Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_07g0017910 | OGI:07058810 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr07:20925973-20935546 | ||||||||
| Gene Symbol | GNS13, Gns13, OsGns13, GNS12, Gns12, OsGns12 | ||||||||||
| DNA seq | caatcatttgaatactaacagcagggtttcattcaacaggagtgaacggtacatttattcgtctcttcaatcccaactaattattaatggtaccattatttttttctctgcagaaaaatatgaagtgattctttaatccatcctcactgccaagctgttgctggtaagtttgcagtcgattgatcttcaattgcagtttgttctgtcccagcattgtttggtgggagcacgcagtttcctatttctgtaaattattgaacaagcactaataagataaccacttactacttgaaacagaagtgtgcaatttttcttagggaatatgtacattagtagcagtagggcatatatatcatgcacagtaaaatgagagaaaactcacttggttgctggttgacaatagaagcagcaccggcaaagtcacacgatccactagcccggccggtggtctggtaaaaatcgttgaatgcataggtcgcgtgtgctaccttagtgtcaggatcaaagcaccgtgcacctggttgaatggcgctgcagtccgcgcagctaccacatgcatagtctagtgcattttgtagttgtgcgtccccgacctccgatttcgcaacgcaccaacttgggttcggatcacatatgcctatatctcgggaaacaattcacaggacaaataaacaatgagatggaatcaagatatgaatgcacatttgcgaaagcctcattgatcttaaagattgagagcaaaacattacttggcgatggcttgaatacgatggaagcggcgccagagaagttgcaagtgccgctggcctggcccttgcgttggtagtagtcgttgaatgcgtacgacgcgtgtgcaaccaaggtgtttggttcgaaacacacactgccctgccggatagcgctgcagtccgcgccgttaccgcacgcaaagtccaatgctgactgcaatgctgcactcccaacatctgttcttgccacacaccaacttgtctttgtggggcaagctccgccaccgccaccgcccctaaagtcaacctcatacaccttctgaccatttgggtagaacaagccaaagtttctctctatggctggcccaggcttctcgttttcattgaaaagagagaagatgtaggcggagacgtcacgcataccggaggctccggatactacacgtctgataagcccattgttgtacgcttgggcatcggctatcgtggctatcgagtccgtatcggctgcagctagcatggaaaataggggaaatgtacctccagaggggtgccctgattctgaagcttgcacactaaggattccatctcgtcgagccattgagaccgttaagctaccaccagaaaccctgtttatcgcagcataaacagcgtcgagctgagcatcaaagaggctgaagtacctgatgccggtattgccatcaagcacaccagcgttagggcggaacgtcgcgaactccagagagattttgtcaggctgagccacgtatgcgaagtacgggtagagattgaccatgaagtacgagccggtctgtttcaagaagtcaatcatgggcttcatcaccgattgcgcgatctcatctttaaactcccccgcagatggaggggacgactgcttgagcgcatcgaaggcgatcggcgtggacacctttacgtcgttcgccaggttcaggttctccagcgccttgtgcaagtttcgcatggccgagacgagcatcccggtcagttcgggtctctgcctgaacacctcgttcccgacggcgacgccgttgatcagcgtgccccggctgcgatacggcaccacgttgttcgtcacccagtcggtcgcgctgcgcagatcctggccggcggcggccagatcggcgttgggtatcgccaccatcaccttgatgccggtgttcgccatcgcgtccagcaccgtctggtccgcgtcgaagatcctcaccgcggagatgccgttcgccttcagaaggctcaccgccgccggtgggtcgatcaggttgttcgcgtccctcccgtagcacaccccgatctcgccagcatctgcattgacgagcaaggaattactccatcgtttggcgttgccgatcagctgcattggcaggaaagccagaagcacgttacctgcagcacgggggagaaggagcagcggcaacgccgcggccacgaggagggcgtggaggaggtgactgaatgccatgctctactctgcaactgcacagtgcacaccgtggcaagaggcagcgtaaatcaagagggctgattgcttctttggagatccctacatctggtccatctggagcaagaaagaaaagaaaaacacacttttcaagctggacatcgaaactttgactcaaaatcctcgaatatttctactcgttgtcttgaactttcagttcgagtccccaaacttatcacacaaaaatcataactttgaactaaaatatccaaacgtttctatgcaaaagcctctaacttggaactcgagtatctaaaatttgtattagaaccatgaacttcctactcgaatcataacaattccaatttgaatcaacaagctctcacccaaaaatcacagcagcagccagcaggtccgatcttagagctgtcaagatggcttccttgtgtcttcccgtcagttaaagagaaagggcagtggatctttgaatacggaatggtgcaaaggaaagcgaagaacttggaaagctgaggagatggaagacgaattggctaagtcttaaaagattcatggcgttcggtactaaacgtgactaaaaaagtattaattcgagatataccctacatctttgactaacacccagctaatgtgccgacaaaacagaagctaagttgcagcataaatacttcagcaatagcatctcaactactcctattgcattggatactctttggtggaacggttaacaaacatatttatcggtacaatagagtaacctatgtctcttgatatatatgcccataaggatggactctaggataggatgggcactatatgttagtgatatatgtccctttgactttacatcagaggaaccacttccagtcgacaatggtggataaacacaacatgattaattgatttatttgtcatttttctttttcaagagtgatggagtggagatgttgatatgctaaggtgtcttcagagtcacaatctcacatttatgcacctaaaatccttcccctacttcgtcgagtctcaaccgggcagccatttgaattatttcctcttgatcgctttcccaacacatggcaactaatactcccccgttgactttttaacaaacgttcgacatttcgtcttattcaaaaaatttatgtaattatcatttattttattgtgacttgatttatcatcaaatgtgctttaagcatgacataagtatttttgtatttgcataaaaaatttgaataagacgaatggtcaaatattggttacaaagtcaacagcgtcatacattaaaatatggagagagtataatctactgaccacttatactattggtgatcaacgtagactaattggcatctctcaacagattaggggacggcaacatagctttcagcctttccacctatcacaatatcgcttcggcggatttatccttttttttttcgaaatgaccttggcaacttctgaaaaaaaaaagaaacaaacatggtctctgtatatgttatatttatccttctgcagcatatccctcctgccgctacccgaaacaaaagaaaattataatgggtttgtgctaatatacatctcaacataaatttttagaaaaaaaaagactaaaccaaaatttaaagttttggcaagttcgaatttcaacggtcctagtaaataaatcactctcttatctcaactattgataaaacagcctggaagttgttttggtgtttcttaaccccacatattacttgcttttgccctcaatttttttctttacacacaagatgcatacacacaatcccacacccacgtacattaacagacgccaaaacggacaaagactggtgataaatcttggacctcattaaaatattgttggaatcatacccatatttgcgtaatacttatgcacaataatttgaaaaaaaaagtgggtggaactatatgttggactatttttaccaacatatacatcagctgggaaaggtccatcttacactcttaatatataggactgtttagttcgcgaaaagaaaatttgtaggtgtcacattggacgtttgatcggatgtcggtaggggttttcggatacgaatgaaaaaactaatttcataactcgcgtggaaaccgtgagatatcaatttattaagcctaattaatccgtcattagcacatataggttactatagcacttatggctaatcatgaactaattaggctcaaaagatttgtctcgcgatttccatacaaactatgcaattagtctttttatttatctatatttaatgctttatgtatgtgttcaaagatttgatgtgatgtttttaggtaaaaaaatttttgggaattaaacaaggccataatgtgtaggtatagacgttaaaacatctactcccttcgtcccataatataagggattttgcgtttttctttgcagcgtttgaccactcgtcttattcaattttttttgaaattattatttattttatttgtgacttactttattatctacagtattttaagcataacttttcgttttttatacttgcaaaaaaaaattgaataagacgagtggtcaaacgttacaatcaaaactcaaaatcccttatattttgggacggagggagtatatatcagcaattctatctttaccagactcagctttttgtcagtaattcttacagtagattatctttcgctagagtttaggtactatgtagaggactccaccacccccacgctattgatgccttcctctcgttcaatcagcaacacgccaacacctgcaattagaacgaagtttattagtaggtcaagtggtcaaccatggggagctttcgatggtggcgtgtaaggctcctcacatccagcattcttatctataattaattagttggttcgtcccatctttcaacatttttttttctacttgcatcatgcatcatatattgcatggcctaaggcgcctgcctccgtcccataaaaaaaaccaatctagaattggatgtgctatatcctagcacattaaatatgttccatccaatcttaaggcatgttcagattatagctaaaataaatcttaccaaattttgacaatatcaaaatttcaacaatttaacaatattgccaagttttgacagcatttatatgtagttattagagtttggtaaaataaaactaaatggatgcaaatatttgacaactctaaaaaatggtatgcctttgaaatgataacaatctgaacaatcccttaggtttttttatatgatagagagagtagctatctacatcaagcctagcaggggagagccaaacaacttatcgtttgagcaagtttaatactcgtcgaaactagaattcagtaatataaacagggtagcgcacgggatctaaaagttgatggatacagagacaagaatttagacaggttcaggccctctcgatgagaggttataccctactccggtttagggatttgaatccaccaggtgtaatatagatctaacgatctggttatgaatctgcccccaaagaggcgtcatgccctccttatataggcgaaggagtagtcttataagatagagaccatatcccttatagtttagatctcctatacctaatctacaaacttaacaaaccaggactacaaaccgttccttgatagacaagtaaatgttatacccgagtcctagtctttatatatattctatatacatgatctattccctataaccagtcggatagcctagccatgtgagtatgtggtacccataattctccacaatattgtcttggggggacttttctctgttaactgttttgttgttttgatttggagctggttcaggctttgcacttatgcctgttgaaccttctgtaataataagttggtcgttttgtgtttcaggagttcttaaactgttccagatgttcaggagttgtgatgtctagttcctttctcctctagtgctcgaattgccttagaaggtggaataggatggcacctatatatgatgccgaaaagaattgggtatgtttcagttggcgatgcttttattttaaattaaagaggaagcgaggacgtgggcgctggcaggtgcaaagtgcttacgcgagctcttacgtacccaaccatgtattgtgtatagagtgctttctattttcctttattccttggggttgtaattttgtacttctatatttaatgaaaaacacaatctcgtgcagttttccttttttaaaaaaaaattcaaacctttgcagcggttatggaaatggtagagtgcattgatcctctctaaaaataaataaataaatacttcttcatgttttcagttctgcttaggagtctgatcatatgcacatacatgataaattgctcagggtatgtaactgaggaatttcatccaacaggaatgaacggtatatttacttatttcaatagacccgactggaaaaactgctacaaacatatcattttatttttgccaaacgatgtggacttgttcttcgatatccatccccactatcgcgaactgatggtagctagcttagccctcggtcttcagtacgctttgtccagttcaagcattggcggaaggacgcagtttccaatctctgaaaataattcaacaaacacctaagatcaccatttaactagttgaatcatcacgtagtgtacaaaaacaagtgtgtattttttttacgcaaaatgtacattattagcacttgaaggtttcgaacgcattgttaatggcatttagtttcaaaacaaaacatacaatggagattaaaatggcacgtggttgtaagccacgaaagaagatggatcaattaattagctatgtttgcttcgaaaaattatatatgggagaagaaatgcatgggcaataatttttgaaagcaatatctgaaacaaacaagatgagaatatctgttgagcttgaactcacctggtgcctggtaggtaatggaaccagcaccaccgaagtcacacgagccactgactcggccaacacgctggtaatagtcgttgaatgcgtaggatgcgtgcgccaccttagtgttaggctcgaaacaccgtgcaccgggctggatggcgctgcagtctgcacagctgccgcatgcataatctagggctgcctgtagccgcatgtccccaactgcagggttcgcgatacaccaacttggatttgggtcgcaaatgcctgcaatttagtagataaacagtgaggcagatttatcaaatggttgtgagaactaaacaaaattgcattttaagaaatatgtggtcgtaggaactaactttctgatggttggaagacaatataagcagcgccagcaaagtcgcatgtcccattggcttggcccatccgctggtagtagtcattgaatgcgaaagacgcatgcgcaaccattgtgtttggctcgaagcaaggtttgccctgttggatagcgctgcagtctgcgccgttactacaagcccaatccaacgccgcctgcagccgggaattccccacagctaaatttgccacgcaccagctcgccttggtgggacaaataccaccaccatgaaaatcaacctcgtaaacctttgtaccgttagggtagaacaggccgaagttgcgttctacagatgctccagccttcttgttctcgttgaaaagagcgaagatgtacacagagacatcaggcataccagaggctccaaacagagcgcgtctgataataccattgttgaatgcttgggcgttagcttttgtagccacatccacttcggcatcagcttgtgtggtcaacttgcggaactgaccaccggagggatgcccacattccgaacatttgacgggcacccttggtgtcgggtgcccccatcttgtttgggccattgaggccctcacactatcaccagaaacctgatttatagcgtagtaaacagcatcgagctgggcatcaaagagactatagtatgtgatgtggctccacggatcgactacaccggcgttggggccaaatgtagcgtaatcgcgggagatctggcctttagagttagcccaggcaatatatgggtagaaattgaccatgagatatgagttggtctgttgcaagaaatcgatcatgggactcattaccgactgggcgatgctgtcttgaaacacacccttggatgatggccatgacacattgaccgcatcaaaattaatgggtgttgatacctttatgatgtcggcaaggcccagtctcgctagcgccgtctgcacattcttcatcgccggtaacagctgaggggtcaagttgggtgcttgcctgaacacctcattccccacagccacaccattgatttgtgtgccctggttatagtacggaacaatgtttgttttcacccagtctagcgcacttccctgatcgtggcctgcagaagcaaggtccttgttgggtagtgccaccatcaccttgatgcctgtgttggacagcgatctcagcaccgtcgggtcggcgtcgtagatcctcaccttcgtgatgccgttctccttcagaagattcaccacggccggtggatccatcaaatcgtccgcgtccctcccgtagcacacgcccacctcgccagcctctgcagtcagtggtggagtcagaaagatagatttttgagcccaggcaaacttcaatataagtgcccctttgaatcacagaaatgaaaaaacggaggaataagaaaaacataggattctgacaggaatgaaagtgtaaaacagaggattgcaaaacacaggaaaaacggaatgactgtttgattggaccacaggaaaaacacaggaatttaaggagagataaagactcaaaggatttcttccatgaggttctatctcttattaaaattcctccaaaacttgtatgggaagaggtatttaataggaatttcataggatttcatagggttcatttctttgattcaaaaggctttgtaggaaaaattcctataagaataaaatcctctaaaattcctatgaattttctttcaattaaagagggcctaactagtatttgttattttctcattgatttatccatcaatattaaaatttaatggagttttcgccggcgagccggactgcccgggctagccgagcggtcgctctgccactgacagtgcagtggaaagctaagaaacaccggttctgttggtacaaagctgcacatacttaagcatatctaaataatactactagtccaaaataatcgaaagcgtttctacgtttgccatggttacctgtacgggagatggagagcagcagcaatgcggtggcaaggaggagggagcagaggaggtgagtgagtgccatatgtgctctgatagtttgatcaagacgaatttgatggt
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| CDS seq | atggcactcactcacctcctctgctccctcctccttgccaccgcattgctgctgctctccatctcccgtacagaggctggcgaggtgggcgtgtgctacgggagggacgcggacgatttgatggatccaccggccgtggtgaatcttctgaaggagaacggcatcacgaaggtgaggatctacgacgccgacccgacggtgctgagatcgctgtccaacacaggcatcaaggtgatggtggcactacccaacaaggaccttgcttctgcaggccacgatcagggaagtgcgctagactgggtgaaaacaaacattgttccgtactataaccagggcacacaaatcaatggtgtggctgtggggaatgaggtgttcaggcaagcacccaacttgacccctcagctgttaccggcgatgaagaatgtgcagacggcgctagcgagactgggccttgccgacatcataaaggtatcaacacccattaattttgatgcggtcaatgtgtcatggccatcatccaagggtgtgtttcaagacagcatcgcccagtcggtaatgagtcccatgatcgatttcttgcaacagaccaactcatatctcatggtcaatttctacccatatattgcctgggctaactctaaaggccagatctcccgcgattacgctacatttggccccaacgccggtgtagtcgatccgtggagccacatcacatactatagtctctttgatgcccagctcgatgctgtttactacgctataaatcaggtttctggtgatagtgtgagggcctcaatggcccaaacaagatgggggcacccgacaccaagggtgcccgtcaaatgttcggaatgtgggcatccctccggtggtcagttccgcaagttgaccacacaagctgatgccgaagtggatgtggctacaaaagctaacgcccaagcattcaacaatggtattatcagacgcgctctgtttggagcctctggtatgcctgatgtctctgtgtacatcttcgctcttttcaacgagaacaagaaggctggagcatctgtagaacgcaacttcggcctgttctaccctaacggtacaaaggtttacgaggttgattttcatggtggtggtatttgtcccaccaaggcgagctggtgcgtggcaaatttagctgtggggaattcccggctgcaggcggcgttggattgggcttgtagtaacggcgcagactgcagcgctatccaacagggcaaaccttgcttcgagccaaacacaatggttgcgcatgcgtctttcgcattcaatgactactaccagcggatgggccaagccaatgggacatgcgactttgctggcgctgcttatattgtcttccaaccatcagaaagcatttgcgacccaaatccaagttggtgtatcgcgaaccctgcagttggggacatgcggctacaggcagccctagattatgcatgcggcagctgtgcagactgcagcgccatccagcccggtgcacggtgtttcgagcctaacactaaggtggcgcacgcatcctacgcattcaacgactattaccagcgtgttggccgagtcagtggctcgtgtgacttcggtggtgctggttccattacctaccaggcaccagatggaccagatgtagggatctccaaagaagcaatcagccctcttgatttacgctgcctcttgccacgtcacctcctccacgccctcctcgtggccgcggcgttgccgctgctccttctcccccgtgctgcagatgctggcgagatcggggtgtgctacgggagggacgcgaacaacctgatcgacccaccggcggcggtgagccttctgaaggcgaacggcatctccgcggtgaggatcttcgacgcggaccagacggtgctggacgcgatggcgaacaccggcatcaaggtgatggtggcgatacccaacgccgatctggccgccgccggccaggatctgcgcagcgcgaccgactgggtgacgaacaacgtggtgccgtatcgcagccggggcacgctgatcaacggcgtcgccgtcgggaacgaggtgttcaggcagagacccgaactgaccgggatgctcgtctcggccatgcgaaacttgcacaaggcgctggagaacctgaacctggcgaacgacgtaaaggtgtccacgccgatcgccttcgatgcgctcaagcagtcgtcccctccatctgcgggggagtttaaagatgagatcgcgcaatcggtgatgaagcccatgattgacttcttgaaacagaccggctcgtacttcatggtcaatctctacccgtacttcgcatacgtggctcagcctgacaaaatctctctggagttcgcgacgttccgccctaacgctggtgtgcttgatggcaataccggcatcaggtacttcagcctctttgatgctcagctcgacgctgtttatgctgcgataaacagggtttctggtggtagcttaacggtctcaatggctcgacgagatggaatccttagtgtgcaagcttcagaatcagggcacccctctggaggtacatttcccctattttccatgctagctgcagccgatacggactcgatagccacgatagccgatgcccaagcgtacaacaatgggcttatcagacgtgtagtatccggagcctccggtatgcgtgacgtctccgcctacatcttctctcttttcaatgaaaacgagaagcctgggccagccatagagagaaactttggcttgttctacccaaatggtcagaaggtgtatgaggttgactttaggggcggtggcggtggcggagcttgccccacaaagacaagttggtgtgtggcaagaacagatgttgggagtgcagcattgcagtcagcattggactttgcgtgcggtaacggcgcggactgcagcgctatccggcagggcagtgtgtgtttcgaaccaaacaccttggttgcacacgcgtcgtacgcattcaacgactactaccaacgcaagggccaggccagcggcacttgcaacttctctggcgccgcttccatcgtattcaagccatcgccaagcatatgtgatccgaacccaagttggtgcgttgcgaaatcggaggtcggggacgcacaactacaaaatgcactagactatgcatgtggtagctgcgcggactgcagcgccattcaaccaggtgcacggtgctttgatcctgacactaaggtagcacacgcgacctatgcattcaacgatttttaccagaccaccggccgggctagtggatcgtgtgactttgccggtgctgcttctattgtcaaccagcaaccaaaaataggaaactgcgtgctcccaccaaacaatgctgggacagaacaaactgcaattgaagatcaatcgactgcaaacttaccagcaacagcttggcagtga
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| Protein seq | MALTHLLCSLLLATALLLLSISRTEAGEVGVCYGRDADDLMDPPAVVNLLKENGITKVRIYDADPTVLRSLSNTGIKVMVALPNKDLASAGHDQGSALDWVKTNIVPYYNQGTQINGVAVGNEVFRQAPNLTPQLLPAMKNVQTALARLGLADIIKVSTPINFDAVNVSWPSSKGVFQDSIAQSVMSPMIDFLQQTNSYLMVNFYPYIAWANSKGQISRDYATFGPNAGVVDPWSHITYYSLFDAQLDAVYYAINQVSGDSVRASMAQTRWGHPTPRVPVKCSECGHPSGGQFRKLTTQADAEVDVATKANAQAFNNGIIRRALFGASGMPDVSVYIFALFNENKKAGASVERNFGLFYPNGTKVYEVDFHGGGICPTKASWCVANLAVGNSRLQAALDWACSNGADCSAIQQGKPCFEPNTMVAHASFAFNDYYQRMGQANGTCDFAGAAYIVFQPSESICDPNPSWCIANPAVGDMRLQAALDYACGSCADCSAIQPGARCFEPNTKVAHASYAFNDYYQRVGRVSGSCDFGGAGSITYQAPDGPDVGISKEAISPLDLRCLLPRHLLHALLVAAALPLLLLPRAADAGEIGVCYGRDANNLIDPPAAVSLLKANGISAVRIFDADQTVLDAMANTGIKVMVAIPNADLAAAGQDLRSATDWVTNNVVPYRSRGTLINGVAVGNEVFRQRPELTGMLVSAMRNLHKALENLNLANDVKVSTPIAFDALKQSSPPSAGEFKDEIAQSVMKPMIDFLKQTGSYFMVNLYPYFAYVAQPDKISLEFATFRPNAGVLDGNTGIRYFSLFDAQLDAVYAAINRVSGGSLTVSMARRDGILSVQASESGHPSGGTFPLFSMLAAADTDSIATIADAQAYNNGLIRRVVSGASGMRDVSAYIFSLFNENEKPGPAIERNFGLFYPNGQKVYEVDFRGGGGGGACPTKTSWCVARTDVGSAALQSALDFACGNGADCSAIRQGSVCFEPNTLVAHASYAFNDYYQRKGQASGTCNFSGAASIVFKPSPSICDPNPSWCVAKSEVGDAQLQNALDYACGSCADCSAIQPGARCFDPDTKVAHATYAFNDFYQTTGRASGSCDFAGAASIVNQQPKIGNCVLPPNNAGTEQTAIEDQSTANLPATAWQ |
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| Function | Glucan endo-1,3-beta-glucosidase 13 [UniProtKB/Swiss-Prot:Q9FJU9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_07g0017910 | OsARC_07g0017910.02 | Chr07 | 20925982 | 20935533 | - | NAM | ||
| CDS seq | atggcactcactcacctcctctgctccctcctccttgccaccgcattgctgctgctctccatctcccgtacagaggctggcgaggtgggcgtgtgctacgggagggacgcggacgatttgatggatccaccggccgtggtgaatcttctgaaggagaacggcatcacgaaggtgaggatctacgacgccgacccgacggtgctgagatcgctgtccaacacaggcatcaaggtgatggtggcactacccaacaaggaccttgcttctgcaggccacgatcagggaagtgcgctagactgggtgaaaacaaacattgttccgtactataaccagggcacacaaatcaatggtgtggctgtggggaatgaggtgttcaggcaagcacccaacttgacccctcagctgttaccggcgatgaagaatgtgcagacggcgctagcgagactgggccttgccgacatcataaaggtatcaacacccattaattttgatgcggtcaatgtgtcatggccatcatccaagggtgtgtttcaagacagcatcgcccagtcggtaatgagtcccatgatcgatttcttgcaacagaccaactcatatctcatggtcaatttctacccatatattgcctgggctaactctaaaggccagatctcccgcgattacgctacatttggccccaacgccggtgtagtcgatccgtggagccacatcacatactatagtctctttgatgcccagctcgatgctgtttactacgctataaatcaggtttctggtgatagtgtgagggcctcaatggcccaaacaagatgggggcacccgacaccaagggtgcccgtcaaatgttcggaatgtgggcatccctccggtggtcagttccgcaagttgaccacacaagctgatgccgaagtggatgtggctacaaaagctaacgcccaagcattcaacaatggtattatcagacgcgctctgtttggagcctctggtatgcctgatgtctctgtgtacatcttcgctcttttcaacgagaacaagaaggctggagcatctgtagaacgcaacttcggcctgttctaccctaacggtacaaaggtttacgaggttgattttcatggtggtggtatttgtcccaccaaggcgagctggtgcgtggcaaatttagctgtggggaattcccggctgcaggcggcgttggattgggcttgtagtaacggcgcagactgcagcgctatccaacagggcaaaccttgcttcgagccaaacacaatggttgcgcatgcgtctttcgcattcaatgactactaccagcggatgggccaagccaatgggacatgcgactttgctggcgctgcttatattgtcttccaaccatcagaaagcatttgcgacccaaatccaagttggtgtatcgcgaaccctgcagttggggacatgcggctacaggcagccctagattatgcatgcggcagctgtgcagactgcagcgccatccagcccggtgcacggtgtttcgagcctaacactaaggtggcgcacgcatcctacgcattcaacgactattaccagcgtgttggccgagtcagtggctcgtgtgacttcggtggtgctggttccattacctaccaggcaccagatggaccagatgtagggatctccaaagaagcaatcagccctcttgatttacgctgcctcttgccacgtcacctcctccacgccctcctcgtggccgcggcgttgccgctgctccttctcccccgtgctgcagatgctggcgagatcggggtgtgctacgggagggacgcgaacaacctgatcgacccaccggcggcggtgagccttctgaaggcgaacggcatctccgcggtgaggatcttcgacgcggaccagacggtgctggacgcgatggcgaacaccggcatcaaggtgatggtggcgatacccaacgccgatctggccgccgccggccaggatctgcgcagcgcgaccgactgggtgacgaacaacgtggtgccgtatcgcagccggggcacgctgatcaacggcgtcgccgtcgggaacgaggtgttcaggcagagacccgaactgaccgggatgctcgtctcggccatgcgaaacttgcacaaggcgctggagaacctgaacctggcgaacgacgtaaaggtgtccacgccgatcgccttcgatgcgctcaagcagtcgtcccctccatctgcgggggagtttaaagatgagatcgcgcaatcggtgatgaagcccatgattgacttcttgaaacagaccggctcgtacttcatggtcaatctctacccgtacttcgcatacgtggctcagcctgacaaaatctctctggagttcgcgacgttccgccctaacgctggtgtgcttgatggcaataccggcatcaggtacttcagcctctttgatgctcagctcgacgctgtttatgctgcgataaacagggtttctggtggtagcttaacggtctcaatggctcgacgagatggaatccttagtgtgcaagcttcagaatcagggcacccctctggaggtacatttcccctattttccatgctagctgcagccgatacggactcgatagccacgatagccgatgcccaagcgtacaacaatgggcttatcagacgtgtagtatccggagcctccggtatgcgtgacgtctccgcctacatcttctctcttttcaatgaaaacgagaagcctgggccagccatagagagaaactttggcttgttctacccaaatggtcagaaggtgtatgaggttgactttaggggcggtggcggtggcggagcttgccccacaaagacaagttggtgtgtggcaagaacagatgttgggagtgcagcattgcagtcagcattggactttgcgtgcggtaacggcgcggactgcagcgctatccggcagggcagtgtgtgtttcgaaccaaacaccttggttgcacacgcgtcgtacgcattcaacgactactaccaacgcaagggccaggccagcggcacttgcaacttctctggcgccgcttccatcgtattcaagccatcgccaagcatatgtgatccgaacccaagttggtgcgttgcgaaatcggaggtcggggacgcacaactacaaaatgcactagactatgcatgtggtagctgcgcggactgcagcgccattcaaccaggtgcacggtgctttgatcctgacactaaggtagcacacgcgacctatgcattcaacgatttttaccagaccaccggccgggctagtggatcgtgtgactttgccggtgctgcttctattgtcaaccagcaaccaaaaataggaaactgcgtgctcccaccaaacaatgctgggacagaacaaactgcaattgaagatcaatcgactgcaaacttaccagcaacagcttggcagtga
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| Protein seq | MALTHLLCSLLLATALLLLSISRTEAGEVGVCYGRDADDLMDPPAVVNLLKENGITKVRIYDADPTVLRSLSNTGIKVMVALPNKDLASAGHDQGSALDWVKTNIVPYYNQGTQINGVAVGNEVFRQAPNLTPQLLPAMKNVQTALARLGLADIIKVSTPINFDAVNVSWPSSKGVFQDSIAQSVMSPMIDFLQQTNSYLMVNFYPYIAWANSKGQISRDYATFGPNAGVVDPWSHITYYSLFDAQLDAVYYAINQVSGDSVRASMAQTRWGHPTPRVPVKCSECGHPSGGQFRKLTTQADAEVDVATKANAQAFNNGIIRRALFGASGMPDVSVYIFALFNENKKAGASVERNFGLFYPNGTKVYEVDFHGGGICPTKASWCVANLAVGNSRLQAALDWACSNGADCSAIQQGKPCFEPNTMVAHASFAFNDYYQRMGQANGTCDFAGAAYIVFQPSESICDPNPSWCIANPAVGDMRLQAALDYACGSCADCSAIQPGARCFEPNTKVAHASYAFNDYYQRVGRVSGSCDFGGAGSITYQAPDGPDVGISKEAISPLDLRCLLPRHLLHALLVAAALPLLLLPRAADAGEIGVCYGRDANNLIDPPAAVSLLKANGISAVRIFDADQTVLDAMANTGIKVMVAIPNADLAAAGQDLRSATDWVTNNVVPYRSRGTLINGVAVGNEVFRQRPELTGMLVSAMRNLHKALENLNLANDVKVSTPIAFDALKQSSPPSAGEFKDEIAQSVMKPMIDFLKQTGSYFMVNLYPYFAYVAQPDKISLEFATFRPNAGVLDGNTGIRYFSLFDAQLDAVYAAINRVSGGSLTVSMARRDGILSVQASESGHPSGGTFPLFSMLAAADTDSIATIADAQAYNNGLIRRVVSGASGMRDVSAYIFSLFNENEKPGPAIERNFGLFYPNGQKVYEVDFRGGGGGGACPTKTSWCVARTDVGSAALQSALDFACGNGADCSAIRQGSVCFEPNTLVAHASYAFNDYYQRKGQASGTCNFSGAASIVFKPSPSICDPNPSWCVAKSEVGDAQLQNALDYACGSCADCSAIQPGARCFDPDTKVAHATYAFNDFYQTTGRASGSCDFAGAASIVNQQPKIGNCVLPPNNAGTEQTAIEDQSTANLPATAWQ
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_07g0017910 | OsARC_07g0017910.03 | Chr07 | 20925973 | 20928915 | - | NAM | ||
| CDS seq | atggcattcagtcacctcctccacgccctcctcgtggccgcggcgttgccgctgctccttctcccccgtgctgcagatgctggcgagatcggggtgtgctacgggagggacgcgaacaacctgatcgacccaccggcggcggtgagccttctgaaggcgaacggcatctccgcggtgaggatcttcgacgcggaccagacggtgctggacgcgatggcgaacaccggcatcaaggtgatggtggcgatacccaacgccgatctggccgccgccggccaggatctgcgcagcgcgaccgactgggtgacgaacaacgtggtgccgtatcgcagccggggcacgctgatcaacggcgtcgccgtcgggaacgaggtgttcaggcagagacccgaactgaccgggatgctcgtctcggccatgcgaaacttgcacaaggcgctggagaacctgaacctggcgaacgacgtaaaggtgtccacgccgatcgccttcgatgcgctcaagcagtcgtcccctccatctgcgggggagtttaaagatgagatcgcgcaatcggtgatgaagcccatgattgacttcttgaaacagaccggctcgtacttcatggtcaatctctacccgtacttcgcatacgtggctcagcctgacaaaatctctctggagttcgcgacgttccgccctaacgctggtgtgcttgatggcaataccggcatcaggtacttcagcctctttgatgctcagctcgacgctgtttatgctgcgataaacagggtttctggtggtagcttaacggtctcaatggctcgacgagatggaatccttagtgtgcaagcttcagaatcagggcacccctctggaggtacatttcccctattttccatgctagctgcagccgatacggactcgatagccacgatagccgatgcccaagcgtacaacaatgggcttatcagacgtgtagtatccggagcctccggtatgcgtgacgtctccgcctacatcttctctcttttcaatgaaaacgagaagcctgggccagccatagagagaaactttggcttgttctacccaaatggtcagaaggtgtatgaggttgactttaggggcggtggcggtggcggagcttgccccacaaagacaagttggtgtgtggcaagaacagatgttgggagtgcagcattgcagtcagcattggactttgcgtgcggtaacggcgcggactgcagcgctatccggcagggcagtgtgtgtttcgaaccaaacaccttggttgcacacgcgtcgtacgcattcaacgactactaccaacgcaagggccaggccagcggcacttgcaacttctctggcgccgcttccatcgtattcaagccatcgccaagcatatgtgatccgaacccaagttggtgcgttgcgaaatcggaggtcggggacgcacaactacaaaatgcactagactatgcatgtggtagctgcgcggactgcagcgccattcaaccaggtgcacggtgctttgatcctgacactaaggtagcacacgcgacctatgcattcaacgatttttaccagaccaccggccgggctagtggatcgtgtgactttgccggtgctgcttctattgtcaaccagcaaccaaaaataggaaactgcgtgctcccaccaaacaatgctgggacagaacaaactgcaattgaagatcaatcgactgcaaacttaccagcaacagcttggcagtga
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| Protein seq | MAFSHLLHALLVAAALPLLLLPRAADAGEIGVCYGRDANNLIDPPAAVSLLKANGISAVRIFDADQTVLDAMANTGIKVMVAIPNADLAAAGQDLRSATDWVTNNVVPYRSRGTLINGVAVGNEVFRQRPELTGMLVSAMRNLHKALENLNLANDVKVSTPIAFDALKQSSPPSAGEFKDEIAQSVMKPMIDFLKQTGSYFMVNLYPYFAYVAQPDKISLEFATFRPNAGVLDGNTGIRYFSLFDAQLDAVYAAINRVSGGSLTVSMARRDGILSVQASESGHPSGGTFPLFSMLAAADTDSIATIADAQAYNNGLIRRVVSGASGMRDVSAYIFSLFNENEKPGPAIERNFGLFYPNGQKVYEVDFRGGGGGGACPTKTSWCVARTDVGSAALQSALDFACGNGADCSAIRQGSVCFEPNTLVAHASYAFNDYYQRKGQASGTCNFSGAASIVFKPSPSICDPNPSWCVAKSEVGDAQLQNALDYACGSCADCSAIQPGARCFDPDTKVAHATYAFNDFYQTTGRASGSCDFAGAASIVNQQPKIGNCVLPPNNAGTEQTAIEDQSTANLPATAWQ
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_07g0017910 | OsARC_07g0017910.01 | Chr07 | 20932572 | 20935546 | - | NAM | ||
| CDS seq | atggcactcactcacctcctctgctccctcctccttgccaccgcattgctgctgctctccatctcccgtacagaggctggcgaggtgggcgtgtgctacgggagggacgcggacgatttgatggatccaccggccgtggtgaatcttctgaaggagaacggcatcacgaaggtgaggatctacgacgccgacccgacggtgctgagatcgctgtccaacacaggcatcaaggtgatggtggcactacccaacaaggaccttgcttctgcaggccacgatcagggaagtgcgctagactgggtgaaaacaaacattgttccgtactataaccagggcacacaaatcaatggtgtggctgtggggaatgaggtgttcaggcaagcacccaacttgacccctcagctgttaccggcgatgaagaatgtgcagacggcgctagcgagactgggccttgccgacatcataaaggtatcaacacccattaattttgatgcggtcaatgtgtcatggccatcatccaagggtgtgtttcaagacagcatcgcccagtcggtaatgagtcccatgatcgatttcttgcaacagaccaactcatatctcatggtcaatttctacccatatattgcctgggctaactctaaaggccagatctcccgcgattacgctacatttggccccaacgccggtgtagtcgatccgtggagccacatcacatactatagtctctttgatgcccagctcgatgctgtttactacgctataaatcaggtttctggtgatagtgtgagggcctcaatggcccaaacaagatgggggcacccgacaccaagggtgcccgtcaaatgttcggaatgtgggcatccctccggtggtcagttccgcaagttgaccacacaagctgatgccgaagtggatgtggctacaaaagctaacgcccaagcattcaacaatggtattatcagacgcgctctgtttggagcctctggtatgcctgatgtctctgtgtacatcttcgctcttttcaacgagaacaagaaggctggagcatctgtagaacgcaacttcggcctgttctaccctaacggtacaaaggtttacgaggttgattttcatggtggtggtatttgtcccaccaaggcgagctggtgcgtggcaaatttagctgtggggaattcccggctgcaggcggcgttggattgggcttgtagtaacggcgcagactgcagcgctatccaacagggcaaaccttgcttcgagccaaacacaatggttgcgcatgcgtctttcgcattcaatgactactaccagcggatgggccaagccaatgggacatgcgactttgctggcgctgcttatattgtcttccaaccatcagaaagcatttgcgacccaaatccaagttggtgtatcgcgaaccctgcagttggggacatgcggctacaggcagccctagattatgcatgcggcagctgtgcagactgcagcgccatccagcccggtgcacggtgtttcgagcctaacactaaggtggcgcacgcatcctacgcattcaacgactattaccagcgtgttggccgagtcagtggctcgtgtgacttcggtggtgctggttccattacctaccaggcaccagagattggaaactgcgtccttccgccaatgcttgaactggacaaagcgtactga
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| Protein seq | MALTHLLCSLLLATALLLLSISRTEAGEVGVCYGRDADDLMDPPAVVNLLKENGITKVRIYDADPTVLRSLSNTGIKVMVALPNKDLASAGHDQGSALDWVKTNIVPYYNQGTQINGVAVGNEVFRQAPNLTPQLLPAMKNVQTALARLGLADIIKVSTPINFDAVNVSWPSSKGVFQDSIAQSVMSPMIDFLQQTNSYLMVNFYPYIAWANSKGQISRDYATFGPNAGVVDPWSHITYYSLFDAQLDAVYYAINQVSGDSVRASMAQTRWGHPTPRVPVKCSECGHPSGGQFRKLTTQADAEVDVATKANAQAFNNGIIRRALFGASGMPDVSVYIFALFNENKKAGASVERNFGLFYPNGTKVYEVDFHGGGICPTKASWCVANLAVGNSRLQAALDWACSNGADCSAIQQGKPCFEPNTMVAHASFAFNDYYQRMGQANGTCDFAGAAYIVFQPSESICDPNPSWCIANPAVGDMRLQAALDYACGSCADCSAIQPGARCFEPNTKVAHASYAFNDYYQRVGRVSGSCDFGGAGSITYQAPEIGNCVLPPMLELDKAY
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| RI | Chr07 | 20928105 | 20928276 | - | OsARC_07g0017910.03 | OsARC_07g0017910.03,OsARC_07g0017910.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.255038 | 0.294452 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0539300 | RBH | 0.958898 | 1.978592 | 0.557179 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g35510 | RBH | 0.644396 | 1.322434 | 0.122133 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0539400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0018130 | RBH | 0.0 | 10.813023 | 0.457711 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0018040 | RBH | 0.555259 | 3.514833 | 0.185651 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0018020 | RBH | 1.783775 | 25.033304 | 1.999873 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0017820 | RBH | 0.0 | 0.086112 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0018030 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0346200 | RBH | 0.301506 | 0.2162215 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0018530 | RBH | 0.0 | 0.477779 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0359600 | RBH | 1.5795655 | 0.1972715 | 0.1006175 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0017770 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0017970 | RBH | 0.0 | 8.920775 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0017850 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0018140 | RBH | 0.0 | 0.576811 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0017880 | RBH | 0.0 | 85.263474 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G017870 | RBH | 0.0 | 2.525003 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0017650 | RBH | 0.0 | 0.0 | 0.000000 |
