Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_07g0010080 | OGI:07030090 | 1/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr07:10556344-10557413 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGACCAGGAGATAATGAAGAAGCACAGCGCGTGGCTTAAGCTGCTCCTCGGGCCCAAGAAGCCGGCGAGGTCGGCGGCGGCGGCGATCCTCGAGACGTGGGCGGGGGACCGGTCGAAGCTGCTCCTCGGGCCCAAGATCGCGTCGGGGTCCAACAGCCGCATCCACCGCGGCATGTACAGGGAGCAACCAGTGGCCGTGAAGATCATGCACGCGCCGGTGGGCGACAACGACGACGACGTGCTGGTCCGGCGTGAGATGGAGGCGCAGTTCGACGCCGAGGTGTCCCTCCTGTCGCGGCTGCGCCACCCCAACGTCGTGCGGCTCATCGCCGTGTGCCGGGAGCCGGAGGTGTACTGGATCATCACCGAGCTCATGCCGCGAGGCACGCTGAGCTCGTACCTGCACGGCCTGGAGCCCTACTCGCTGCCGCCGGAGACCGTCGTCCGCCTCGCGCTCGACGTCGCCCGTGGGATGGAGTACCTCCACGCGCGTGGCGTCGCCCACCGCGACCTCAAGCCGGATAACCTGCTGCTCGACGGGGGCGGCGCGTCAAGGTCGCCGACCTGGGCACGTCCTGCCTCGAGGCCACCTGCCGCGGCGACAAGTGCTCGTCCAAGGCGGGCACGTTCCGGTGGATGGCGCCGGAGATGATCCATGACAAGCGCTGCAACCGCAAGGTGGACGTGTACAGCTTCGGCCTCGTGCTGTGGGAGCTCACCACTTGCCTCGTGCCGTTCCAGAACTTGAGCCCCGTGCAGGTCGCTTTCTCCGTCTGCGACAGGGACGCCAGGCCGCCGCTCTCGCCGTCGTGCCCGCCGGCGATCAACAGCCTCATCGAGAGGTGCTGGTCCACCGAGCCAGCGAGACGGCCCGAGTTCAAGAACATAGTCTCCGTGCTGGAGAGTTACGACCGCTGTCTCCGACAAGGCCTGCCTCTGCTGCCCCTGCCGGAGCCGTCGCCGTCGCCGCTGGCCTCGTTGCTCGGCGTCTTCAAGATCCGTTCCTGCAAAAGCACGACTCGTTCTTCCAATGCCGATCGAAGAATTCATGCTTATAATCTCTGCTAG
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| CDS seq | ATGGACCAGGAGATAATGAAGAAGCACAGCGCGTGGCTTAAGCTGCTCCTCGGGCCCAAGAAGCCGGCGAGGTCGGCGGCGGCGGCGATCCTCGAGACGTGGGCGGGGGACCGGTCGAAGCTGCTCCTCGGGCCCAAGATCGCGTCGGGGTCCAACAGCCGCATCCACCGCGGCATGTACAGGGAGCAACCAGTGGCCGTGAAGATCATGCACGCGCCGGTGGGCGACAACGACGACGACGTGCTGGTCCGGCGTGAGATGGAGGCGCAGTTCGACGCCGAGGTGTCCCTCCTGTCGCGGCTGCGCCACCCCAACGTCGTGCGGCTCATCGCCGTGTGCCGGGAGCCGGAGGTGTACTGGATCATCACCGAGCTCATGCCGCGAGGCACGCTGAGCTCGTACCTGCACGGCCTGGAGCCCTACTCGCTGCCGCCGGAGACCGTCGTCCGCCTCGCGCTCGACGTCGCCCGTGGGATGGAGTACCTCCACGCGCGTGGCGTCGCCGACCTGGGCACGTCCTGCCTCGAGGCCACCTGCCGCGGCGACAAGTGCTCGTCCAAGGCGGGCACGTTCCGGTGGATGGCGCCGGAGATGATCCATGACAAGCGCTGCAACCGCAAGGTGGACGTGTACAGCTTCGGCCTCGTGCTGTGGGAGCTCACCACTTGCCTCGTGCCGTTCCAGAACTTGAGCCCCGTGCAGGTCGCTTTCTCCGTCTGCGACAGGGACGCCAGGCCGCCGCTCTCGCCGTCGTGCCCGCCGGCGATCAACAGCCTCATCGAGAGGTGCTGGTCCACCGAGCCAGCGAGACGGCCCGAGTTCAAGAACATAGTCTCCGTGCTGGAGAGTTACGACCGCTGTCTCCGACAAGGCCTGCCTCTGCTGCCCCTGCCGGAGCCGTCGCCGTCGCCGCTGGCCTCGTTGCTCGGCGTCTTCAAGATCCGTTCCTGCAAAAGCACGACTCGTTCTTCCAATGCCGATCGAAGAATTCATGCTTATAATCTCTGCTAG
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| Protein seq | MDQEIMKKHSAWLKLLLGPKKPARSAAAAILETWAGDRSKLLLGPKIASGSNSRIHRGMYREQPVAVKIMHAPVGDNDDDVLVRREMEAQFDAEVSLLSRLRHPNVVRLIAVCREPEVYWIITELMPRGTLSSYLHGLEPYSLPPETVVRLALDVARGMEYLHARGVADLGTSCLEATCRGDKCSSKAGTFRWMAPEMIHDKRCNRKVDVYSFGLVLWELTTCLVPFQNLSPVQVAFSVCDRDARPPLSPSCPPAINSLIERCWSTEPARRPEFKNIVSVLESYDRCLRQGLPLLPLPEPSPSPLASLLGVFKIRSCKSTTRSSNADRRIHAYNLC |
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| Function | Serine/threonine/tyrosine-protein kinase HT1 [UniProtKB/Swiss-Prot:Q2MHE4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_07g0010080 | OsARC_07g0010080.01 | Chr07 | 10556344 | 10557413 | + | NAM | ||
| CDS seq | ATGGACCAGGAGATAATGAAGAAGCACAGCGCGTGGCTTAAGCTGCTCCTCGGGCCCAAGAAGCCGGCGAGGTCGGCGGCGGCGGCGATCCTCGAGACGTGGGCGGGGGACCGGTCGAAGCTGCTCCTCGGGCCCAAGATCGCGTCGGGGTCCAACAGCCGCATCCACCGCGGCATGTACAGGGAGCAACCAGTGGCCGTGAAGATCATGCACGCGCCGGTGGGCGACAACGACGACGACGTGCTGGTCCGGCGTGAGATGGAGGCGCAGTTCGACGCCGAGGTGTCCCTCCTGTCGCGGCTGCGCCACCCCAACGTCGTGCGGCTCATCGCCGTGTGCCGGGAGCCGGAGGTGTACTGGATCATCACCGAGCTCATGCCGCGAGGCACGCTGAGCTCGTACCTGCACGGCCTGGAGCCCTACTCGCTGCCGCCGGAGACCGTCGTCCGCCTCGCGCTCGACGTCGCCCGTGGGATGGAGTACCTCCACGCGCGTGGCGTCGCCGACCTGGGCACGTCCTGCCTCGAGGCCACCTGCCGCGGCGACAAGTGCTCGTCCAAGGCGGGCACGTTCCGGTGGATGGCGCCGGAGATGATCCATGACAAGCGCTGCAACCGCAAGGTGGACGTGTACAGCTTCGGCCTCGTGCTGTGGGAGCTCACCACTTGCCTCGTGCCGTTCCAGAACTTGAGCCCCGTGCAGGTCGCTTTCTCCGTCTGCGACAGGGACGCCAGGCCGCCGCTCTCGCCGTCGTGCCCGCCGGCGATCAACAGCCTCATCGAGAGGTGCTGGTCCACCGAGCCAGCGAGACGGCCCGAGTTCAAGAACATAGTCTCCGTGCTGGAGAGTTACGACCGCTGTCTCCGACAAGGCCTGCCTCTGCTGCCCCTGCCGGAGCCGTCGCCGTCGCCGCTGGCCTCGTTGCTCGGCGTCTTCAAGATCCGTTCCTGCAAAAGCACGACTCGTTCTTCCAATGCCGATCGAAGAATTCATGCTTATAATCTCTGCTAG
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| Protein seq | MDQEIMKKHSAWLKLLLGPKKPARSAAAAILETWAGDRSKLLLGPKIASGSNSRIHRGMYREQPVAVKIMHAPVGDNDDDVLVRREMEAQFDAEVSLLSRLRHPNVVRLIAVCREPEVYWIITELMPRGTLSSYLHGLEPYSLPPETVVRLALDVARGMEYLHARGVADLGTSCLEATCRGDKCSSKAGTFRWMAPEMIHDKRCNRKVDVYSFGLVLWELTTCLVPFQNLSPVQVAFSVCDRDARPPLSPSCPPAINSLIERCWSTEPARRPEFKNIVSVLESYDRCLRQGLPLLPLPEPSPSPLASLLGVFKIRSCKSTTRSSNADRRIHAYNLC
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0203925 | SBH | 0.000000 | 0.195435 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g10400 | SBH | 0.664086 | 0.518722 | 0.158937 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0203925 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0024420 | SBH | 1.181075 | 38.027531 | 6.161489 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0024470 | SBH | 1.169468 | 25.767380 | 7.155493 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0024340 | SBH | 3.422103 | 69.442955 | 24.799473 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0024840 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0024400 | SBH | 18.590399 | 39.655972 | 24.178427 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0376200 | SBH | 0 | 0 | 0.029779 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0024330 | SBH | 0.0 | 0.072425 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0377800 | SBH | 0 | 0 | 0.129213 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0024180 | SBH | 0.671398 | 1.085003 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0024320 | SBH | 0.873398 | 22.144529 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0024730 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0024500 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0024390 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G024150 | SBH | 1.048504 | 10.925138 | 6.104931 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0024170 | SBH | 2.529446 | 72.625763 | 15.372611 |
