Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_06g0023460 | OGI:06073650 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr06:26946021-26956059 | ||||||||
| Gene Symbol | CYP71K9, OsCYP71K9, T5H, CYP71K7, OsCYP71K7 | ||||||||||
| DNA seq | ttatattgtaggcaagggtacgtggactacaggaataaggacaaggtcatggagccgccgcgtggtgaatcgcatctcctctgtcatgtctaggttctcagcgtgtatcccgctcggcagttcccagttgaaatggtataggaggctcgctaatgtgagctccacattggctagaccaaacgccatgccagggcacatcctccgacctgctccaaatggtgtgtactcaaaatgtgtgcctttaaagtcaacatcactatgctcaaacctctctggaataaactcttcagcttcgtcccagtacttgggatccctaccaatagccgatacgttaacaaacaccgttgctcccttgggtatatcgtatcctaggacttggcacgtgcgtcggcattcccgtggtagcagcaatgatcccggtgggtgtagccggagtgcctccttgatgaccatatgcatgtaattcagtctacatagggtatcttctgtcactttacgatgcccgatgagctctcgtcgtacttcatcttgtgccttctgcatcactttcggattcctcacgagctccgccatgatccaatgcagcgtcgttgctgcggtctcgctgcccccaaccaacatgtcctgtacacacataacacgaagccaaattcattagcgttactacctccgtttcaaaccataggcctattcagatttataacattaggatgtatcatattcggttctagattgctatatattgaggcaagtagtattacatttcctagaaagtgatgtggtatttcgtagttaaaaggtccttactccaattgttgccttgatgctttcactggacaggggaaactgcaggtcgccttccctctggatcctcaagagcacgtcgagcaagtcgttgtcgtcgtcggcggcggctgatctgttctcttggtgctcctggatgatggcgtccaggaacgcgaccatgtcccggtgatgctgcttcatccgacgcggcattcgactgaggagcatggcgaggcgcgacgacgggtagagatccggcagtgcaggcttggcgaacagcttgaggccgcgctccagcatcgccaagaacgcgtcgcggtccctgaaccgatcgcccatgatggcgcgcaccgacgagtcggcggcgtgcgccgacagcagctcgctcaggttgacggcctgccccggcgacgccgccgccaccgcccggagtaggcggccggcctcctcctcgcggactggtcggaaggactggacgcgccgcgcgctgagcagctcgacggtgcagatcttgcggagctccctccaccggtcgccgtacggcgcgaagatgatgccctcgccgccctccgggaagacgagccgcgccatccggctcatgggccgcgtggcgaagtcgaggtcgcgcgtcttcatcacctcgcgcgccgcctccgcggaggacgcgacgacgacggggagctcgccgagccggagcagcatgagcgggccgtggcgccgcgccaggtcgcgcatggcgacgtgcgggagcgcgcccaccaggtggtggaggtggccgatcaccggcagcccccacggcgacggaggcagccggacgtcgccgccgcgccggcgcgcgacgcggttgaagtagacgaaaggcacgacggctagagggacaaggacgagcacgtagaccagaaacgccgccatggcttaaactgaaggagctgcagcctgtctgcaggtatgtgtcaaattttccaaggtaatactgatatatactagtggtaatcatgtgatgacatcgtatctactacgagtaattatctaggagaattaggaaatgataactgacaagtcgttgacctaccatgaatctgtgggctatgagatactggcactgacttcacctttgaaaaaacaaggccgtttcttgcagaagggatcacagagagagattgtagccgctatagtttggaatattcggagaatccatcgtcatagaatttagaaaataaactagaagctaagaatctggattttctagctttttttttatacttagaagctgacgcctaagttacaatccaaatgaaaatgtgctaacatatataggaatgtgagatcactgcagttgtcccaaatgttgataaaaactactatcaagaaaagaatcaaatagtgcgagatttaaaagccaataagccatgagctctcacttcgcttgttctgcttcagaagatcagacgcagggttttagcacgaagccacgaaacaactgaacatcgtacactgagatgctgactcccaatgttttcaggttttactccgaatattaactagggtgtttttggacctcagatctttgcagttaatttgctccaaatcagaattaattttccctccactgaactctggtttttatcagtttctgagtaagaaaagaaaccgatgatgcttttacccttgcgtttagtgatgttgagaaccttctgtgttctactttaatctatttgtgtttctagagcccatctttttttttagttgacacgcctattggtaacttcaagttgacattaggcctattgaactacaaatgtgatattgaccttggagtaaatttgcgcagatctgatgactgatgattatctataagttcgagttcgacatgaatgacgtggccatcaagtacgtaagtttcagtactgtcatttgttttggagaagacgtttactatttcatcagctcaacgaataataaaccactccatgaggcaaaaccttattaataaagcttcaatgtacaatgtcatataacaattaagaaatcaatatcttaaaaagaaagaattcagatatgcgaattagacatcattctaaagtaacatacccttcatcccaaaatatagtactccctccattttttaattgatgacgctattaacttttgaacacatatttgactattcgtcttattaaaaaaattatgtaaatgcataagatataaatcatacttaaactattattagtgataaaacaacacaacaaaataaattgtaattacataaaatttttaaataaaactaatggtcaaacgtgtgcccaaaagtcagcggcaaaacggatgtagtaccttactactggattagacacaacctagctattaccacaaatattgatataagatgtatttcgagataaatggagtatatactccggtagcatttatccatgccttctaatttctgtggctaaagcacgcctaaaccaaaaattagaatatcatcagttcatcactaatctgcgaaatcataagtggagcaacgaacggctcttttagttcggttggtgcagaaccatggctcccgttgctctgctttatcctgtcgagtaatcgcgttcgcagtttacggccttgtgtcgtgtaggccatttatggggcttggattcgtttgcacacgttggaaataggtgggcccctggtgggccatttatgggctcattttgcgtcatttattacaaggcttagtatgggcctttcgactcatagtttcttaggagaagtccattttgattccatcaactataagctgaatctgttttgtatccctcaactgtaaacaggtaaattgcatctctccactattaataccagtttaatttgtctccccaagcagtttggacatcgatcatgtcacgtggtgcttaagtggcacgttgaactagtctttatcctacgtgggtatcatgaaaacaaaaaaagcaatgaaacccacatgtaaatcccgcatctcatcttctttcttccctctatcatctcttccgcggtggcgacggatggggtgtccgtcggtcatgccagcatcctctatagcagatgcatagcctgtcttgctcacctcagtgtcccctctgtacagttttgtcgtcatcgacgactccaccaacatgaagatctcccatgtcgtcatgctgcaccccaccacgcccgttagttatcagcgctttgggcggagcctaaatggaggcacaacagtctctagatcctagaaggggagctggcagtaggggcaaaagattgcgagctattgttgctgcttcttttccgcagtcatccaccacgacgatgacgagcagccacggctttctcaagccccaaagcatcccccacctgcgcgcgttttctctctctacctgaagttcagcttgccgcttgccgcttgccaaggaggaagagggcagctaaataagaggaagaaaggaggggtacttcactgacatgtggatcccgttatatttttactctctcttttttcctcaagtactagccctaaaaccagccagtctaactaaggttagtgcgtcacgccagacaaaaccaccctgaaaataaccaagggagtcattttgtattggttttaatacttgggggtctgatatacccaatgttgtgattgaacgatacacataagattccggaaataattgagagggtcaaaatagactttttcgtttttcagtccggtgatgagcaataattgcatgtggtgatgaatcatgaactgatgatgaccatcgtgtatactgtgcaagagtgttttattatcaaaacttcagaaactgctaaagccacctttccttttcatgaaggtatatcccctcaagttggtaaggaccatgtgtgaatgtccttgtatgaaactttggttgtttgaccttcaattaatgtgttttttactcctttgttaccattctttcttgcattggtaatactgtataaccaagagttatgggaatcctaactagaatttagggtcttaaaattttcatccctccaaaagattggttaaaattggctttctaaaactaaaaggtgccccctagaaaactatcaacaaaaattatctaagagtgtatcaacagaaatttaaggtgggtgttagatgtcaatggtgctgtggtagatgccatcgtcggtggccttggcttagtctgggatgagctcggcgatgctctgaaacctgcactggtggagaaatcatctttactcctggtttataaccccctgtaaatccgggactaaaaatcgctatctttagtcccgggtgaaataactgggagtaaagatcgatctttagtcctggttggtgtttagtcccggttggagactaaagagacgatagaggtagtcccggttggtccattttccttttattttctcccaaatcgagttggatatatatacccaaatcaaaaaccaaatccccaaatctgagtgccatgcatataaccaaatccccaaatcaatgtaacataccaaatcattcacatcacaaatacaaatcctaaatcttacaaaccatcacaaatcttaaacaaattacacacaaaccaaatgcatcacagatcgattatacatctcagatccatgcaatgaatcacaaatttgtaataaaagaaattatacatctctcaaatcacaaattattaaaaaaacagagagaaccggtgccgccgcttgccatggccgcgcgcgcttccccgccggcagcgtcgcccgccgcccgcgccgctcgccagttcttcagccgtcggatgtgaggaggagaggggaggaggaggagggggaggagaggaaggagctagatctaaggaggaggaggaggaggaggaggatctgatgaggaggaagtaatggtctgggacttaaccgatcagatgtgggagagaaatatttactcccggttagagttttcaaacgggagtaaatatttttttgatctttactcccagttggtgttaccaactgggactaaagtggtgatctttagtcccggttggtgacaccaaccgggactaaggccctgtttgtttcagcttaggattattataatctggattattaggagtaaattaaaataaacagatagcttattatgatagattattacaatctataagccaaatcactataatctagtaatccactctaactgtgctttttttagattattgggttgctaacacctaacaaccagctaatgatccagagaaacaaacagctaacaactaattctatgtcggcttattataattcagcttatagtaatttgtctcaataatatagattacaataatcttaagctgaagcaaacaaggcctaaagattctcgaccccctgatatgcctctgacaggctatgaaccatctttactcccggttggtgttaccaaccgggactaaagatcaatatttttataaccaggactaaaagcaaccttttgttctggttctttttggaaccgggattattgttgattttgccagaccgaccaaagatggtttagaacctagaggttgagaggtatccgtcgatgagcttggccactgttctaactgcatgagctcgcttgatgcatgcgtcgaccagctgggcttcgtcgacgtttatctccggcgtccggcgaggcggcgaacagtcaccaacatgttcggcgccgatcgatgaactgctccagcatctgctccatgtatgcagtccacgttgttgagcatctccacaaagttgccgatcgatgttggggatcaggaggtcctcaagcgtcgtctcagcacgcgccacgccacgccacaccaacgtgtaggatcatgtcggtgcggcgaagtccgagcacgcatgaaccttgtcgtggtgatgcccctctcgactgggagcagcgtgacgatctccttcacgagaaaaaccctctgcttgcacgtccaagagcttggctcccgactcgccgcggtggccgtgcgccgccacgccgatgttaccgaagatgagccgcacgggaatatttcaccaagcactcacagaaaagcggtgtgtggtggattgggagcaaaatctcttccctataagaagtggaaaacgaatcatccggatttgggagtttgatcggttgggagtgcaggtagggagtctattggaattggtttttgaaaaaaaaggattctcaaattctctcatagggaatgatatggaaactcttggtgatgctcaatgtcctatctctcttctcttcatattcctagattttccttttcttttagaaaaagacaagtttattttttattttaatctccttttcaaagaagtttactgctagactttaaacttttaaataaaccgaaccatacagatacacgagctatccaactagtcgtattatacacgaatagatcgttattcatctgttggaagttttcttgagggcaaaacatttaaattttggatcgttggatttgttttgagattcgtgcaaataggaggcaaggttgggaaaaataatgctaagtgttgggacatggaccacaggaacaagtaaaagttggtctggcgcagtataaccgaacacttcaggcccctaattttctgtccggtccgatgatgagtctaaagtgttcggttatataaagacttgctaacactatctcaataatataccttgtatgggccttcgtttatttgtgaacagttgcatgtggtgatgaactgatgaccaacatttatcttgtctcagagtggcacaagataccaataattgttcaaattttttaataccgcaaccccataataagctgctaaaatcatctttctttttcagggaggtatcccctcaagttgctaattaaggacaatgtgtggatgtccttgtatgaaactttggttgtttgaccttttcaattaaggcagtccaagtatttttaatgttttatattcattggttgctatacccatactttcttactttcttgtactggtatgttggcctatcccacgtgttgagccttctctttcatattactagatccccccctctctctctctctcacacacacacacacaaaataactctatttttcgacttcaaatctttttttcaaagaagttcgccgttggactttaaacttttaattaaatcgagccatacaagtacaggagctatcccaactagtagttgtatacaccactatgatgaggctactggcaatggaatatggaccacaggaacaagtaaaaggtcatggagccgtcgggcactaaccaccatctcctccgtcatgtctagatccgcagtatccatcccatctggcaattgccagtcgaaatggtacaggaggcttgcgagcataagttctacatttgccagaccaaatgcgatgccagggcacattcttcgtcctgccccaaatggtgtgtactcaaagtttgtccccttaaaatcaatgttgctatcctcaaacctctcagggataaattcctcgggttcatcccaatactgagggtccctgctaatcgcccacgcgttcacaagcaccattgctcctttgggcacgtcgaatcctaagacttggcaggtgtttctacactcccgtggcagtagtagaggcacaggaggatgcagccgcaacgcctccttgatgacaaggtgcatgtagttcaagttgcttattgcatcttcagttactctgtcacgaccggcaagtgtttgtcgtacctcatcttgtaccttgtgcatcactcttgggtttcttatgagctcggccatgatccattgcaacgccgtccccgcagtctcgctgcctcccgcaaacatgtcctgtacaaataataggaagcaaaattcattagtgttaaatgtgacaaagtaatatcatacttcctccgtttcacaatgtaagtcgttctagcattttccacattcatattgatgttaataaatttaaacatatatatctatctagattaattagtgttacatgtgacaaagtaatatcataattcttagggtgcctcgtttgactttgattatttagcagattgttaacgcggattatctagttaattatatgaatgaattaaatattttaataaattagcttaaccaataatttaaaacaagtttttattgtagtgaaaaaaatgttttttcaagataaaatattttgtaaaaaatatggagtatgatttggtaaataagctagaaagaacactaaaacacggtctaattaaagtgcttactccaaccgttgtcttgattctttcagtggacagagggaactgcaggtcaccttccctctggatcctcaggagcacgtcgagcaagtcctccttgtcgtcgccggcgccggcggctcggttctcttggtgttcccggatgatgacgtccgtgaacgcgaacgcctcccgccggtgctgcatcatccgccgcggcatgcggctgagccacatggcgaggcgcgacgacgggtagaggtccggcaaggtgtgcctggcgaacagcttgagccctcgctccaggagcatcaggtacttgtccctgtccctgaaccggctcccgatgatggcgcgcaccgccgagtcggcggcgtacgccgacagcagcgcgctcaggttcacggcggcctgcgccggcggcgacgccgacgacgtcgccgccacggcgcggagcaggcggccgacctcctcctcgcggacggcgcggaaggactggacgcgtcgcgcgctgagcagctcgacggtgcagaccttgcggagctcccgccactcgtcgccgtagggcgcgaagatgatcccctcggtgcccgcggggaagacgagccgcgtcatccggctcatgggccgcgtggcgaactcgatgtcgcgcgtcctcatcacctcgcgcgccgcctccgcggaggacgccaccacgacggggagctcgccgaggcggagcagcatgagcgggccgtggcgccgcgccaggtcgcgcatggcgtggtgcgggagcgcgcccgccaggtggtgcaggtgcccgatcaccggcagcccccacggcgacggcggcagccgcccgccctcgccgcgccggcgcgccacccagccgaagtagacgagaggcacgatggcaaggagagcaacgacgagcaggtaggccagaacagacgacgccgccgccgccatggctatggcttttgctcctttggactatcgaatgggtggattgaactgaaggagctcagaagct
More
|
||||||||||
| CDS seq | atggcggcggcggcgtcgtctgttctggcctacctgctcgtcgttgctctccttgccatcgtgcctctcgtctacttcggctgggtggcgcgccggcgcggcgagggcgggcggctgccgccgtcgccgtgggggctgccggtgatcgggcacctgcaccacctggcgggcgcgctcccgcaccacgccatgcgcgacctggcgcggcgccacggcccgctcatgctgctccgcctcggcgagctccccgtcgtggtggcgtcctccgcggaggcggcgcgcgaggtgatgaggacgcgcgacatcgagttcgccacgcggcccatgagccggatgacgcggctcgtcttccccgcgggcaccgaggggatcatcttcgcgccctacggcgacgagtggcgggagctccgcaaggtctgcaccgtcgagctgctcagcgcgcgacgcgtccagtccttccgcgccgtccgcgaggaggaggtcggccgcctgctccgcgccgtggcggcgacgtcgtcggcgtcgccgccggcgcaggccgccgtgaacctgagcgcgctgctgtcggcgtacgccgccgactcggcggtgcgcgccatcatcgggagccggttcagggacagggacaagtacctgatgctcctggagcgagggctcaagctgttcgccaggcacaccttgccggacctctacccgtcgtcgcgcctcgccatgtggctcagccgcatgccgcggcggatgatgcagcaccggcgggaggcgttcgcgttcacggacgtcatcatccgggaacaccaagagaaccgagccgccggcgccggcgacgacaaggaggacttgctcgacgtgctcctgaggatccagagggaaggtgacctgcagttccctctgtccactgaaagaatcaagacaacggtacaagatgaggtacgacaaacacttgccggtcgtgacagagtaactgaagatgcaataagcaacttgaactacatgcaccttgtcatcaaggaggcgttgcggctgcatcctcctgtgcctctactactgccacgggagtgtagaaacacctgccaagtcttaggattcgacgtgcccaaaggagcaatggtgcttgtgaacgcgtgggcgattagcagggaccctcagtattgggatgaacccgaggaatttatccctgagaggtttgaggatagcaacattgattttaaggggacaaactttgagtacacaccatttggggcaggacgaagaatgtgccctggcatcgcatttggtctggcaaatgtagaacttatgctcgcaagcctcctgtaccatttcgactggcaattgccagatgggatggatactgcggatctagacatgacggaggagatggtggttaccgtcgtgcctttcgtctacttcaaccgcgtcgcgcgccggcgcggcggcgacgtccggctgcctccgtcgccgtgggggctgccggtgatcggccacctccaccacctggtgggcgcgctcccgcacgtcgccatgcgcgacctggcgcggcgccacggcccgctcatgctgctccggctcggcgagctccccgtcgtcgtcgcgtcctccgcggaggcggcgcgcgaggtgatgaagacgcgcgacctcgacttcgccacgcggcccatgagccggatggcgcggctcgtcttcccggagggcggcgagggcatcatcttcgcgccgtacggcgaccggtggagggagctccgcaagatctgcaccgtcgagctgctcagcgcgcggcgcgtccagtccttccgaccagtccgcgaggaggaggccggccgcctactccgggcggtggcggcggcgtcgccggggcaggccgtcaacctgagcgagctgctgtcggcgcacgccgccgactcgtcggtgcgcgccatcatgggcgatcggttcagggaccgcgacgcgttcttggcgatgctggagcgcggcctcaagctgttcgccaagcctgcactgccggatctctacccgtcgtcgcgcctcgccatgctcctcagtcgaatgccgcgtcggatgaagcagcatcaccgggacatggtcgcgttcctggacgccatcatccaggagcaccaagagaacagatcagccgccgccgacgacgacaacgacttgctcgacgtgctcttgaggatccagagggaaggcgacctgcagtttcccctgtccacaacgacgctgcattggatcatggcggagctcgtgaggaatccgaaagtgatgcagaaggcacaagatgaagtacgacgagagctcatcgggcatcgtaaagtgacagaagataccctatgtagactgaattacatgcatatggtcatcaaggaggcactccggctacacccaccgggatcattgctgctaccacgggaatgccgacgcacgtgccaagtcctaggatacgatatacccaagggagcaacggtgtttgttaacgtatcggctattggtagggatcccaagtactgggacgaagctgaagagtttattccagagaggtttgagcatagtgatgttgactttaaaggcacacattttgagtacacaccatttggagcaggtcggaggatgtgccctggcatggcgtttggtctagccaatgtggagctcacattagcgagcctcctataccatttcaactgggaactgccgagcgggatacacgctgagaacctagacatgacagaggagatgcgattcaccacgcggcggctccatgaccttgtccttattcctgtagtccacgtacccttgcctacaatataa
More
|
||||||||||
| Protein seq | MAAAASSVLAYLLVVALLAIVPLVYFGWVARRRGEGGRLPPSPWGLPVIGHLHHLAGALPHHAMRDLARRHGPLMLLRLGELPVVVASSAEAAREVMRTRDIEFATRPMSRMTRLVFPAGTEGIIFAPYGDEWRELRKVCTVELLSARRVQSFRAVREEEVGRLLRAVAATSSASPPAQAAVNLSALLSAYAADSAVRAIIGSRFRDRDKYLMLLERGLKLFARHTLPDLYPSSRLAMWLSRMPRRMMQHRREAFAFTDVIIREHQENRAAGAGDDKEDLLDVLLRIQREGDLQFPLSTERIKTTVQDEVRQTLAGRDRVTEDAISNLNYMHLVIKEALRLHPPVPLLLPRECRNTCQVLGFDVPKGAMVLVNAWAISRDPQYWDEPEEFIPERFEDSNIDFKGTNFEYTPFGAGRRMCPGIAFGLANVELMLASLLYHFDWQLPDGMDTADLDMTEEMVVTVVPFVYFNRVARRRGGDVRLPPSPWGLPVIGHLHHLVGALPHVAMRDLARRHGPLMLLRLGELPVVVASSAEAAREVMKTRDLDFATRPMSRMARLVFPEGGEGIIFAPYGDRWRELRKICTVELLSARRVQSFRPVREEEAGRLLRAVAAASPGQAVNLSELLSAHAADSSVRAIMGDRFRDRDAFLAMLERGLKLFAKPALPDLYPSSRLAMLLSRMPRRMKQHHRDMVAFLDAIIQEHQENRSAAADDDNDLLDVLLRIQREGDLQFPLSTTTLHWIMAELVRNPKVMQKAQDEVRRELIGHRKVTEDTLCRLNYMHMVIKEALRLHPPGSLLLPRECRRTCQVLGYDIPKGATVFVNVSAIGRDPKYWDEAEEFIPERFEHSDVDFKGTHFEYTPFGAGRRMCPGMAFGLANVELTLASLLYHFNWELPSGIHAENLDMTEEMRFTTRRLHDLVLIPVVHVPLPTI |
||||||||||
| Function | Cytochrome P450 71D11 (Fragment) [UniProtKB/Swiss-Prot:O22307] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_06g0023460 | OsARC_06g0023460.01 | Chr06 | 26946021 | 26956059 | - | NAM | ||
| CDS seq | atggcggcggcggcgtcgtctgttctggcctacctgctcgtcgttgctctccttgccatcgtgcctctcgtctacttcggctgggtggcgcgccggcgcggcgagggcgggcggctgccgccgtcgccgtgggggctgccggtgatcgggcacctgcaccacctggcgggcgcgctcccgcaccacgccatgcgcgacctggcgcggcgccacggcccgctcatgctgctccgcctcggcgagctccccgtcgtggtggcgtcctccgcggaggcggcgcgcgaggtgatgaggacgcgcgacatcgagttcgccacgcggcccatgagccggatgacgcggctcgtcttccccgcgggcaccgaggggatcatcttcgcgccctacggcgacgagtggcgggagctccgcaaggtctgcaccgtcgagctgctcagcgcgcgacgcgtccagtccttccgcgccgtccgcgaggaggaggtcggccgcctgctccgcgccgtggcggcgacgtcgtcggcgtcgccgccggcgcaggccgccgtgaacctgagcgcgctgctgtcggcgtacgccgccgactcggcggtgcgcgccatcatcgggagccggttcagggacagggacaagtacctgatgctcctggagcgagggctcaagctgttcgccaggcacaccttgccggacctctacccgtcgtcgcgcctcgccatgtggctcagccgcatgccgcggcggatgatgcagcaccggcgggaggcgttcgcgttcacggacgtcatcatccgggaacaccaagagaaccgagccgccggcgccggcgacgacaaggaggacttgctcgacgtgctcctgaggatccagagggaaggtgacctgcagttccctctgtccactgaaagaatcaagacaacggtacaagatgaggtacgacaaacacttgccggtcgtgacagagtaactgaagatgcaataagcaacttgaactacatgcaccttgtcatcaaggaggcgttgcggctgcatcctcctgtgcctctactactgccacgggagtgtagaaacacctgccaagtcttaggattcgacgtgcccaaaggagcaatggtgcttgtgaacgcgtgggcgattagcagggaccctcagtattgggatgaacccgaggaatttatccctgagaggtttgaggatagcaacattgattttaaggggacaaactttgagtacacaccatttggggcaggacgaagaatgtgccctggcatcgcatttggtctggcaaatgtagaacttatgctcgcaagcctcctgtaccatttcgactggcaattgccagatgggatggatactgcggatctagacatgacggaggagatggtggttaccgtcgtgcctttcgtctacttcaaccgcgtcgcgcgccggcgcggcggcgacgtccggctgcctccgtcgccgtgggggctgccggtgatcggccacctccaccacctggtgggcgcgctcccgcacgtcgccatgcgcgacctggcgcggcgccacggcccgctcatgctgctccggctcggcgagctccccgtcgtcgtcgcgtcctccgcggaggcggcgcgcgaggtgatgaagacgcgcgacctcgacttcgccacgcggcccatgagccggatggcgcggctcgtcttcccggagggcggcgagggcatcatcttcgcgccgtacggcgaccggtggagggagctccgcaagatctgcaccgtcgagctgctcagcgcgcggcgcgtccagtccttccgaccagtccgcgaggaggaggccggccgcctactccgggcggtggcggcggcgtcgccggggcaggccgtcaacctgagcgagctgctgtcggcgcacgccgccgactcgtcggtgcgcgccatcatgggcgatcggttcagggaccgcgacgcgttcttggcgatgctggagcgcggcctcaagctgttcgccaagcctgcactgccggatctctacccgtcgtcgcgcctcgccatgctcctcagtcgaatgccgcgtcggatgaagcagcatcaccgggacatggtcgcgttcctggacgccatcatccaggagcaccaagagaacagatcagccgccgccgacgacgacaacgacttgctcgacgtgctcttgaggatccagagggaaggcgacctgcagtttcccctgtccacaacgacgctgcattggatcatggcggagctcgtgaggaatccgaaagtgatgcagaaggcacaagatgaagtacgacgagagctcatcgggcatcgtaaagtgacagaagataccctatgtagactgaattacatgcatatggtcatcaaggaggcactccggctacacccaccgggatcattgctgctaccacgggaatgccgacgcacgtgccaagtcctaggatacgatatacccaagggagcaacggtgtttgttaacgtatcggctattggtagggatcccaagtactgggacgaagctgaagagtttattccagagaggtttgagcatagtgatgttgactttaaaggcacacattttgagtacacaccatttggagcaggtcggaggatgtgccctggcatggcgtttggtctagccaatgtggagctcacattagcgagcctcctataccatttcaactgggaactgccgagcgggatacacgctgagaacctagacatgacagaggagatgcgattcaccacgcggcggctccatgaccttgtccttattcctgtagtccacgtacccttgcctacaatataa
More
|
|||||||
| Protein seq | MAAAASSVLAYLLVVALLAIVPLVYFGWVARRRGEGGRLPPSPWGLPVIGHLHHLAGALPHHAMRDLARRHGPLMLLRLGELPVVVASSAEAAREVMRTRDIEFATRPMSRMTRLVFPAGTEGIIFAPYGDEWRELRKVCTVELLSARRVQSFRAVREEEVGRLLRAVAATSSASPPAQAAVNLSALLSAYAADSAVRAIIGSRFRDRDKYLMLLERGLKLFARHTLPDLYPSSRLAMWLSRMPRRMMQHRREAFAFTDVIIREHQENRAAGAGDDKEDLLDVLLRIQREGDLQFPLSTERIKTTVQDEVRQTLAGRDRVTEDAISNLNYMHLVIKEALRLHPPVPLLLPRECRNTCQVLGFDVPKGAMVLVNAWAISRDPQYWDEPEEFIPERFEDSNIDFKGTNFEYTPFGAGRRMCPGIAFGLANVELMLASLLYHFDWQLPDGMDTADLDMTEEMVVTVVPFVYFNRVARRRGGDVRLPPSPWGLPVIGHLHHLVGALPHVAMRDLARRHGPLMLLRLGELPVVVASSAEAAREVMKTRDLDFATRPMSRMARLVFPEGGEGIIFAPYGDRWRELRKICTVELLSARRVQSFRPVREEEAGRLLRAVAAASPGQAVNLSELLSAHAADSSVRAIMGDRFRDRDAFLAMLERGLKLFAKPALPDLYPSSRLAMLLSRMPRRMKQHHRDMVAFLDAIIQEHQENRSAAADDDNDLLDVLLRIQREGDLQFPLSTTTLHWIMAELVRNPKVMQKAQDEVRRELIGHRKVTEDTLCRLNYMHMVIKEALRLHPPGSLLLPRECRRTCQVLGYDIPKGATVFVNVSAIGRDPKYWDEAEEFIPERFEHSDVDFKGTHFEYTPFGAGRRMCPGMAFGLANVELTLASLLYHFNWELPSGIHAENLDMTEEMRFTTRRLHDLVLIPVVHVPLPTI
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_06g0023460 | OsARC_06g0023460.02 | Chr06 | 26953934 | 26956037 | - | IsoSeq | ||
| CDS seq | tccacccattcgatagtccaaaggagcaaaagccatagccatggcggcggcggcgtcgtctgttctggcctacctgctcgtcgttgctctccttgccatcgtgcctctcgtctacttcggctgggtggcgcgccggcgcggcgagggcgggcggctgccgccgtcgccgtgggggctgccggtgatcgggcacctgcaccacctggcgggcgcgctcccgcaccacgccatgcgcgacctggcgcggcgccacggcccgctcatgctgctccgcctcggcgagctccccgtcgtggtggcgtcctccgcggaggcggcgcgcgaggtgatgaggacgcgcgacatcgagttcgccacgcggcccatgagccggatgacgcggctcgtcttccccgcgggcaccgaggggatcatcttcgcgccctacggcgacgagtggcgggagctccgcaaggtctgcaccgtcgagctgctcagcgcgcgacgcgtccagtccttccgcgccgtccgcgaggaggaggtcggccgcctgctccgcgccgtggcggcgacgtcgtcggcgtcgccgccggcgcaggccgccgtgaacctgagcgcgctgctgtcggcgtacgccgccgactcggcggtgcgcgccatcatcgggagccggttcagggacagggacaagtacctgatgctcctggagcgagggctcaagctgttcgccaggcacaccttgccggacctctacccgtcgtcgcgcctcgccatgtggctcagccgcatgccgcggcggatgatgcagcaccggcgggaggcgttcgcgttcacggacgtcatcatccgggaacaccaagagaaccgagccgccggcgccggcgacgacaaggaggacttgctcgacgtgctcctgaggatccagaggga
More
|
|||||||
| Protein seq | STHSIVQRSKSHSHGGGGVVCSGLPARRCSPCHRASRLLRLGGAPARRGRAAAAVAVGAAGDRAPAPPGGRAPAPRHARPGAAPRPAHAAPPRRAPRRGGVLRGGGARGDEDARHRVRHAAHEPDDAARLPRGHRGDHLRALRRRVAGAPQGLHRRAAQRATRPVLPRRPRGGGRPPAPRRGGDVVGVAAGAGRREPERAAVGVRRRLGGARHHREPVQGQGQVPDAPGARAQAVRQAHLAGPLPVVAPRHVAQPHAAADDAAPAGGVRVHGRHHPGTPREPSRRRRRRQGGLARRAPEDPEG
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.153229 | 0.105208 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0641800 | RBH | 2.521651 | 1.638947 | 5.546000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g43430 | SBH | 0.896984 | 1.054292 | 0.395440 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0641600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0023910 | RBH | 0.433880 | 0.0 | 0.223596 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0023710 | RBH | 0.150415 | 0.0 | 2.182080 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0023890 | RBH | 1.535936 | 0.0 | 1.516414 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0006370 | RBH | 0.011247 | 0.020465 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0023920 | RBH | 1.217959 | 2.052969 | 1.587025 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0409700 | SBH | 0.0079535 | 0.027835 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0023400 | SBH | 0.172572 | 0.0 | 0.292555 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0391000 | SBH | 2.740199 | 1.682734 | 0.5640175 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0023870 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0023790 | RBH | 0.297153 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0023470 | RBH | 0.403470 | 1.452883 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0024120 | SBH | 0.0 | 0.141510 | 0.813795 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0023710 | RBH | 0.076374 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G023530 | SBH | 0.344035 | 0.000000 | 0.634839 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0023730 | SBH | 0.818922 | 0.000000 | 0.450842 |
