTTTTTCCTTTGATGGTTGGGGTGTTGTTGCAGCTGCGGCGCTTGGGAATCTGTATTCGTCGTGGAACAGCCCGTCGCAGCTGGCTGGGTGGTCGGCCGGCGGCGGCGGCGACCCTTGCGGCGCGGGGTGGCAGGGGATCTCCTGCTCCGGCGCTGGCGTCACCGAAATGTAAAGATCCCGTGATGCGACAGCGAAGCTTTCATTGGCTTTTTTTTATTGGATTTGATGAGTTCTTTCATTGGCTGGTGTTTGATTCTTACTGCATTCTAAATTTCTGACTCTCTGCAAGCTGAATAAAAACAAATGTGCATTTGGGAATCGAATCACAATATCACATTGTGCACCATCTTCATTGATGGCAGATAGTTTAGGATTGCCAAAATCTTCTAACAGGATTAATGAAAAGAGGGGAATTAAACTCCTTTTTTGGATCCATCTATGGAATGTGACTACATCGCACTAACCAACTTCACTACATTCATGGCAGTTCTGTTTTCATTGGTGTCTCAACTCCTCTTACCAAGTTTGTTGGAAATTCAGTGGGAAAAAAACTTCATTTTGGAACATACATCATCTTTTGTTTAGTTTTATTTACTTTTGTTACTATAAGAAGCTACTCAACACTGACTTGCTCTCGTATTCTTCTTCCATTGTATAGTAGGCTTGCTGGGGTAGGACTGGATGGCTCTCTGGGATATGAACTCTCCAGTCTATTCTCATTGAAGACATTGTGAGAGCTCAAAACTTGGTTATACTCTTCATTTTTTTTTATGCATTGTTTTGATCTCCCGTTTCGTTACTTGCAGAGATTTGAGCAACAACAACTTGCATGGTTCAATTCCTTACCAGCTGCCACCGAATCTCACATATCTGTATGTAATGTACCCCACCTATTATAATCTGTTACGCAGCAATAAGTATAGGGTGTTTTATTCTAAATGATGACACAGGAATCTGGCAACCAACAACTTATCTGGCAACCTTCCGTACTCTATATCCAACATGGTTTCATTAGAGTACCTGTAAGCTTCTGTCCATCACTACTTTGCTGTCTTTTGTATCAACAAGTATTAATGTAACATCGTTAATGCAGCAATGTCAGCCACAACTCACTGTCTCAACAGATAGGTGATTTATTTGGAAGTCTCAATTCACTTTCAGAGCTGTAAGTCATCTTATTTAGATTTTGTGTGATTACACAGTGTTTCTATTTACGGTCAAGAGACATTCTTCTGCAACATGGCATATATCTTTTGGCAACAATTCAATTCAAATTTTATTCTTAAAATGGCCTCATATAAACTTCCATAAAATACCTTTTTGCTTCATGGTCCATAGCAGAAGTTAGTCCTAAGAGGTAGAAATTCAGTAGCAGTTCTGTTTGTAGTGATTAAATCCAGGCATGCCATCTTCTTGTCCATTTTGGTTCTTGTCATTTTATTATTCCATAACATTGATGCCCATACAATAAATGCTTTGAGTATTTCCCTCCAATTCGTTAGTACTGTTACGTGACCTTTATTATTATTTTGAGACTTGATTCTTGGTAGTAGTACCAGGGGACACTATCAACCACCTAGTGCAAAGCTAAGCAACCCTTCCAACAGTTGAGTATGAACTTAGAAATCTTCTATTATATACTAAAAGTCCATTAAACTTCCTATAAACGCTCTCAAGCCGCCACGTCGTCTCCTACAAACGCTCCTAAACCGCCATATGGCATTTTAATTTAATAAAAAAATCAAATAAATATCTAACCATTGATTTTCCTTTAAATCGGTGGACCCATTAATTTTAACCATTAGATCTACATCTAAAAGGAAAAAGGAAAAAAGTGGTATCCCCACCTCCATTGCGTACGTACGTGCTCCCTCCCACCCTCCTACTCTCCCCTTCTCTCCTATCTTTTAGCTAATTTATCCTATTTTCTAACTAACACTCCATATATTAAAAAATAATTTGGACATCTAAATGATCATAACTCTCAAGTTACATATTTTTCTTTTTTCTTTTCAATTGTTGAGTTATTTATAATTAAATACATAATTCAAAATTCATATTGCTCATATTTTATTATTTAAAATTTAGATCATGTGACCGTTCTAACTATGTGGTATGCCTATAAATGCTCTTAAGTCATTATAAGGAACTCTAATAAATTAAAAATTCAATAAATATGTGCAATAAAACATCTAACTATCGATTTCCACTTAAATTGATGGACCCACTATCTTATATGGTTAGATCTATCTTTTAAAAAAATCGCAAACCAACCTTCTTCCCTCACCCATCCTCCTATTTCTCTCTCCTTGCCATTCCTTCTTTGTTTTTTTCACTCCACGCAATGACTAAAATAAAAATTATCTTTACCCAAAAAAATCTCAAAAATGGACCTCTACCTAACACATGTAGCTGGCTCTCCCTCTATCACATGATTTTCTTCTCTTTCTCCTCTATCTAGCACTTATAGAAGCAGCATAAATTGGACTTTAAAATAATCATAATTTCTTAAATTATATATAATTTACAATATGTATAAACTACTGTAATTTTTAATTAAATCAATAATATAATATGCGTATTGACTTACCTTGTGGAACATATCCACCTTGAGGCCTCCACTAAATAAAATAAAATAAAAATTTCTCATTAGAAATTCAAATATCCCACCTTATTTTTTTTAATAAACCAGTAAACCTATTATTTATTATACCCTGCTAGACATCTAATGTCTTTCTACCGACTACTTCCGTTTTGAATATATTATAAAAAACAAATATATTATAAAAAACATATTCAATTTTAAATTTACTAAAAGTAATTTGGTGTTGTAATTATTGATATATTTTTCCAAAAAAGAGGAAGTAATTAATTTCTCTTAATAGGCAAATAGGGGCTATTTACTTGTACTTGATTTTAGATGCGCTTTTGTGAATAAATTATCTTATACGAGATAAATAAATGTTCCTAGGATGATCATAGCATATAAATTATACATATGATATATGGTGTCACTAATAGATTAGAGAAAAAGCTTTTGATTATATCATTTTTTTAGTCGTAACGTGTACCCCGTGTAGGGTCTATTTGTCATATATAGATAACAGATTGAAAATAACCAACATGGTGCGTTGAGCATCATATAAGATCGTAGCAAGCACATGGTTTGTGCCAAGGAATTATAGCAGTGAAACAACCATATATATCAAATCAATTCTATATGGAAATTAAAGACCATGTATATTTATATATTTATTTATTTGGTAAATCCAGAAACACTCCAGTTTAGTGGTACCATTACTTAATTCTTAATTGGAGAGAGAAATTTAGAAAGGATGCCATTACCCCATGCCAAGTTGTACCACCTTAACCCATTTATATTTTCATTCCAAATTGCAGAGATCAAAACATTTAAGAGATACTTGACGGAATGGAAATCTAGAAAAAAAAATTAAAATAACATGAAATAAAATTGAAAACTGAACATTTATTTTTTTCTAAATCTAACATTTTTTTCGAATTTGAAACCCATTCTAAATAGCAAAGTCATATATGTCATTTATGAATATTTTTTAAGGATATTAACATATATAGTATACAAGAAAAATGTTACTCTGCAAAAATAAAATATACTAAATATTAAAAAAGAAATGCATTGTGTACAAATGATATTATAGTTTCATAGGAAACAATTTCACTGTGACACAATAGTTTCTTATAAATTTAAAACTACAATGGTTTTAAGTAATTTTAGTTTAGAATTCATATACTACAGTGGTAATTAGAAAAAGAAATACTAGCACTCAAAGAAACCCCAAGCAAATTATTCAAAAAACATGTTTATAATAGAGTAATCGTAAAAATTCGTAATAAAATTTCAAACACATTAAATAAGATGCCCGCGCATGTGTGCGGGCTACCTTCCTAGTTACAATGAATGTTGTAAAACTTGCTGTTATGTTTTGACATGCAGTTATACCCTTTGCACGTTTATGGTAATAAGATTTACCTTCTACTCCCTCCGTTTCACAATGTAAGACTTTCTAGCATTGCCCACATTCATATAGAAGCTAATGAATAATATCTAGATTCATTAGCATCTATATGAATGTGGGCAATGCTAGAAAGTCTTACATTGTGAAACGGAGGAAGTACTTTATACTAACACACATGCTCTTCCCTTGGTCTCATGAATTCATCTGATACTGTTTACATTCCTTGGCAGAGATGTATCTTTCAACAAATTGACAGGGGATCTTCCCAATTCTCTTGGCTCTCTTTCAAATCTTTCTAGTCTGTGAGTATCTTGTAATTTTCATGTAAACCCCAATTTAAACATTTTTTAAAAACTTTCTAATGCTTGATATAAAATTCTCCATTTTGCAGTTATATGCAAAACAATCAATTAACAGGTTCTGTCAATGTTCTCAGTGGTCTAAGCCTCACAACACTGTAAGCGAGTTTTTCAGACAACAAATTGACTGCTATGCTGCTTGCTTAATAACTGAGATTTCCTTCTCTTCAAACAGAAATATTGCAAACAACAATTTCAATGGCTGGATACCACAAGAATTCAGTTCAATCCCAGATCTGACGTATGAGATACTTTTACTGCCCTTTCTCTTTGGAAATCATCTTTGACACACTCTAATGACCTGTTGCAATTACAACCATAGACTTGGAGGAAACTCATTCACAAATGGACCTGCTCCACCACCACCACCTTTTATGCCACCACCCCCTAGAAGACCACGTAATCGGCCCAGCCATCCTCGGGGAAGTGGAGATGCTCCAGAAGGCTCAGTAAGCCCAGCTGGTCAAGGTGACAAGAAGCAAGGTCTTCAGACAGGCCCGCTTGTCGGGATAGTTGCTGGCTCAACAGTTGGTGCCTTATGTGCACTTCTTCTTTTGGTATTCTGCATTCGCAATGCTCAGAAAAGAAAGGATGATACCAGCAGCAATTCAAAAGATTTTGTAGGTCCACTATCAGTAAACATAGAGAGAGGTATTACACTTGTTCATATGCTGTCATGATTTCTTATTGCAATATTTTTCTTATCTTTAATAATATATAATTTCAGTTAGCTGAGACAATCCTTAGTTGAAAGGATAACCATATGCTTTCCCTATAAAATAAGATATCCTTGAATTTTGGTTGATCTATAAAATGATAAATCATGTATATTTGAGACCCCACTTTTAGTATATTTCAAGTCAGGCATTTGCATGAGACCAGCTTAGTTTGTCAATTTAGTTAGGGGCAGCTAAAACTCGAAGTCTTGGATCATATGTACTTGATAGATCTATATGGAATTCTGATGATTTTACCTTTGCTCTGAAAATACAATCAAAACTAATAACTGTTTTACATCATTAACTTACAGCGTGTAACGGAATGCACTTGTGTTGCTCATAATACATATTTCCACCCTTCTCTTCTGTAGCTTCTAACAGGGAAATCCCAGAGCAGAGTCCTGAGAATACTTCTGTAGCAACTATGAAGATCTCACCTGCTGAGAAAATGACTCCAGAGAGGATTTATGGTAAAACTGGTTCTATGAGAAAGACAAAGGTCCCAATCACTGCAACGCCTTATACTGTTGCTTCCCTCCAAGTTGCCACTAATAGCTTCTGTCAAGATTCCCTTCTAGGAGAGGGCTCACTTGGTCGTGTTTACAAGGCCGATTTCCCCAATGGAAAGGTAAAATATGCATCTTATATTAAATGAATGTTGCATGAAGTGGAATGTAAACCATAACCTTATAATTTAGTCAGTGGATGAATCAGCTGTGCAACACTGTTATACATACAGCCAAACCCCGATGGTTTTTAGCCTGTTTACTCCTATAGGCAGTAAAACTAAAAATATTTGAAATTTTTTCACCCTCTTATTATTTTTGTGTCATGCTATGCACTGCGACTGAGTTGCGTGCTGTGATTGCAGGTTCTTGCAGTTAAGAAGATAGATAGTTCAGCCCTTTCCTTGCAGGAAGAAGACAATTTTCTTGAGGCTGTATCGAGCATGTCACGGCTAAGGCATCCAAACATTGTGCCACTTACAGGGTATTGTGTTGAGCATGGGCAAAGGCTTCTTGTTTATGAGTACATTGGAAATGGAACACTGCATGATGTGCTGCACTACTCTGATGAGTTGAGCAGGAAGCTTACATGGAACATCCGTGTAAGGGTAGCCCTAGGGACTGCTCGGGCGCTAGAGTAAGTTTTATGAATCATACATCATTTTTTGTTCACCTTTTCTGATGTTTTACAGCAGCAGGGGCACTTCTAACGTCTTTCAAACCTTCTCCCAGGTACCTGCATGAGGTGTGCTTGCCATCTGTTGTGCATAGAAACTTTAAGTCCTCAAACATCCTACTCGATGAAGAGCATAATCCACATTTATCTGACTGTGGGCTTGCCGCCTTGACACCCAACACGGAGAGACAGGTCAGTCATACCACCACATTTCTAAACTTCTGGTTGCTAAAGTTCTCAGATGGCCTTGTTTGGCTCCTGTAGAAGTAGTTAATTAATGGACTGAATATGCTTGGTTTGCCATTCCAGGTTTCAACTGAGGTGTTTGGCTCATTTGGATACAGTGCCCCGGAGTTTGCCATGTCAGGAATTTATACCGTAAAGAGTGATGTGTACAGTTTTGGAGTTGTGATGTTAGAGCTATTGACAGGGCGGAAACCACTAGACAGGTATGCTTCTAGTTTATATTCAAATCCCGGTGCATTGCGTTTTATAAATTGAAAATGACCTTCTGATGGATATTGCAGTTCTAGAGAGAGATCAGAACAATCTCTTGTTCGATGGGCTACTCCACAGCTTCATGATATCGATGCGCTTGCTAAGATGGTGGATCCAGCATTAAATGGAATGTACCCTGCTAAATCGCTCTCCCGTTTTGCGGACATAATCGCGCTGTGTGTTCAGGTATGTTCATGCGTTTGCATTGTGATAGATCTTTAGACATTGATATAGGTACATAGTAATCAGTGAGCACACATGGAGACCTTCATGAAATCCAAAATGGAATGTAACATAAGCTTTCTTGCTGAGTTTGGTAGGATTCTTGTAGTCTGACACCGACCACATTGTTAGTATCTGGATGTTGGGCATCTTAGTTTGATTTCTTGTAATATCCTCTGCCAGGAGCATATTCTAAGAACATCTTTTGTGATTTTTTTTTTTTTTTGCGCAGCCTGAGCCCGAGTTTCGCCCTCCTATGTCTGAGGTAGTTCAGCAACTTGTTCGCCTGATGCAAAGGGCCAGCATAGTGAGGCGACAATCTGGAGAAGAATTGGGATATTCATACAGAGCCCCTGAACGCGAAGGCGACATGAGAGACCTTTCCTTCTGAGAAGTTCCTTCCATGGTACAAGGCGAAAAAAAACAGTTTGGAGGCTCAGTTACAAGAACTTTGGACTACTCATATGATGAAGATGAACTGGTGAACGCGAGTTGATCACACGATTCATGGTCGAACGGATTTGAGAAGATAATTTTGGTACTTCATTGTTCAAATTTTGTTCATTCTTCTCCCCCTTTCTTTTTTTCATTTTTTGTTTCCCAGTCATTGTTCTTCAGGCCTAAATCAATGGCATATGTATAGCATGTTGGTCACTGATTCACAGGTAGAGAAAAAGATGGAAAAGAGATTTAACCTTGAGCTCATGCTCAACTGTGTTAATTCATACCAAGTGTTATTAATGATGATTGCTTCAAAGCTCTTACACCTTACTACTACAACC
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| CDS seq | ATGGCGGCGCTGGCCGCCGCATTGGTTGGGTTTCTTCTTGCTGTCTCGTCGGCGCCGGCGGGAGCCACCACCGACGCCTCCGACGCTGCGGCGCTTGGGAATCTGTATTCGTCGTGGAACAGCCCGTCGCAGCTGGCTGGGTGGTCGGCCGGCGGCGGCGGCGACCCTTGCGGCGCGGGGTGGCAGGGGATCTCCTGCTCCGGCGCTGGCGTCACCGAAATTAGGCTTGCTGGGGTAGGACTGGATGGCTCTCTGGGATATGAACTCTCCAGTCTATTCTCATTGAAGACATTAGATTTGAGCAACAACAACTTGCATGGTTCAATTCCTTACCAGCTGCCACCGAATCTCACATATCTGAATCTGGCAACCAACAACTTATCTGGCAACCTTCCGTACTCTATATCCAACATGGTTTCATTAGAGTACCTCAATGTCAGCCACAACTCACTGTCTCAACAGATAGGTGATTTATTTGGAAGTCTCAATTCACTTTCAGAGCTTTATATGCAAAACAATCAATTAACAGGTTCTGTCAATGTTCTCAGTGGTCTAAGCCTCACAACACTAAATATTGCAAACAACAATTTCAATGGCTGGATACCACAAGAATTCAGTTCAATCCCAGATCTGACACTTGGAGGAAACTCATTCACAAATGGACCTGCTCCACCACCACCACCTTTTATGCCACCACCCCCTAGAAGACCACGTAATCGGCCCAGCCATCCTCGGGGAAGTGGAGATGCTCCAGAAGGCTCAGTAAGCCCAGCTGGTCAAGGTGACAAGAAGCAAGGTCTTCAGACAGGCCCGCTTGTCGGGATAGTTGCTGGCTCAACAGTTGGTGCCTTATGTGCACTTCTTCTTTTGGTATTCTGCATTCGCAATGCTCAGAAAAGAAAGGATGATACCAGCAGCAATTCAAAAGATTTTGTAGGTCCACTATCAGTAAACATAGAGAGAGCTTCTAACAGGGAAATCCCAGAGCAGAGTCCTGAGAATACTTCTGTAGCAACTATGAAGATCTCACCTGCTGAGAAAATGACTCCAGAGAGGATTTATGGTAAAACTGGTTCTATGAGAAAGACAAAGGTCCCAATCACTGCAACGCCTTATACTGTTGCTTCCCTCCAAGTTGCCACTAATAGCTTCTGTCAAGATTCCCTTCTAGGAGAGGGCTCACTTGGTCGTGTTTACAAGGCCGATTTCCCCAATGGAAAGGTTCTTGCAGTTAAGAAGATAGATAGTTCAGCCCTTTCCTTGCAGGAAGAAGACAATTTTCTTGAGGCTGTATCGAGCATGTCACGGCTAAGGCATCCAAACATTGTGCCACTTACAGGGTATTGTGTTGAGCATGGGCAAAGGCTTCTTGTTTATGAGTACATTGGAAATGGAACACTGCATGATGTGCTGCACTACTCTGATGAGTTGAGCAGGAAGCTTACATGGAACATCCGTGTAAGGGTAGCCCTAGGGACTGCTCGGGCGCTAGAGTACCTGCATGAGGTGTGCTTGCCATCTGTTGTGCATAGAAACTTTAAGTCCTCAAACATCCTACTCGATGAAGAGCATAATCCACATTTATCTGACTGTGGGCTTGCCGCCTTGACACCCAACACGGAGAGACAGGTTTCAACTGAGGTGTTTGGCTCATTTGGATACAGTGCCCCGGAGTTTGCCATGTCAGGAATTTATACCGTAAAGAGTGATGTGTACAGTTTTGGAGTTGTGATGTTAGAGCTATTGACAGGGCGGAAACCACTAGACAGTTCTAGAGAGAGATCAGAACAATCTCTTGTTCGATGGGCTACTCCACAGCTTCATGATATCGATGCGCTTGCTAAGATGGTGGATCCAGCATTAAATGGAATGTACCCTGCTAAATCGCTCTCCCGTTTTGCGGACATAATCGCGCTGTGTGTTCAGCCTGAGCCCGAGTTTCGCCCTCCTATGTCTGAGGTAGTTCAGCAACTTGTTCGCCTGATGCAAAGGGCCAGCATAGTGAGGCGACAATCTGGAGAAGAATTGGGATATTCATACAGAGCCCCTGAACGCGAAGGCGACATGAGAGACCTTTCCTTCTGA
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| Protein seq | MAALAAALVGFLLAVSSAPAGATTDASDAAALGNLYSSWNSPSQLAGWSAGGGGDPCGAGWQGISCSGAGVTEIRLAGVGLDGSLGYELSSLFSLKTLDLSNNNLHGSIPYQLPPNLTYLNLATNNLSGNLPYSISNMVSLEYLNVSHNSLSQQIGDLFGSLNSLSELYMQNNQLTGSVNVLSGLSLTTLNIANNNFNGWIPQEFSSIPDLTLGGNSFTNGPAPPPPPFMPPPPRRPRNRPSHPRGSGDAPEGSVSPAGQGDKKQGLQTGPLVGIVAGSTVGALCALLLLVFCIRNAQKRKDDTSSNSKDFVGPLSVNIERASNREIPEQSPENTSVATMKISPAEKMTPERIYGKTGSMRKTKVPITATPYTVASLQVATNSFCQDSLLGEGSLGRVYKADFPNGKVLAVKKIDSSALSLQEEDNFLEAVSSMSRLRHPNIVPLTGYCVEHGQRLLVYEYIGNGTLHDVLHYSDELSRKLTWNIRVRVALGTARALEYLHEVCLPSVVHRNFKSSNILLDEEHNPHLSDCGLAALTPNTERQVSTEVFGSFGYSAPEFAMSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRERSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQQLVRLMQRASIVRRQSGEELGYSYRAPEREGDMRDLSF |
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| Function | Protein STRUBBELIG-RECEPTOR FAMILY 8 [UniProtKB/Swiss-Prot:Q6R2J8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_02g0006820 | OsAzu_02g0006820.01 | Chr02 | 5088087 | 5096350 | + | NAM | ||
| CDS seq | ATGGCGGCGCTGGCCGCCGCATTGGTTGGGTTTCTTCTTGCTGTCTCGTCGGCGCCGGCGGGAGCCACCACCGACGCCTCCGACGCTGCGGCGCTTGGGAATCTGTATTCGTCGTGGAACAGCCCGTCGCAGCTGGCTGGGTGGTCGGCCGGCGGCGGCGGCGACCCTTGCGGCGCGGGGTGGCAGGGGATCTCCTGCTCCGGCGCTGGCGTCACCGAAATTAGGCTTGCTGGGGTAGGACTGGATGGCTCTCTGGGATATGAACTCTCCAGTCTATTCTCATTGAAGACATTAGATTTGAGCAACAACAACTTGCATGGTTCAATTCCTTACCAGCTGCCACCGAATCTCACATATCTGAATCTGGCAACCAACAACTTATCTGGCAACCTTCCGTACTCTATATCCAACATGGTTTCATTAGAGTACCTCAATGTCAGCCACAACTCACTGTCTCAACAGATAGGTGATTTATTTGGAAGTCTCAATTCACTTTCAGAGCTTTATATGCAAAACAATCAATTAACAGGTTCTGTCAATGTTCTCAGTGGTCTAAGCCTCACAACACTAAATATTGCAAACAACAATTTCAATGGCTGGATACCACAAGAATTCAGTTCAATCCCAGATCTGACACTTGGAGGAAACTCATTCACAAATGGACCTGCTCCACCACCACCACCTTTTATGCCACCACCCCCTAGAAGACCACGTAATCGGCCCAGCCATCCTCGGGGAAGTGGAGATGCTCCAGAAGGCTCAGTAAGCCCAGCTGGTCAAGGTGACAAGAAGCAAGGTCTTCAGACAGGCCCGCTTGTCGGGATAGTTGCTGGCTCAACAGTTGGTGCCTTATGTGCACTTCTTCTTTTGGTATTCTGCATTCGCAATGCTCAGAAAAGAAAGGATGATACCAGCAGCAATTCAAAAGATTTTGTAGGTCCACTATCAGTAAACATAGAGAGAGCTTCTAACAGGGAAATCCCAGAGCAGAGTCCTGAGAATACTTCTGTAGCAACTATGAAGATCTCACCTGCTGAGAAAATGACTCCAGAGAGGATTTATGGTAAAACTGGTTCTATGAGAAAGACAAAGGTCCCAATCACTGCAACGCCTTATACTGTTGCTTCCCTCCAAGTTGCCACTAATAGCTTCTGTCAAGATTCCCTTCTAGGAGAGGGCTCACTTGGTCGTGTTTACAAGGCCGATTTCCCCAATGGAAAGGTTCTTGCAGTTAAGAAGATAGATAGTTCAGCCCTTTCCTTGCAGGAAGAAGACAATTTTCTTGAGGCTGTATCGAGCATGTCACGGCTAAGGCATCCAAACATTGTGCCACTTACAGGGTATTGTGTTGAGCATGGGCAAAGGCTTCTTGTTTATGAGTACATTGGAAATGGAACACTGCATGATGTGCTGCACTACTCTGATGAGTTGAGCAGGAAGCTTACATGGAACATCCGTGTAAGGGTAGCCCTAGGGACTGCTCGGGCGCTAGAGTACCTGCATGAGGTGTGCTTGCCATCTGTTGTGCATAGAAACTTTAAGTCCTCAAACATCCTACTCGATGAAGAGCATAATCCACATTTATCTGACTGTGGGCTTGCCGCCTTGACACCCAACACGGAGAGACAGGTTTCAACTGAGGTGTTTGGCTCATTTGGATACAGTGCCCCGGAGTTTGCCATGTCAGGAATTTATACCGTAAAGAGTGATGTGTACAGTTTTGGAGTTGTGATGTTAGAGCTATTGACAGGGCGGAAACCACTAGACAGTTCTAGAGAGAGATCAGAACAATCTCTTGTTCGATGGGCTACTCCACAGCTTCATGATATCGATGCGCTTGCTAAGATGGTGGATCCAGCATTAAATGGAATGTACCCTGCTAAATCGCTCTCCCGTTTTGCGGACATAATCGCGCTGTGTGTTCAGCCTGAGCCCGAGTTTCGCCCTCCTATGTCTGAGGTAGTTCAGCAACTTGTTCGCCTGATGCAAAGGGCCAGCATAGTGAGGCGACAATCTGGAGAAGAATTGGGATATTCATACAGAGCCCCTGAACGCGAAGGCGACATGAGAGACCTTTCCTTCTGA
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| Protein seq | MAALAAALVGFLLAVSSAPAGATTDASDAAALGNLYSSWNSPSQLAGWSAGGGGDPCGAGWQGISCSGAGVTEIRLAGVGLDGSLGYELSSLFSLKTLDLSNNNLHGSIPYQLPPNLTYLNLATNNLSGNLPYSISNMVSLEYLNVSHNSLSQQIGDLFGSLNSLSELYMQNNQLTGSVNVLSGLSLTTLNIANNNFNGWIPQEFSSIPDLTLGGNSFTNGPAPPPPPFMPPPPRRPRNRPSHPRGSGDAPEGSVSPAGQGDKKQGLQTGPLVGIVAGSTVGALCALLLLVFCIRNAQKRKDDTSSNSKDFVGPLSVNIERASNREIPEQSPENTSVATMKISPAEKMTPERIYGKTGSMRKTKVPITATPYTVASLQVATNSFCQDSLLGEGSLGRVYKADFPNGKVLAVKKIDSSALSLQEEDNFLEAVSSMSRLRHPNIVPLTGYCVEHGQRLLVYEYIGNGTLHDVLHYSDELSRKLTWNIRVRVALGTARALEYLHEVCLPSVVHRNFKSSNILLDEEHNPHLSDCGLAALTPNTERQVSTEVFGSFGYSAPEFAMSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRERSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQQLVRLMQRASIVRRQSGEELGYSYRAPEREGDMRDLSF
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_02g0006820 | OsAzu_02g0006820.02 | Chr02 | 5088090 | 5096307 | + | IsoSeq | ||
| CDS seq | GATGAGAGGCAGAAGCCAAGAACAAACAGCACCCTAAAAAAGAAGCCTATCAAAGAATTTAAGGCCGCGGAGAAAGATATTGAATTCTTTACCCACACTCGCCGCATCCAAATCTCCTCCTGGAGGAAGCAATCCGGTGTTCTCTCCTTTTCCTCCTCTTTATCT |
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| Protein seq | DERQKPRTNSTLKKKPIKEFKAAEKDIEFFTHTRRIQISSWRKQSGVLSFSSSLS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| SE | Chr02 | 5089758 | 5092980 | + | OsAzu_02g0006820.02 | OsAzu_02g0006820.01,OsAzu_02g0006820.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 10.167137 | 6.258893 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0190500 | RBH | 0.197827 | 0.264505 | 2.627816 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g09740 | RBH | 0.133781 | 0.177902 | 0.676451 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0190500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0023510 | RBH | 0.068336 | 32.532883 | 32.707661 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0006980 | RBH | 0.0 | 1.674140 | 2.312793 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0006760 | RBH | 0.0 | 6.844071 | 7.494315 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0006700 | RBH | 0.000000 | 0.310769 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0006750 | RBH | 0.458112 | 13.813642 | 11.306179 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0084900 | RBH | 3.524311 | 5.1810125 | 4.2854075 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0006700 | RBH | 0.026614 | 0.741682 | 1.324988 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0087600 | RBH | 2.919694 | 2.7042285 | 16.4767215 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0007130 | RBH | 0.0 | 0.106554 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0006720 | RBH | 0.000000 | 8.129844 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0007000 | RBH | 0.831823 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0007010 | RBH | 0.0 | 1.599617 | 0.373832 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0006760 | RBH | 0.000000 | 2.604314 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G006860 | RBH | 0.0 | 3.741201 | 2.910051 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0006830 | RBH | 0.0 | 15.158459 | 5.357853 |
