Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os09g29890 | OGI:09053140 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr09:18174532-18178939 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TGTGTGTGTGTGTGTGCATATCTGCAGTAATAATATCCAGGTAAACGTCTCCAAAATGGTACAGCGCCGGTACACCGGCAAGGCCAGCACACTCACCACTACCAGGTCAAGCCCGGTATCGAGAGGTACTCATTCATTTCATATATGTACAGATGAAAGAACAACCCAACACATATGTCAAAGCTATTCACAAACACGACACAAACCCTCCTGCAAGCTCATATTTGTCAAGGACGGACGGTCTTATTCCCGAACCACCTCTATATCTTCTCCGAGAACAGACACCTACAAGCGTACAGAGCTTCTGCTAGCTGCCTTCGACGGACAAAGCTGCTGCTGCTGAACACCTGATGGGTTCCATCTACATTACCTTGGTATAAAGCTGCTGCTTCTTCTTCTTCTAGTTTCAAAACTGGCAAGAAGTGCCCAGCCTCTGCAACGGACGAGGGCCATCAGCAGCGGCGTGCTTCCGGGCTCGGAAGGCGCTCGGGAGCAGCTCCTGGAACTTGTCGAGGAATGCGCTCCACTCATCAGAGCCCATGTCGGACAGCTTCACAAAACTGGCGCTGGGAGGGAGAAGCTCATTGGCACTCCTGCTACCAGACTGATGCTCACTACCTTTGCCACTATAGTTAGTTTTAGCAGTCACCTTGTTCTTGGGAACACCTTTGTGGTAGGCTCTAGCTTTCCCAATGAAACCGAGCCCCTTAAATGATGCTGATAACTTTGAGACTGAAGGAATATGCTTCGAAAACGGATTTTTCAAGTTGCCAGCATCATCTTTGAACATATCTTCATCATCATCCTCTTCATCACCATCATCATCCTCTTCCTCTTCACCATCTTCCTCATCACACTCATCTAACTTTGACAGTGGATTTCTGTGACTAGCATTCATGAGCCCGAACTTGCTGAAAGATGGTAATTCAGATGCATCTGAACCATCTTCGCTGTCGATAGAGAACTGGGTGATGCCATCATTGTCATCTTCAACTCCGGCTTCTGGAAGAAATAGCTCTCTTTTCTTGACCCACTTCCTTGCCTCCATGCAAAGAAGCTCAAGCTCACTTGGCTCCTCTTCTTTCCCAGTGAATTGCCTACTCATCATCTCTCCTATCTCTGATAAGCAGAGGCCAAATGCTGCAGCTTCTTTGAGAAATATTGTTGATAGCACCAGCACCCTCAGACATGCTCCACGGATAAAGGGCAGCTCCAAGCGAAGCATTTCAGCATCTTTTACAGGATCCAGATTTGCAATGTATTCGAGTTCCTCCTCAGTGAAAGGAATGGATGCCTGTGGCCAGTGAATCCATTCAAAGTAAGGGTCTTCTAGACTTTCTGGAAGACAGAGACCATGGTCAATAGGAATGAGTTCAGTCTGCACTCCAAAATTGTCAGGCCCAGGTCCAAGCTTCCTAACCAGAAGATTTCCTGCGTGCCTGTCCGTGTTGAATATTCTGATGTCAAGTATGCCAATCCTGTGCACTGCAGATACAGGGAAGCTTGATGTCCCATGGTCACTAGCATCATAATCATGAGCAATAAATTGCTGCAATGATGCAAGCTTGCTCACAGCCTGCAATTTGTTGTGGAAGACTTTACTTTTGCAGCTGACAGTATCATTCACATTGAACACAGAGTGCGTGATCTTGACCAGCATTGTGGGTGGGACATTTGCAAAGTTATCATGGTCAAGAAGGTAAGCAGCAACCTCTCGGAGCCCAGTCTCACCGACCGGTACTGATCTTTTGAGGCCTGGCAGTCCAAGGGTCTTCCCCACAAAACCTTTAGGATTATTTGGAGCAAATGGTTCTTCATCTGTTGGCTTGACAATTGCAACACGTTCCCCGTAAATGTTCTTGAAGTAGTATGCGCCACCCATGCCACTATTAACAGGTACCGGGTCAACACCATTCCTTATGGCTTCCACAACATCCTTAGCAAGCTGCTTCATCCGAGAAGAGGGGCTCAAACATCCAAGGATTTCAATGGGTTCGCTGTGATCTTGCTCCTGCACATCATGAGCAGTAGGAGAGAGGCAAGGAGTTGAGCTGCTCCGGTGCATTTGATTCTTTCTGAGGAGCAGTGGTGAGTCATTGCGAATACTGCTGAGATCATTATTCAGAACCAGATCACCAAAGGTCAGTGAGCTCTCCTCTGTGGGTACCTTGAGGGCTACCTGGAGCTTCTTTTTCACAGTGTGTGCATTTTCTCCCCTCTCCAGTTCAATGCCCAGGACATAACCATTTTCAGTTTGGACAAAGACTCTTTTCCAACTACATGATCTCCCCTCAGTTCTGCTGCTTGCAGGATATTCACTGCTGAAGCTCCGATCCAGTACTGCAACGGCCATCTGTGTCTGAACAGGACAATCCAAGTCCCTGGACATAGAGTGGCTGAAAGAAGCTACCTTTATCTTCTTGCCCTCCTCCTCTCGTCTACTCCACCAAGGAAGCAAACAAACAGGCAGCAAGAGGAAGAAAGGCAGAATCTTCCAACTGATCACTGCTGAGCAATGGAGAATAGATTATAGAGCAAGGCGTCTCCACCAACTCCGCGTCAACTGGAAGCACTTTATCGCATAATTGAGCAGCAAATATCCTGAGAACGAAGAATTGAACCATGAAACCTAAAATATTTATAAAAAAAAGGGTAGCTTTTCAACATTCACAGGTTTAAGTAAGTTTAGGGCAAAGCTAGGAAGTATCTAAGACAACCATCCATGGTACAAAAGCAATTCAAGGGAAAATATATGGATATTTGACACAATAAATTGTCTACAGTGCTGCCTTAATCGAGCCTCAACTTGTTTCAACAAACAAATGTCTTTAGATCATCTGTACCGCTGCAAGCGTCAATCTAGTTTCCGAAATTTTGTAACTATAGTTCCGTAACACCGAGCACATCTTGCCAAGTTGGTTTACTTCTGGTTTTCATACTTCTCAGAGTCAGAGGTACACAACTACACAAGCCTTTTGTCGACAGCTATGGGAGTCATCAAAGCCGGTAAGAGAAATAGCTTGTACTACCATAGTTTTGTCCATCATGTATGACAGCAAGCTCCGGTCTGAACCCCGGACAGACAATATCATCAGTTGATGGTAAAATTTTAAAATATACGGCAGAAATCATGTGGAAAACACCCCGCCAATAACATACAGAAGGCCAACATAGAACAAACGAAACTCTTAGCAGTTCTAATTACTCCGTAAGTTAGATCGAGACTAGTTTTTTTTGGGGGGGGGGGGGGGGGGGGTCTGATGAAAGCCGGTCATAAGAATCAGTCAACCACACGGTGGAAACATGGTGATTTTCGAATGGTAAGTCTATAAAGCATAGTGTAGTCATCTAAAATAATCTCGATCACTACAAGTGCAGCAGATAGATTTAAATCCCATACAATACAACCATGAGTGAACCAGAATATAGATTAAAGGAAATGATCTCTGGAAAAGCTACACAGCTCCATTTAACAAATACCCCCAGCACACAGCAAATCGATTTCCCGTACACAGAATCAAAAACAAAATCACTCAAAATTCGATCCTAGAAATTCTCCACTTCTCTGCTACATCAACTTGTTCGCACTGCATGTAAAACGACAAAATACGAACTCACAAAAACAACTCCAAAAAAAACTCTCACGAACTGGCTGAGTCCTAAAACTCGGCGCAAAAAATCGATACATGAATAAAACGAGAGTTGCATCAAAATTTAGAGAGGGAGTGAACCGCACATGAATCTAACATATTCCGAAGTGATTAGACGAGAACCAGATCACACACATTTCGATCGACCAAAACCAAAAAAAAGTCACTGGGAAATCACGAAACTACACACGATCCCCAAACATTCGCAAATCCTGCACCGTTCACCGGCGAAATCCTCAGACAACGGCTTGAGGAACTGCGATCACACGCTAAACCGAAAACGAGAACACAACAAGCCGAAATCTCCCGCAGGGAACTCACATCCATCAAAGCACAACACCGTGAGACTCATCCGAACAAAAAAAAAATCCCGATATCTCCATCCCGCTGCCCGCTAGCCCCGCACAACACCGTGGTTGGCATGACATCCATCGTCCCAGGCAGCACACAAGCCGAGTGGAGGAGGAGGAGGGCAGGAGTCGCAGGCAGGCAGAACTCACCGGCGGGACGGATCTGGGCGCTCGCGGGCGGGGAAATGGCCGGAGCGCCGCCTCGTCCACCTCCGGCAGCGGGGATCCGGCGGGGGCGCGCGTCGCCGGCGCAGATCCGACGGCCGGCCGGTGCGCCGTACGCCTCTCCCGCCGCGGTGGCGCGTCCTTTTTTTTTTCTCTTTTTTTTTCGTTTTTTTTTCCTTTTCTCCCTTGGCCTCTGCGCGCTTAACTCGAAGAGGCCCTAGGTGACGGGTTAATCTAAACCGT
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| CDS seq | ATGTCCAGGGACTTGGATTGTCCTGTTCAGACACAGATGGCCGTTGCAGTACTGGATCGGAGCTTCAGCAGTGAATATCCTGCAAGCAGCAGAACTGAGGGGAGATCATGTAGTTGGAAAAGAGTCTTTGTCCAAACTGAAAATGGTTATGTCCTGGGCATTGAACTGGAGAGGGGAGAAAATGCACACACTGTGAAAAAGAAGCTCCAGGTAGCCCTCAAGGTACCCACAGAGGAGAGCTCACTGACCTTTGGTGATCTGGTTCTGAATAATGATCTCAGCAGTATTCGCAATGACTCACCACTGCTCCTCAGAAAGAATCAAATGCACCGGAGCAGCTCAACTCCTTGCCTCTCTCCTACTGCTCATGATGTGCAGGAGCAAGATCACAGCGAACCCATTGAAATCCTTGGATGTTTGAGCCCCTCTTCTCGGATGAAGCAGCTTGCTAAGGATGTTGTGGAAGCCATAAGGAATGGTGTTGACCCGGTACCTGTTAATAGTGGCATGGGTGGCGCATACTACTTCAAGAACATTTACGGGGAACGTGTTGCAATTGTCAAGCCAACAGATGAAGAACCATTTGCTCCAAATAATCCTAAAGGTTTTGTGGGGAAGACCCTTGGACTGCCAGGCCTCAAAAGATCAGTACCGGTCGGTGAGACTGGGCTCCGAGAGGTTGCTGCTTACCTTCTTGACCATGATAACTTTGCAAATGTCCCACCCACAATGCTGGTCAAGATCACGCACTCTGTGTTCAATGTGAATGATACTGTCAGCTGCAAAAGTAAAGTCTTCCACAACAAATTGCAGGCTGTGAGCAAGCTTGCATCATTGCAGCAATTTATTGCTCATGATTATGATGCTAGTGACCATGGGACATCAAGCTTCCCTGTATCTGCAGTGCACAGGATTGGCATACTTGACATCAGAATATTCAACACGGACAGGCACGCAGGAAATCTTCTGGTTAGGAAGCTTGGACCTGGGCCTGACAATTTTGGAGTGCAGACTGAACTCATTCCTATTGACCATGGTCTCTGTCTTCCAGAAAGTCTAGAAGACCCTTACTTTGAATGGATTCACTGGCCACAGGCATCCATTCCTTTCACTGAGGAGGAACTCGAATACATTGCAAATCTGGATCCTGTAAAAGATGCTGAAATGCTTCGCTTGGAGCTGCCCTTTATCCGTGGAGCATGTCTGAGGGTGCTGGTGCTATCAACAATATTTCTCAAAGAAGCTGCAGCATTTGGCCTCTGCTTATCAGAGATAGGAGAGATGATGAGTAGGCAATTCACTGGGAAAGAAGAGGAGCCAAGTGAGCTTGAGCTTCTTTGCATGGAGGCAAGGAAGTGGGTCAAGAAAAGAGAGCTATTTCTTCCAGAAGCCGGAGTTGAAGATGACAATGATGGCATCACCCAGTTCTCTATCGACAGCGAAGATGGTTCAGATGCATCTGAATTACCATCTTTCAGCAAGTTCGGGCTCATGAATGCTAGTCACAGAAATCCACTGTCAAAGTTAGATGAGTGTGATGAGGAAGATGGTGAAGAGGAAGAGGATGATGATGGTGATGAAGAGGATGATGATGAAGATATGTTCAAAGATGATGCTGGCAACTTGAAAAATCCGTTTTCGAAGCATATTCCTTCAGTCTCAAAGTTATCAGCATCATTTAAGGGGCTCGGTTTCATTGGGAAAGCTAGAGCCTACCACAAAGGTGTTCCCAAGAACAAGGTGACTGCTAAAACTAACTATAGTGGCAAAGGTAGTGAGCATCAGTCTGGTAGCAGGAGTGCCAATGAGCTTCTCCCTCCCAGCGCCAGTTTTGTGAAGCTGTCCGACATGGGCTCTGATGAGTGGAGCGCATTCCTCGACAAGTTCCAGGAGCTGCTCCCGAGCGCCTTCCGAGCCCGGAAGCACGCCGCTGCTGATGGCCCTCGTCCGTTGCAGAGGCTGGGCACTTCTTGCCAGTTTTGA
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| Protein seq | MSRDLDCPVQTQMAVAVLDRSFSSEYPASSRTEGRSCSWKRVFVQTENGYVLGIELERGENAHTVKKKLQVALKVPTEESSLTFGDLVLNNDLSSIRNDSPLLLRKNQMHRSSSTPCLSPTAHDVQEQDHSEPIEILGCLSPSSRMKQLAKDVVEAIRNGVDPVPVNSGMGGAYYFKNIYGERVAIVKPTDEEPFAPNNPKGFVGKTLGLPGLKRSVPVGETGLREVAAYLLDHDNFANVPPTMLVKITHSVFNVNDTVSCKSKVFHNKLQAVSKLASLQQFIAHDYDASDHGTSSFPVSAVHRIGILDIRIFNTDRHAGNLLVRKLGPGPDNFGVQTELIPIDHGLCLPESLEDPYFEWIHWPQASIPFTEEELEYIANLDPVKDAEMLRLELPFIRGACLRVLVLSTIFLKEAAAFGLCLSEIGEMMSRQFTGKEEEPSELELLCMEARKWVKKRELFLPEAGVEDDNDGITQFSIDSEDGSDASELPSFSKFGLMNASHRNPLSKLDECDEEDGEEEEDDDGDEEDDDEDMFKDDAGNLKNPFSKHIPSVSKLSASFKGLGFIGKARAYHKGVPKNKVTAKTNYSGKGSEHQSGSRSANELLPPSASFVKLSDMGSDEWSAFLDKFQELLPSAFRARKHAAADGPRPLQRLGTSCQF |
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| Function | Phosphatidylinositol 4-kinase gamma 7 [UniProtKB/Swiss-Prot:Q9SI52] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os09g29890 | LOC_Os09g29890.1 | Chr09 | 18174532 | 18178939 | - | MSU_osa1r7 | ||
| CDS seq | ATGTCCAGGGACTTGGATTGTCCTGTTCAGACACAGATGGCCGTTGCAGTACTGGATCGGAGCTTCAGCAGTGAATATCCTGCAAGCAGCAGAACTGAGGGGAGATCATGTAGTTGGAAAAGAGTCTTTGTCCAAACTGAAAATGGTTATGTCCTGGGCATTGAACTGGAGAGGGGAGAAAATGCACACACTGTGAAAAAGAAGCTCCAGGTAGCCCTCAAGGTACCCACAGAGGAGAGCTCACTGACCTTTGGTGATCTGGTTCTGAATAATGATCTCAGCAGTATTCGCAATGACTCACCACTGCTCCTCAGAAAGAATCAAATGCACCGGAGCAGCTCAACTCCTTGCCTCTCTCCTACTGCTCATGATGTGCAGGAGCAAGATCACAGCGAACCCATTGAAATCCTTGGATGTTTGAGCCCCTCTTCTCGGATGAAGCAGCTTGCTAAGGATGTTGTGGAAGCCATAAGGAATGGTGTTGACCCGGTACCTGTTAATAGTGGCATGGGTGGCGCATACTACTTCAAGAACATTTACGGGGAACGTGTTGCAATTGTCAAGCCAACAGATGAAGAACCATTTGCTCCAAATAATCCTAAAGGTTTTGTGGGGAAGACCCTTGGACTGCCAGGCCTCAAAAGATCAGTACCGGTCGGTGAGACTGGGCTCCGAGAGGTTGCTGCTTACCTTCTTGACCATGATAACTTTGCAAATGTCCCACCCACAATGCTGGTCAAGATCACGCACTCTGTGTTCAATGTGAATGATACTGTCAGCTGCAAAAGTAAAGTCTTCCACAACAAATTGCAGGCTGTGAGCAAGCTTGCATCATTGCAGCAATTTATTGCTCATGATTATGATGCTAGTGACCATGGGACATCAAGCTTCCCTGTATCTGCAGTGCACAGGATTGGCATACTTGACATCAGAATATTCAACACGGACAGGCACGCAGGAAATCTTCTGGTTAGGAAGCTTGGACCTGGGCCTGACAATTTTGGAGTGCAGACTGAACTCATTCCTATTGACCATGGTCTCTGTCTTCCAGAAAGTCTAGAAGACCCTTACTTTGAATGGATTCACTGGCCACAGGCATCCATTCCTTTCACTGAGGAGGAACTCGAATACATTGCAAATCTGGATCCTGTAAAAGATGCTGAAATGCTTCGCTTGGAGCTGCCCTTTATCCGTGGAGCATGTCTGAGGGTGCTGGTGCTATCAACAATATTTCTCAAAGAAGCTGCAGCATTTGGCCTCTGCTTATCAGAGATAGGAGAGATGATGAGTAGGCAATTCACTGGGAAAGAAGAGGAGCCAAGTGAGCTTGAGCTTCTTTGCATGGAGGCAAGGAAGTGGGTCAAGAAAAGAGAGCTATTTCTTCCAGAAGCCGGAGTTGAAGATGACAATGATGGCATCACCCAGTTCTCTATCGACAGCGAAGATGGTTCAGATGCATCTGAATTACCATCTTTCAGCAAGTTCGGGCTCATGAATGCTAGTCACAGAAATCCACTGTCAAAGTTAGATGAGTGTGATGAGGAAGATGGTGAAGAGGAAGAGGATGATGATGGTGATGAAGAGGATGATGATGAAGATATGTTCAAAGATGATGCTGGCAACTTGAAAAATCCGTTTTCGAAGCATATTCCTTCAGTCTCAAAGTTATCAGCATCATTTAAGGGGCTCGGTTTCATTGGGAAAGCTAGAGCCTACCACAAAGGTGTTCCCAAGAACAAGGTGACTGCTAAAACTAACTATAGTGGCAAAGGTAGTGAGCATCAGTCTGGTAGCAGGAGTGCCAATGAGCTTCTCCCTCCCAGCGCCAGTTTTGTGAAGCTGTCCGACATGGGCTCTGATGAGTGGAGCGCATTCCTCGACAAGTTCCAGGAGCTGCTCCCGAGCGCCTTCCGAGCCCGGAAGCACGCCGCTGCTGATGGCCCTCGTCCGTTGCAGAGGCTGGGCACTTCTTGCCAGTTTTGA
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| Protein seq | MSRDLDCPVQTQMAVAVLDRSFSSEYPASSRTEGRSCSWKRVFVQTENGYVLGIELERGENAHTVKKKLQVALKVPTEESSLTFGDLVLNNDLSSIRNDSPLLLRKNQMHRSSSTPCLSPTAHDVQEQDHSEPIEILGCLSPSSRMKQLAKDVVEAIRNGVDPVPVNSGMGGAYYFKNIYGERVAIVKPTDEEPFAPNNPKGFVGKTLGLPGLKRSVPVGETGLREVAAYLLDHDNFANVPPTMLVKITHSVFNVNDTVSCKSKVFHNKLQAVSKLASLQQFIAHDYDASDHGTSSFPVSAVHRIGILDIRIFNTDRHAGNLLVRKLGPGPDNFGVQTELIPIDHGLCLPESLEDPYFEWIHWPQASIPFTEEELEYIANLDPVKDAEMLRLELPFIRGACLRVLVLSTIFLKEAAAFGLCLSEIGEMMSRQFTGKEEEPSELELLCMEARKWVKKRELFLPEAGVEDDNDGITQFSIDSEDGSDASELPSFSKFGLMNASHRNPLSKLDECDEEDGEEEEDDDGDEEDDDEDMFKDDAGNLKNPFSKHIPSVSKLSASFKGLGFIGKARAYHKGVPKNKVTAKTNYSGKGSEHQSGSRSANELLPPSASFVKLSDMGSDEWSAFLDKFQELLPSAFRARKHAAADGPRPLQRLGTSCQF
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os09g29890 | LOC_Os09g29890.2 | Chr09 | 18174532 | 18177976 | - | MSU_osa1r7 | ||
| CDS seq | ATGTCCAGGGACTTGGATTGTCCTGTTCAGACACAGATGGCCGTTGCAGTACTGGATCGGAGCTTCAGCAGTGAATATCCTGCAAGCAGCAGAACTGAGGGGAGATCATGTAGTTGGAAAAGAGTCTTTGTCCAAACTGAAAATGGTTATGTCCTGGGCATTGAACTGGAGAGGGGAGAAAATGCACACACTGTGAAAAAGAAGCTCCAGGTAGCCCTCAAGGTACCCACAGAGGAGAGCTCACTGACCTTTGGTGATCTGGTTCTGAATAATGATCTCAGCAGTATTCGCAATGACTCACCACTGCTCCTCAGAAAGAATCAAATGCACCGGAGCAGCTCAACTCCTTGCCTCTCTCCTACTGCTCATGATGTGCAGGAGCAAGATCACAGCGAACCCATTGAAATCCTTGGATGTTTGAGCCCCTCTTCTCGGATGAAGCAGCTTGCTAAGGATGTTGTGGAAGCCATAAGGAATGGTGTTGACCCGGTACCTGTTAATAGTGGCATGGGTGGCGCATACTACTTCAAGAACATTTACGGGGAACGTGTTGCAATTGTCAAGCCAACAGATGAAGAACCATTTGCTCCAAATAATCCTAAAGGTTTTGTGGGGAAGACCCTTGGACTGCCAGGCCTCAAAAGATCAGTACCGGTCGGTGAGACTGGGCTCCGAGAGGTTGCTGCTTACCTTCTTGACCATGATAACTTTGCAAATGTCCCACCCACAATGCTGGTCAAGATCACGCACTCTGTGTTCAATGTGAATGATACTGTCAGCTGCAAAAGTAAAGTCTTCCACAACAAATTGCAGGCTGTGAGCAAGCTTGCATCATTGCAGCAATTTATTGCTCATGATTATGATGCTAGTGACCATGGGACATCAAGCTTCCCTGTATCTGCAGTGCACAGGATTGGCATACTTGACATCAGAATATTCAACACGGACAGGCACGCAGGAAATCTTCTGGTTAGGAAGCTTGGACCTGGGCCTGACAATTTTGGAGTGCAGACTGAACTCATTCCTATTGACCATGGTCTCTGTCTTCCAGAAAGTCTAGAAGACCCTTACTTTGAATGGATTCACTGGCCACAGGCATCCATTCCTTTCACTGAGGAGGAACTCGAATACATTGCAAATCTGGATCCTGTAAAAGATGCTGAAATGCTTCGCTTGGAGCTGCCCTTTATCCGTGGAGCATGTCTGAGGGTGCTGGTGCTATCAACAATATTTCTCAAAGAAGCTGCAGCATTTGGCCTCTGCTTATCAGAGATAGGAGAGATGATGAGTAGGCAATTCACTGGGAAAGAAGAGGAGCCAAGTGAGCTTGAGCTTCTTTGCATGGAGGCAAGGAAGTGGGTCAAGAAAAGAGAGCTATTTCTTCCAGAAGCCGGAGTTGAAGATGACAATGATGGCATCACCCAGTTCTCTATCGACAGCGAAGATGGTTCAGATGCATCTGAATTACCATCTTTCAGCAAGTTCGGGCTCATGAATGCTAGTCACAGAAATCCACTGTCAAAGTTAGATGAGTGTGATGAGGAAGATGGTGAAGAGGAAGAGGATGATGATGGTGATGAAGAGGATGATGATGAAGATATGTTCAAAGATGATGCTGGCAACTTGAAAAATCCGTTTTCGAAGCATATTCCTTCAGTCTCAAAGTTATCAGCATCATTTAAGGGGCTCGGTTTCATTGGGAAAGCTAGAGCCTACCACAAAGGTGTTCCCAAGAACAAGGTGACTGCTAAAACTAACTATAGTGGCAAAGGTAGTGAGCATCAGTCTGGTAGCAGGAGTGCCAATGAGCTTCTCCCTCCCAGCGCCAGTTTTGTGAAGCTGTCCGACATGGGCTCTGATGAGTGGAGCGCATTCCTCGACAAGTTCCAGGAGCTGCTCCCGAGCGCCTTCCGAGCCCGGAAGCACGCCGCTGCTGATGGCCCTCGTCCGTTGCAGAGGCTGGGCACTTCTTGCCAGTTTTGA
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| Protein seq | MSRDLDCPVQTQMAVAVLDRSFSSEYPASSRTEGRSCSWKRVFVQTENGYVLGIELERGENAHTVKKKLQVALKVPTEESSLTFGDLVLNNDLSSIRNDSPLLLRKNQMHRSSSTPCLSPTAHDVQEQDHSEPIEILGCLSPSSRMKQLAKDVVEAIRNGVDPVPVNSGMGGAYYFKNIYGERVAIVKPTDEEPFAPNNPKGFVGKTLGLPGLKRSVPVGETGLREVAAYLLDHDNFANVPPTMLVKITHSVFNVNDTVSCKSKVFHNKLQAVSKLASLQQFIAHDYDASDHGTSSFPVSAVHRIGILDIRIFNTDRHAGNLLVRKLGPGPDNFGVQTELIPIDHGLCLPESLEDPYFEWIHWPQASIPFTEEELEYIANLDPVKDAEMLRLELPFIRGACLRVLVLSTIFLKEAAAFGLCLSEIGEMMSRQFTGKEEEPSELELLCMEARKWVKKRELFLPEAGVEDDNDGITQFSIDSEDGSDASELPSFSKFGLMNASHRNPLSKLDECDEEDGEEEEDDDGDEEDDDEDMFKDDAGNLKNPFSKHIPSVSKLSASFKGLGFIGKARAYHKGVPKNKVTAKTNYSGKGSEHQSGSRSANELLPPSASFVKLSDMGSDEWSAFLDKFQELLPSAFRARKHAAADGPRPLQRLGTSCQF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.259450 | 0.634009 | 4.308170 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0474800 | RBH | 1.874422 | 0.954777 | 16.891815 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g38200 | RBH | 0.0 | 0.0 | 0.232275 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0474800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0013910 | RBH | 0.592144 | 27.739017 | 26.605049 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0013860 | RBH | 1.001242 | 3.761140 | 12.875291 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0014120 | RBH | 3.415705 | 19.803488 | 33.528828 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0013950 | RBH | 0.217967 | 0.518091 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0014060 | RBH | 11.459236 | 19.916647 | 52.860504 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0303900 | RBH | 11.8918455 | 67.2718965 | 151.354065 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0013960 | RBH | 0.208675 | 1.287246 | 5.062179 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0294000 | RBH | 17.6026845 | 27.8513425 | 57.4434145 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0013950 | RBH | 0.602674 | 0.127129 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0013750 | RBH | 0.883996 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0013840 | RBH | 3.933899 | 26.725239 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0013720 | RBH | 0.929885 | 0.0 | 5.244541 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0013780 | RBH | 0.166543 | 7.458966 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G014250 | RBH | 0.611983 | 6.021378 | 10.605593 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0014030 | RBH | 0.943404 | 12.941215 | 30.662094 |
