Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsARC_09g0013950 OGI:09053140 | 16/16 ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) Chr09:19447160-19451500
Gene Symbol -
DNA seq

ACCGGCAAGGCCAGCACACTCACCACTACCAGGTCAAGCCCGGTATCGAGAGGTACTCATTCATTTCATATATGTACAGATGAAAGAACAACCCAACACATATGTCAAAGCTATTCACAAACACGACACAAACCCTCCTGCAAGCTCATATTTGTCAAGGACGGACGGTCTTATTCCCGAACCACCTCTATATCTTCTCCGAGAACAGACACCTACAAGCGTACAGAGCTTCTGCTAGCTGCCTTCGACGGACAAAGCTGCTGCTGCTGAACACCTGATGGGTTCCATCTACATTACCTTGGTATAAAGCTGCTGCTTCTTCTTCTAGTTTCAAAACTGGCAAGAAGTGCCCAGCCTCTGCAACGGACGAGGGCCATCAGCAGCGGCGTGCTTCCGGGCTCGGAAGGCGCTCGGGAGCAGCTCCTGGAACTTGTCGAGGAATGCGCTCCACTCATCAGAGCCCATGTCGGACAGCTTCACAAAACTGGCGCTGGGAGGGAGAAGCTCATTGGCACTCCTGCTACCAGACTGATGCTCACTACCTTTGCCACTATAGTTAGTTTTAGCAGTCACCTTGTTCTTGGGAACACCTTTGTGGTAGGCTCTAGCTTTCCCAATGAAACCGAGCCCCTTAAATGATGCTGATAACTTTGAGACTGAAGGAATATGCTTCGAAAACGGATTTTTCAAGTTGCCAGCATCATCTTTGAACATATCTTCATCATCATCCTCTTCATCACCATCATCATCCTCTTCCTCTTCACCATCTTCCTCATCACACTCATCTAACTTTGACAGTGGATTTCTGTGACTAGCATTCATGAGCCCCAACTTGCTGAAAGATGGTAATTCAGATGCATCTGAACCATCTTCGCTGTCGATAGAGAACTGGGTGAAGCCATCATTGTCATCTTCAACTCCGGCTTCTGGAAGAAATAGCTCTCTTTTCTTGACCCACTTCCTTGCCTCCATGCAAAGAAGCTCAAGCTCACTTGGCTCCTCTTCTTTCCCAGTGAATTGCCTACTCATCATCTCTCCTATCTCTGATAAGCAGAGGCCAAATGCTGCAGCTTCTTTGAGAAATATTGTTGATAGCACCAGCACCCTCAGACATGCTCCACGGATAAAGGGCAGCTCCAAGCGAAGCATTTCAGCATCTTTTACAGGATCCAGATTTGCAATGTATTCGAGTTCCTCCTCAGTGAAAGGAATGGATGCCTGTGGCCAGTGAATCCATTCAAAGTAAGGGTCTTCTAGACTTTCTGGAAGACAGAGACCATGGTCAATAGGAATGAGTTCAGTCTGCACTCCAAAATTGTCAGGCCCAGGTCCAAGCTTCCTAACCAGAAGATTTCCTGCGTGCCTGTCCGTGTTGAATATTCTGATGTCAAGTATGCCAATCCTGTGCACTGCAGATACAGGGAAGCTTGATGTCCCATGGTCACTAGCATCATAATCATGAGCAATAAATTGCTGCAATGATGCAAGCTTGCTCACAGCCTGCAATTTGTTGTGGAAGACTTTACTTTTGCAGCTGACAGTATCATTCACATTGAACACAGAGTGCGTGATCTTGACCAGCATTGTGGGTGGGACATTTGCAAAGTTATCATGGTCAAGAAGGTAAGCAGCAACCTCTCGGAGCCCAGTCTCACCGACCGGTACTGATCTTTTGAGGCCTGGCAGTCCAAGGGTCTTCCCCACAAAACCTTTAGGATTATTTGGAGCAAATGGTTCTTCGTCTGTTGGCTTGACAATTGCAACACGTTCCCCGTAAATGTTCTTGAAGTAGTATGCGCCACCCATGCCACTATTAACAGGTACCGGGTCAACACCATTCCTTATGGCTTCCACAACATCCTTAGCAAGCTGCTTCATCCGAGAAGAGGGGCTCAAACATCCAAGGATTTCAATGGGTTCGCTGTGATCTTGCTCCTGCACATCATGAGCAGTAGGAGAGAGGCAAGGAGTTGAGCTGCTCCGGTGCATTTGATTCTTTCTGAGGAGCAGTGGTGAGTCATTGCGAATACTGCTGAGATCATTATTCAGAACCAGATCACCAAAGGTCAGTGAGCTCTCCTCTGTGGGTACCTTGAGGGCTACCTGGAGCTTCTTTTTCACAGTGTGTGCATTTTCTCCCCTCTCCAGTTCAATGCCCAGGACATAACCATTTTCAGTTTGGACAAAGACTCTTTTCCAACTACATGATCTCCCCTCAGTTCTGCTGCTTGCAGGATATTCACTGCTGAAGCTCCGATCCAGTACTGCAACGGCCATCTGTGTCTGAACAGGACAATCCAAGTCCCTGGACATAGAGTGGCTGAAAGAAGCTACCTTTATCTTCTTGCCCTCCTCCTCTCGTCTACTCCACCAAGGAAGCAAACAAACAGGCAGCAAGAGGAAGAAAGGCAGAATCTTCCAACTGATCACTGCTGAGCAATGGAGAATAGATTATAGAGCAAGGCGTCTCCACCAACTCCGCGTCAACTGGAAGCACTTTATCGCATAATTGAGCAGCAAATATCCTGAGAACGAAGAATTGAACCATGAAACCTAAAATATTTATAAAAAAAAAGGGTAGCTTTTCAACATTCACAGGTTTAAGTAAGTTTAGGGCAAAGCTAGGAAGTATGTAAGACAACCATCCATGGTACAAAAGCAATTCAAGGGAAAATATATGGATATTTGACACAATAAATTGTCTACAGTGCTGCCTTAATCGAGCCTCAACTTGTTTCAACAAACAAATGTCTTTAGATCATCTGTACCGCTGCAAGCGTCAATCTAGTTTCCGAAATTTTGTAACTATAGTTCCGTAACACCGAGCACATCTTGCCAAGTTGGTTTACTTCTGGTTTTCATACTTCTCAGAGTCAGAGGTACACAACTACACAAGCCTTTTGTCGACAGCTATGGGAGTCATCAAAGCCGGTAAGAGAAATAGCTTGTACTACCATAGTTTTGTCCATCATGTATGACAGCAAGCTCCGGTCTGAACCCCGGACAGATAATATCATCAGTTGATGGTAAAACTTTAAAATATACGGCAGAAATCATGTGGAAAACACCCCGCCAATAACATACAGAAGGCCAACATAGAACAAACGAAACTCTTAGCAGTTCTAATTACTCCGTAAGTTAGATCGAGACTACTTTTTTTTGGGGGGGGGGGGGGGGGGGGGGGGGGGTTCTGATGAAAGCCGATCATAAGAATCAGTCAACCACACGGTGGAAACATGGTGATTTTCGAATGGTAAGTCTATAAAGCATAGTGTAGTCATCTAAAATAATCTCGATCACTACAAGTGCAGCAGATAGATTTAAATCCCATACAATACAACCATGAGTGAACCAGAATATAGATTAAAGGAAATGATCTCTGGAAAAGCTACACAGCTCCATTTAACAAATACCCCCAGCACACAGCAAATCGATTTCCCGTACACAGAATCAAAAACAAAATCACTCAAAATTCGATCCTAGAAATTCTCCACTTCTCTGCTACATCAACTTGTTCGCACTGCATGTAAAACGACAAAATACGAACTCACAAAAACAACTCCAAAAAAAACTCTCACGAACTGGCTGAGTCCTAAAACTCGGCGCAAAAAATCGATACATGAATAAAACGAAAGTTGCATCAAAATTTAGAGAGGGAGTGAACCGCACATGAATCTAACATATTCCGAAGTGATTAGACGAGAACCAGATCACACACATTTCGATCGACCAAAACCAAAAAAAAAGTCACTGGGAAATCACGAAACTACACACGATCCCCAAACATTCGCAAATCCTGCACCGTTCACCGGCGAAATCCTCAGACAACGGCTTGAGGAACTGCGATCACACGCTAAACCGAAAACGAGAACACAACAAGCCGAAATCTCCCGCAGGGAACTCACATCCATCAAAGCACAACACCGTGAGACTCATCCGAACAAAAAAAAAAATCCCGATATCTCCATCCCGCTGCCCGCTAGCCCCGCACAACACCGTGGTTGGCATGACATCCATCGTCCCAGGCAGCACACAAGCCGAGTGGAGGAGGAGGAGGGCAGGAGTCGCAGGCAGGCAGAACTCACCGGCGGGACGGATCTGGGCGCTCGCGGGCGGGGAAATGGCCGGAGCGCCGCCTCGTCCACCTCCGGCAGCGGGGATCCGGCGGGGGCGCGCGTCGCCGGCGCAGATCCGACGGCCGGCCGGTGCGCCGTACGCCTCTCCCGCCGCGGTGGCGCGTCCTTTTTTTTTTCTCTTTTTTTTTCGTTTTTTTTTCCTTTTCTCCCTTGGCCTCTGCGCGCTTAACTCGAAGAGGCCCTAGGTGACGGGTTAATCTAAACC

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CDS seq

ATGTCCAGGGACTTGGATTGTCCTGTTCAGACACAGATGGCCGTTGCAGTACTGGATCGGAGCTTCAGCAGTGAATATCCTGCAAGCAGCAGAACTGAGGGGAGATCATGTAGTTGGAAAAGAGTCTTTGTCCAAACTGAAAATGGTTATGTCCTGGGCATTGAACTGGAGAGGGGAGAAAATGCACACACTGTGAAAAAGAAGCTCCAGGTAGCCCTCAAGGTACCCACAGAGGAGAGCTCACTGACCTTTGGTGATCTGGTTCTGAATAATGATCTCAGCAGTATTCGCAATGACTCACCACTGCTCCTCAGAAAGAATCAAATGCACCGGAGCAGCTCAACTCCTTGCCTCTCTCCTACTGCTCATGATGTGCAGGAGCAAGATCACAGCGAACCCATTGAAATCCTTGGATGTTTGAGCCCCTCTTCTCGGATGAAGCAGCTTGCTAAGGATGTTGTGGAAGCCATAAGGAATGGTGTTGACCCGGTACCTGTTAATAGTGGCATGGGTGGCGCATACTACTTCAAGAACATTTACGGGGAACGTGTTGCAATTGTCAAGCCAACAGACGAAGAACCATTTGCTCCAAATAATCCTAAAGGTTTTGTGGGGAAGACCCTTGGACTGCCAGGCCTCAAAAGATCAGTACCGGTCGGTGAGACTGGGCTCCGAGAGGTTGCTGCTTACCTTCTTGACCATGATAACTTTGCAAATGTCCCACCCACAATGCTGGTCAAGATCACGCACTCTGTGTTCAATGTGAATGATACTGTCAGCTGCAAAAGTAAAGTCTTCCACAACAAATTGCAGGCTGTGAGCAAGCTTGCATCATTGCAGCAATTTATTGCTCATGATTATGATGCTAGTGACCATGGGACATCAAGCTTCCCTGTATCTGCAGTGCACAGGATTGGCATACTTGACATCAGAATATTCAACACGGACAGGCACGCAGGAAATCTTCTGGTTAGGAAGCTTGGACCTGGGCCTGACAATTTTGGAGTGCAGACTGAACTCATTCCTATTGACCATGGTCTCTGTCTTCCAGAAAGTCTAGAAGACCCTTACTTTGAATGGATTCACTGGCCACAGGCATCCATTCCTTTCACTGAGGAGGAACTCGAATACATTGCAAATCTGGATCCTGTAAAAGATGCTGAAATGCTTCGCTTGGAGCTGCCCTTTATCCGTGGAGCATGTCTGAGGGTGCTGGTGCTATCAACAATATTTCTCAAAGAAGCTGCAGCATTTGGCCTCTGCTTATCAGAGATAGGAGAGATGATGAGTAGGCAATTCACTGGGAAAGAAGAGGAGCCAAGTGAGCTTGAGCTTCTTTGCATGGAGGCAAGGAAGTGGGTCAAGAAAAGAGAGCTATTTCTTCCAGAAGCCGGAGTTGAAGATGACAATGATGGCTTCACCCAGTTCTCTATCGACAGCGAAGATGGTTCAGATGCATCTGAATTACCATCTTTCAGCAAGTTGGGGCTCATGAATGCTAGTCACAGAAATCCACTGTCAAAGTTAGATGAGTGTGATGAGGAAGATGGTGAAGAGGAAGAGGATGATGATGGTGATGAAGAGGATGATGATGAAGATATGTTCAAAGATGATGCTGGCAACTTGAAAAATCCGTTTTCGAAGCATATTCCTTCAGTCTCAAAGTTATCAGCATCATTTAAGGGGCTCGGTTTCATTGGGAAAGCTAGAGCCTACCACAAAGGTGTTCCCAAGAACAAGGTGACTGCTAAAACTAACTATAGTGGCAAAGGTAGTGAGCATCAGTCTGGTAGCAGGAGTGCCAATGAGCTTCTCCCTCCCAGCGCCAGTTTTGTGAAGCTGTCCGACATGGGCTCTGATGAGTGGAGCGCATTCCTCGACAAGTTCCAGGAGCTGCTCCCGAGCGCCTTCCGAGCCCGGAAGCACGCCGCTGCTGATGGCCCTCGTCCGTTGCAGAGGCTGGGCACTTCTTGCCAGTTTTGA

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Protein seq

MSRDLDCPVQTQMAVAVLDRSFSSEYPASSRTEGRSCSWKRVFVQTENGYVLGIELERGENAHTVKKKLQVALKVPTEESSLTFGDLVLNNDLSSIRNDSPLLLRKNQMHRSSSTPCLSPTAHDVQEQDHSEPIEILGCLSPSSRMKQLAKDVVEAIRNGVDPVPVNSGMGGAYYFKNIYGERVAIVKPTDEEPFAPNNPKGFVGKTLGLPGLKRSVPVGETGLREVAAYLLDHDNFANVPPTMLVKITHSVFNVNDTVSCKSKVFHNKLQAVSKLASLQQFIAHDYDASDHGTSSFPVSAVHRIGILDIRIFNTDRHAGNLLVRKLGPGPDNFGVQTELIPIDHGLCLPESLEDPYFEWIHWPQASIPFTEEELEYIANLDPVKDAEMLRLELPFIRGACLRVLVLSTIFLKEAAAFGLCLSEIGEMMSRQFTGKEEEPSELELLCMEARKWVKKRELFLPEAGVEDDNDGFTQFSIDSEDGSDASELPSFSKLGLMNASHRNPLSKLDECDEEDGEEEEDDDGDEEDDDEDMFKDDAGNLKNPFSKHIPSVSKLSASFKGLGFIGKARAYHKGVPKNKVTAKTNYSGKGSEHQSGSRSANELLPPSASFVKLSDMGSDEWSAFLDKFQELLPSAFRARKHAAADGPRPLQRLGTSCQF

Function Phosphatidylinositol 4-kinase gamma 7 [UniProtKB/Swiss-Prot:Q9SI52]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsARC_09g0013950 OsARC_09g0013950.01 Chr09 19447160 19451500 - NAM
CDS seq

ATGTCCAGGGACTTGGATTGTCCTGTTCAGACACAGATGGCCGTTGCAGTACTGGATCGGAGCTTCAGCAGTGAATATCCTGCAAGCAGCAGAACTGAGGGGAGATCATGTAGTTGGAAAAGAGTCTTTGTCCAAACTGAAAATGGTTATGTCCTGGGCATTGAACTGGAGAGGGGAGAAAATGCACACACTGTGAAAAAGAAGCTCCAGGTAGCCCTCAAGGTACCCACAGAGGAGAGCTCACTGACCTTTGGTGATCTGGTTCTGAATAATGATCTCAGCAGTATTCGCAATGACTCACCACTGCTCCTCAGAAAGAATCAAATGCACCGGAGCAGCTCAACTCCTTGCCTCTCTCCTACTGCTCATGATGTGCAGGAGCAAGATCACAGCGAACCCATTGAAATCCTTGGATGTTTGAGCCCCTCTTCTCGGATGAAGCAGCTTGCTAAGGATGTTGTGGAAGCCATAAGGAATGGTGTTGACCCGGTACCTGTTAATAGTGGCATGGGTGGCGCATACTACTTCAAGAACATTTACGGGGAACGTGTTGCAATTGTCAAGCCAACAGACGAAGAACCATTTGCTCCAAATAATCCTAAAGGTTTTGTGGGGAAGACCCTTGGACTGCCAGGCCTCAAAAGATCAGTACCGGTCGGTGAGACTGGGCTCCGAGAGGTTGCTGCTTACCTTCTTGACCATGATAACTTTGCAAATGTCCCACCCACAATGCTGGTCAAGATCACGCACTCTGTGTTCAATGTGAATGATACTGTCAGCTGCAAAAGTAAAGTCTTCCACAACAAATTGCAGGCTGTGAGCAAGCTTGCATCATTGCAGCAATTTATTGCTCATGATTATGATGCTAGTGACCATGGGACATCAAGCTTCCCTGTATCTGCAGTGCACAGGATTGGCATACTTGACATCAGAATATTCAACACGGACAGGCACGCAGGAAATCTTCTGGTTAGGAAGCTTGGACCTGGGCCTGACAATTTTGGAGTGCAGACTGAACTCATTCCTATTGACCATGGTCTCTGTCTTCCAGAAAGTCTAGAAGACCCTTACTTTGAATGGATTCACTGGCCACAGGCATCCATTCCTTTCACTGAGGAGGAACTCGAATACATTGCAAATCTGGATCCTGTAAAAGATGCTGAAATGCTTCGCTTGGAGCTGCCCTTTATCCGTGGAGCATGTCTGAGGGTGCTGGTGCTATCAACAATATTTCTCAAAGAAGCTGCAGCATTTGGCCTCTGCTTATCAGAGATAGGAGAGATGATGAGTAGGCAATTCACTGGGAAAGAAGAGGAGCCAAGTGAGCTTGAGCTTCTTTGCATGGAGGCAAGGAAGTGGGTCAAGAAAAGAGAGCTATTTCTTCCAGAAGCCGGAGTTGAAGATGACAATGATGGCTTCACCCAGTTCTCTATCGACAGCGAAGATGGTTCAGATGCATCTGAATTACCATCTTTCAGCAAGTTGGGGCTCATGAATGCTAGTCACAGAAATCCACTGTCAAAGTTAGATGAGTGTGATGAGGAAGATGGTGAAGAGGAAGAGGATGATGATGGTGATGAAGAGGATGATGATGAAGATATGTTCAAAGATGATGCTGGCAACTTGAAAAATCCGTTTTCGAAGCATATTCCTTCAGTCTCAAAGTTATCAGCATCATTTAAGGGGCTCGGTTTCATTGGGAAAGCTAGAGCCTACCACAAAGGTGTTCCCAAGAACAAGGTGACTGCTAAAACTAACTATAGTGGCAAAGGTAGTGAGCATCAGTCTGGTAGCAGGAGTGCCAATGAGCTTCTCCCTCCCAGCGCCAGTTTTGTGAAGCTGTCCGACATGGGCTCTGATGAGTGGAGCGCATTCCTCGACAAGTTCCAGGAGCTGCTCCCGAGCGCCTTCCGAGCCCGGAAGCACGCCGCTGCTGATGGCCCTCGTCCGTTGCAGAGGCTGGGCACTTCTTGCCAGTTTTGA

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Protein seq

MSRDLDCPVQTQMAVAVLDRSFSSEYPASSRTEGRSCSWKRVFVQTENGYVLGIELERGENAHTVKKKLQVALKVPTEESSLTFGDLVLNNDLSSIRNDSPLLLRKNQMHRSSSTPCLSPTAHDVQEQDHSEPIEILGCLSPSSRMKQLAKDVVEAIRNGVDPVPVNSGMGGAYYFKNIYGERVAIVKPTDEEPFAPNNPKGFVGKTLGLPGLKRSVPVGETGLREVAAYLLDHDNFANVPPTMLVKITHSVFNVNDTVSCKSKVFHNKLQAVSKLASLQQFIAHDYDASDHGTSSFPVSAVHRIGILDIRIFNTDRHAGNLLVRKLGPGPDNFGVQTELIPIDHGLCLPESLEDPYFEWIHWPQASIPFTEEELEYIANLDPVKDAEMLRLELPFIRGACLRVLVLSTIFLKEAAAFGLCLSEIGEMMSRQFTGKEEEPSELELLCMEARKWVKKRELFLPEAGVEDDNDGFTQFSIDSEDGSDASELPSFSKLGLMNASHRNPLSKLDECDEEDGEEEEDDDGDEEDDDEDMFKDDAGNLKNPFSKHIPSVSKLSASFKGLGFIGKARAYHKGVPKNKVTAKTNYSGKGSEHQSGSRSANELLPPSASFVKLSDMGSDEWSAFLDKFQELLPSAFRARKHAAADGPRPLQRLGTSCQF

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.217967 0.518091 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_09g0474800 RBH 1.874422 0.954777 16.891815
Nipponbare | IRGSP 1.0 | MSU LOC_Os09g29890 RBH 1.259450 0.634009 4.308170
Nipponbare | IRGSP 1.0 | RAP-db Os09g0474800 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_09g0013910 RBH 0.592144 27.739017 26.605049
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_09g0013860 RBH 1.001242 3.761140 12.875291
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_09g0014120 RBH 3.415705 19.803488 33.528828
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_08g0020280 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_09g0014060 RBH 11.459236 19.916647 52.860504
Minghui 63 | MH63RS3 | HZAU OsMH63_09G0303900 RBH 11.8918455 67.2718965 151.354065
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_09g0013960 RBH 0.208675 1.287246 5.062179
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_09G0294000 RBH 17.6026845 27.8513425 57.4434145
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_09g0013950 RBH 0.602674 0.127129 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_09g0013750 RBH 0.883996 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_09g0013840 RBH 3.933899 26.725239 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_09g0013720 RBH 0.929885 0.0 5.244541
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_09g0013780 RBH 0.166543 7.458966 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_09G014250 RBH 0.611983 6.021378 10.605593
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_09g0014030 RBH 0.943404 12.941215 30.662094
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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