Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsARC_09g0005060 OGI:09025490 | 6/16 ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) Chr09:9367466-9370153
Gene Symbol RPS2, OsRPS2, -
DNA seq

TCATATCCGCTTTAGATGAGTAATCCCTTCATGTGTTGCTTGGAGAGGGAACTCCTGAAGCAATGGACACCCAAACACATCCATGTATTCCAAACAAGGGCTTTCCAGCTTAAGCCTGCTGAATATTTCCAGATTTGGCAAGTAGTTCAACTGTAGTATTCTGAGTTTAGGGAAGGCATGGACTCTGTTGTTGTCTGCCATGATTTCACTTTCTTCTCCATCATCTGTGTCAGCTATGATACATTTGAGCATGCTGCAAAATGACAAGTCAAGGTGTTCCAAGTATGGCAATTTGATAATCCAGGTGAGATCAGTAAGTCCATTGTTCTCGACGATGTTCAGCATACGGATATAGAGGAGATCATGCCCCAGGCTTACTTTACTTAGTTTTGGCAGGCGCCAGAATGTTAGGAACTCCAAGTATGGGATTGCCTTTTCAGGGTAACTATCATCAACATATTCAATTGACAAGGTTTCTATGCCGAGGCACATTTTGAAGTTCACCACTGACATGCTACTCTTCAATTTTAAGCTGACAGAGGATTCTCCTTGAAGTTGTTCTACACCAAGATGGTGTACATTAATGTCAGGAAGTTCGGACAACTTCTTGAGAGCAAGGCTTGTCCTGACAGTGATACCAAGGGCTAGCCCGTTGTCAAAGCAATCCAATTCAGTTAAGCTGAACTCGTTAATTTGCTTGCCATTTGCACAACTACCATCAAATTCCTTCTCGAAGCCCGTATACTTACTTTGGTATAAGTACAACACTTTCAACATTGAAAGCCTGGATATCACACCATAAGGTATGTTCATCAGATGGTTTGTGAAACTGAGGTTCAGTATCCTTAACTGTTTCAAGTCACCAAACTTTTCAGGAAGAGAGGCTATGAATGAGTCAGCAAGGTTGAGGCACTGCAAATTGACGAGGTGGCATATCTCCCTTGGAAGATACTCAAATTGGGTCCAACTTAGATCCAAGTACGTGAGTGCAGACATACTTTGGAAGAAAGTTGGTAGTATCTCACTGAAATGGAAATTCTGCTGAAGGACAAGCACCGACAAATTCGGGCAGCTTGGGAGCACAGAAGGCAGAGATTCAACGAAGTTGCACATCAGTGAGATCGTTGTAGCACTGGCCCATCTCTCTATATCCGTAACCCTCCTCATACCAAGGCCTGCTTGCATAAGCCAACCTTTCTCTGATGTGATCCAGAGCGCCATGTCACGGATCGTGTCATGAAGCCGGACCTCAGTGTGCCCTATGTCCCCCTCCTCCAGTAAGCACACCCTTTTCAGCTGCCATATAACACTATACCCATCATTGTGGCTTTGACATAGTGCTCTTCCTATAGGTATCAAACCCAATCCAATCCAACAGTTCACCAGGTCAATGTTCCATATTGAGTAGTCTTGTGGCCAGATGGCACAAGCCAAGAAGCATTCTCTCAGGTGATCACTACTCAGGTTGTCATAGGTAAGCCTCAAGGTGGCAAGAATAGCGTTTTCCTTCTTCAATCCTGATTTTTCGAAAAGTTGGTAGCTCTTGTTGAGTGATCTGAGGGCAGCCTCCCACTCTTGCCACTGCCTTCTTATCGACATGGTCCTCCCAACAGAAACAAGTGCTAGGGGAAGTCCTTTGCACCTCTCACAAACCTCCCTTGCTAAACGTTGTATCCTCATGTCCAAGTTGATAGTTGCTTCTGTGACATTGGATAGGAATAGCTTCCATGCATCATCTTGAGGTAGGCATTCCACTTTTATTGTTGTTCTTGCCTCCATTTCAGCACACACTTGCTCCGAACGGGTTGCTAGGACTACTTTATGGATCTTGTCACGACCTGGCGGTGGAACCCCGATTTCTTCGAGGCTAATTTTCTCCCACAGGTCATCCAGGAGAAGCAAGAAGTTCTTGTTCCAGAGATAGTCGAAGATAGCTGCACGACGGGATTCTCTCCCGGTGTCCATCCTCAGCTCCAGCCCAAGTTTCTCAAGTAAGTTTATCTGAAGATTCTCTGGCCTGCAGCTCCTTGATGCTGTAACACAGATGACAAGATCGAAGTGCAGGCCATCAACAGTACCAAGGAATTCATTGTTGATGAGCTTTAGCAGCGTCGTCTTCCCAACTCCACCCATTCCCCATATCCCAATTACAGGGATGTTCTTATCTTTCTCTCTGAGGTAGCACATGACCATGTCAAGGTAATGCTCCATTCCGATCACCACCGATGTTCCGATAGGCCTGTGCTCGACTTTGGGTGGAGGTTTGCAAGGAAATTCACCTTCACTAAATTCACCTCCCGCGTACACTTGCTTCAACTTTATCATACTCTTTCTGGCTCTCTTGCTGATCCTGTAGCTCCTTGCAACATTTAAATTTGGCGTCAACCTTTGAAAACATGGAGTCCTATTGTCATACTCGGTTTTTATTTCATCTGCTTCACCAATGGCATGTTCTGCATCTTCCATCCAATCCCTCACTACATGTGGGCAAACTTTCTGCTTCCTCTCTGCATTCTCAATCATTAGCTCAATATCATCCCTCCTTGCTTGCAGTTTTCTTCTAAGCTCTGTTAGCTTCTTAACATTTTGCGCAGTTTTGAAAGGATATGTTAGGTGTGGTAGAAGCCATCCGCCGATGCGACACATTATTGTGGTGGCTCCTACGGCAATCTGGGCAATGGAACCCAT

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CDS seq

ATGGGTTCCATTGCCCAGATTGCCGTAGGAGCCACCACAATAATGTGTCGCATCGGCGGATGGCTTCTACCACACCTAACATATCCTTTCAAAACTGCGCAAAATGTTAAGAAGCTAACAGAGCTTAGAAGAAAACTGCAAGCAAGGAGGGATGATATTGAGCTAATGATTGAGAATGCAGAGAGGAAGCAGAAAGTTTGCCCACATGTAGTGAGGGATTGGATGGAAGATGCAGAACATGCCATTGGTGAAGCAGATGAAATAAAAACCGAGTATGACAATAGGACTCCATGTTTTCAAAGGTTGACGCCAAATTTAAATGTTGCAAGGAGCTACAGGATCAGCAAGAGAGCCAGAAAGAGTATGATAAAGTTGAAGCAAGTGTACGCGGGAGGTGAATTTAGTGAAGGTGAATTTCCTTGCAAACCTCCACCCAAAGTCGAGCACAGGCCTATCGGAACATCGGTGGTGATCGGAATGGAGCATTACCTTGACATGGTCATGTGCTACCTCAGAGAGAAAGATAAGAACATCCCTGTAATTGGGATATGGGGAATGGGTGGAGTTGGGAAGACGACGCTGCTAAAGCTCATCAACAATGAATTCCTTGGTACTGTTGATGGCCTGCACTTCGATCTTGTCATCTGTGTTACAGCATCAAGGAGCTGCAGGCCAGAGAATCTTCAGATAAACTTACTTGAGAAACTTGGGCTGGAGCTGAGGATGGACACCGGGAGAGAATCCCGTCGTGCAGCTATCTTCGACTATCTCTGGAACAAGAACTTCTTGCTTCTCCTGGATGACCTGTGGGAGAAAATTAGCCTCGAAGAAATCGGGGTTCCACCGCCAGGTCGTGACAAGATCCATAAAGTAGTCCTAGCAACCCGTTCGGAGCAAGTGTGTGCTGAAATGGAGGCAAGAACAACAATAAAAGTGGAATGCCTACCTCAAGATGATGCATGGAAGCTATTCCTATCCAATGTCACAGAAGCAACTATCAACTTGGACATGAGGATACAACGTTTAGCAAGGGAGGTTTGTGAGAGGTGCAAAGGACTTCCCCTAGCACTTGTTTCTGTTGGGAGGACCATGTCGATAAGAAGGCAGTGGCAAGAGTGGGAGGCTGCCCTCAGATCACTCAACAAGAGCTACCAACTTTTCGAAAAATCAGGATTGAAGAAGGAAAACGCTATTCTTGCCACCTTGAGGCTTACCTATGACAACCTGAGTAGTGATCACCTGAGAGAATGCTTCTTGGCTTGTGCCATCTGGCCACAAGACTACTCAATATGGAACATTGACCTGGTGAACTGTTGGATTGGATTGGGTTTGATACCTATAGGAAGAGCACTATGTCAAAGCCACAATGATGGGTATAGTGTTATATGGCAGCTGAAAAGGGTGTGCTTACTGGAGGAGGGGGACATAGGGCACACTGAGGTCCGGCTTCATGACACGATCCGTGACATGGCGCTCTGGATCACATCAGAGAAAGGTTGGCTTATGCAAGCAGGCCTTGGTATGAGGAGGGTTACGGATATAGAGAGATGGGCCAGTGCTACAACGATCTCACTGATGTGCAACTTCGTTGAATCTCTGCCTTCTGTGCTCCCAAGCTGCCCGAATTTGTCGGTGCTTGTCCTTCAGCAGAATTTCCATTTCAGTGAGATACTACCAACTTTCTTCCAAAGTATGTCTGCACTCACGTACTTGGATCTAAGTTGGACCCAATTTGAGTATCTTCCAAGGGAGATATGCCACCTCGTCAATTTGCAGTGCCTCAACCTTGCTGACTCATTCATAGCCTCTCTTCCTGAAAAGTTTGGTGACTTGAAACAGTTAAGGATACTGAACCTCAGTTTCACAAACCATCTGATGAACATACCTTATGGTGTGATATCCAGGCTTTCAATGTTGAAAGTGTTGTACTTATACCAAAGTAAGTATACGGGCTTCGAGAAGGAATTTGATGGTAGTTGTGCAAATGGCAAGCAAATTAACGAGTTCAGCTTAACTGAATTGGATTGCTTTGACAACGGGCTAGCCCTTGGTATCACTGTCAGGACAAGCCTTGCTCTCAAGAAGTTGTCCGAACTTCCTGACATTAATGTACACCATCTTGGTGTAGAACAACTTCAAGGAGAATCCTCTGTCAGCTTAAAATTGAAGAGTAGCATGTCAGTGGTGAACTTCAAAATGTGCCTCGGCATAGAAACCTTGTCAATTGAATATGTTGATGATAGTTACCCTGAAAAGGCAATCCCATACTTGGAGTTCCTAACATTCTGGCGCCTGCCAAAACTAAGTAAAGTAAGCCTGGGGCATGATCTCCTCTATATCCGTATGCTGAACATCGTCGAGAACAATGGACTTACTGATCTCACCTGGATTATCAAATTGCCATACTTGGAACACCTTGACTTGTCATTTTGCAGCATGCTCAAATGTATCATAGCTGACACAGATGATGGAGAAGAAAGTGAAATCATGGCAGACAACAACAGAGTCCATGCCTTCCCTAAACTCAGAATACTACAGTTGAACTACTTGCCAAATCTGGAAATATTCAGCAGGCTTAAGCTGGAAAGCCCTTGTTTGGAATACATGGATGTGTTTGGGTGTCCATTGCTTCAGGAGTTCCCTCTCCAAGCAACACATGAAGGGATTACTCATCTAAAGCGGATATGA

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Protein seq

MGSIAQIAVGATTIMCRIGGWLLPHLTYPFKTAQNVKKLTELRRKLQARRDDIELMIENAERKQKVCPHVVRDWMEDAEHAIGEADEIKTEYDNRTPCFQRLTPNLNVARSYRISKRARKSMIKLKQVYAGGEFSEGEFPCKPPPKVEHRPIGTSVVIGMEHYLDMVMCYLREKDKNIPVIGIWGMGGVGKTTLLKLINNEFLGTVDGLHFDLVICVTASRSCRPENLQINLLEKLGLELRMDTGRESRRAAIFDYLWNKNFLLLLDDLWEKISLEEIGVPPPGRDKIHKVVLATRSEQVCAEMEARTTIKVECLPQDDAWKLFLSNVTEATINLDMRIQRLAREVCERCKGLPLALVSVGRTMSIRRQWQEWEAALRSLNKSYQLFEKSGLKKENAILATLRLTYDNLSSDHLRECFLACAIWPQDYSIWNIDLVNCWIGLGLIPIGRALCQSHNDGYSVIWQLKRVCLLEEGDIGHTEVRLHDTIRDMALWITSEKGWLMQAGLGMRRVTDIERWASATTISLMCNFVESLPSVLPSCPNLSVLVLQQNFHFSEILPTFFQSMSALTYLDLSWTQFEYLPREICHLVNLQCLNLADSFIASLPEKFGDLKQLRILNLSFTNHLMNIPYGVISRLSMLKVLYLYQSKYTGFEKEFDGSCANGKQINEFSLTELDCFDNGLALGITVRTSLALKKLSELPDINVHHLGVEQLQGESSVSLKLKSSMSVVNFKMCLGIETLSIEYVDDSYPEKAIPYLEFLTFWRLPKLSKVSLGHDLLYIRMLNIVENNGLTDLTWIIKLPYLEHLDLSFCSMLKCIIADTDDGEESEIMADNNRVHAFPKLRILQLNYLPNLEIFSRLKLESPCLEYMDVFGCPLLQEFPLQATHEGITHLKRI

Function Disease resistance protein RPS2 [UniProtKB/Swiss-Prot:Q42484]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsARC_09g0005060 OsARC_09g0005060.01 Chr09 9367466 9370153 - NAM
CDS seq

ATGGGTTCCATTGCCCAGATTGCCGTAGGAGCCACCACAATAATGTGTCGCATCGGCGGATGGCTTCTACCACACCTAACATATCCTTTCAAAACTGCGCAAAATGTTAAGAAGCTAACAGAGCTTAGAAGAAAACTGCAAGCAAGGAGGGATGATATTGAGCTAATGATTGAGAATGCAGAGAGGAAGCAGAAAGTTTGCCCACATGTAGTGAGGGATTGGATGGAAGATGCAGAACATGCCATTGGTGAAGCAGATGAAATAAAAACCGAGTATGACAATAGGACTCCATGTTTTCAAAGGTTGACGCCAAATTTAAATGTTGCAAGGAGCTACAGGATCAGCAAGAGAGCCAGAAAGAGTATGATAAAGTTGAAGCAAGTGTACGCGGGAGGTGAATTTAGTGAAGGTGAATTTCCTTGCAAACCTCCACCCAAAGTCGAGCACAGGCCTATCGGAACATCGGTGGTGATCGGAATGGAGCATTACCTTGACATGGTCATGTGCTACCTCAGAGAGAAAGATAAGAACATCCCTGTAATTGGGATATGGGGAATGGGTGGAGTTGGGAAGACGACGCTGCTAAAGCTCATCAACAATGAATTCCTTGGTACTGTTGATGGCCTGCACTTCGATCTTGTCATCTGTGTTACAGCATCAAGGAGCTGCAGGCCAGAGAATCTTCAGATAAACTTACTTGAGAAACTTGGGCTGGAGCTGAGGATGGACACCGGGAGAGAATCCCGTCGTGCAGCTATCTTCGACTATCTCTGGAACAAGAACTTCTTGCTTCTCCTGGATGACCTGTGGGAGAAAATTAGCCTCGAAGAAATCGGGGTTCCACCGCCAGGTCGTGACAAGATCCATAAAGTAGTCCTAGCAACCCGTTCGGAGCAAGTGTGTGCTGAAATGGAGGCAAGAACAACAATAAAAGTGGAATGCCTACCTCAAGATGATGCATGGAAGCTATTCCTATCCAATGTCACAGAAGCAACTATCAACTTGGACATGAGGATACAACGTTTAGCAAGGGAGGTTTGTGAGAGGTGCAAAGGACTTCCCCTAGCACTTGTTTCTGTTGGGAGGACCATGTCGATAAGAAGGCAGTGGCAAGAGTGGGAGGCTGCCCTCAGATCACTCAACAAGAGCTACCAACTTTTCGAAAAATCAGGATTGAAGAAGGAAAACGCTATTCTTGCCACCTTGAGGCTTACCTATGACAACCTGAGTAGTGATCACCTGAGAGAATGCTTCTTGGCTTGTGCCATCTGGCCACAAGACTACTCAATATGGAACATTGACCTGGTGAACTGTTGGATTGGATTGGGTTTGATACCTATAGGAAGAGCACTATGTCAAAGCCACAATGATGGGTATAGTGTTATATGGCAGCTGAAAAGGGTGTGCTTACTGGAGGAGGGGGACATAGGGCACACTGAGGTCCGGCTTCATGACACGATCCGTGACATGGCGCTCTGGATCACATCAGAGAAAGGTTGGCTTATGCAAGCAGGCCTTGGTATGAGGAGGGTTACGGATATAGAGAGATGGGCCAGTGCTACAACGATCTCACTGATGTGCAACTTCGTTGAATCTCTGCCTTCTGTGCTCCCAAGCTGCCCGAATTTGTCGGTGCTTGTCCTTCAGCAGAATTTCCATTTCAGTGAGATACTACCAACTTTCTTCCAAAGTATGTCTGCACTCACGTACTTGGATCTAAGTTGGACCCAATTTGAGTATCTTCCAAGGGAGATATGCCACCTCGTCAATTTGCAGTGCCTCAACCTTGCTGACTCATTCATAGCCTCTCTTCCTGAAAAGTTTGGTGACTTGAAACAGTTAAGGATACTGAACCTCAGTTTCACAAACCATCTGATGAACATACCTTATGGTGTGATATCCAGGCTTTCAATGTTGAAAGTGTTGTACTTATACCAAAGTAAGTATACGGGCTTCGAGAAGGAATTTGATGGTAGTTGTGCAAATGGCAAGCAAATTAACGAGTTCAGCTTAACTGAATTGGATTGCTTTGACAACGGGCTAGCCCTTGGTATCACTGTCAGGACAAGCCTTGCTCTCAAGAAGTTGTCCGAACTTCCTGACATTAATGTACACCATCTTGGTGTAGAACAACTTCAAGGAGAATCCTCTGTCAGCTTAAAATTGAAGAGTAGCATGTCAGTGGTGAACTTCAAAATGTGCCTCGGCATAGAAACCTTGTCAATTGAATATGTTGATGATAGTTACCCTGAAAAGGCAATCCCATACTTGGAGTTCCTAACATTCTGGCGCCTGCCAAAACTAAGTAAAGTAAGCCTGGGGCATGATCTCCTCTATATCCGTATGCTGAACATCGTCGAGAACAATGGACTTACTGATCTCACCTGGATTATCAAATTGCCATACTTGGAACACCTTGACTTGTCATTTTGCAGCATGCTCAAATGTATCATAGCTGACACAGATGATGGAGAAGAAAGTGAAATCATGGCAGACAACAACAGAGTCCATGCCTTCCCTAAACTCAGAATACTACAGTTGAACTACTTGCCAAATCTGGAAATATTCAGCAGGCTTAAGCTGGAAAGCCCTTGTTTGGAATACATGGATGTGTTTGGGTGTCCATTGCTTCAGGAGTTCCCTCTCCAAGCAACACATGAAGGGATTACTCATCTAAAGCGGATATGA

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Protein seq

MGSIAQIAVGATTIMCRIGGWLLPHLTYPFKTAQNVKKLTELRRKLQARRDDIELMIENAERKQKVCPHVVRDWMEDAEHAIGEADEIKTEYDNRTPCFQRLTPNLNVARSYRISKRARKSMIKLKQVYAGGEFSEGEFPCKPPPKVEHRPIGTSVVIGMEHYLDMVMCYLREKDKNIPVIGIWGMGGVGKTTLLKLINNEFLGTVDGLHFDLVICVTASRSCRPENLQINLLEKLGLELRMDTGRESRRAAIFDYLWNKNFLLLLDDLWEKISLEEIGVPPPGRDKIHKVVLATRSEQVCAEMEARTTIKVECLPQDDAWKLFLSNVTEATINLDMRIQRLAREVCERCKGLPLALVSVGRTMSIRRQWQEWEAALRSLNKSYQLFEKSGLKKENAILATLRLTYDNLSSDHLRECFLACAIWPQDYSIWNIDLVNCWIGLGLIPIGRALCQSHNDGYSVIWQLKRVCLLEEGDIGHTEVRLHDTIRDMALWITSEKGWLMQAGLGMRRVTDIERWASATTISLMCNFVESLPSVLPSCPNLSVLVLQQNFHFSEILPTFFQSMSALTYLDLSWTQFEYLPREICHLVNLQCLNLADSFIASLPEKFGDLKQLRILNLSFTNHLMNIPYGVISRLSMLKVLYLYQSKYTGFEKEFDGSCANGKQINEFSLTELDCFDNGLALGITVRTSLALKKLSELPDINVHHLGVEQLQGESSVSLKLKSSMSVVNFKMCLGIETLSIEYVDDSYPEKAIPYLEFLTFWRLPKLSKVSLGHDLLYIRMLNIVENNGLTDLTWIIKLPYLEHLDLSFCSMLKCIIADTDDGEESEIMADNNRVHAFPKLRILQLNYLPNLEIFSRLKLESPCLEYMDVFGCPLLQEFPLQATHEGITHLKRI

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_09g0311600 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os09g14060 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os09g0311600 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_09g0006610 SBH 0.0 0.0 0.000000
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_09g0006620 SBH 0.0 0.382289 0.162114
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_09g0005680 SBH 0.220727 0.487780 2.033234
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_09g0005030 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_09g0005270 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_09G0148300 RBH 0.004849 0.0086315 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_09g0005430 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_09G0133500 SBH 0.5482375 0.5792675 11.6485065
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_09g0006690 SBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_09g0006540 SBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_09g0006540 SBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_09g0006450 SBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_09g0006520 SBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_09G007020 SBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_09g0005220 RBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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