Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsARC_06g0018050 | OGI:06055070 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr06:20670423-20675541 | ||||||||
Gene Symbol | OsDJ-1E, DJ-1E | ||||||||||
DNA seq | taccatcatcatataccccccccccaacccaaaggtgcaatatccatctctttttattgcatttgtacggttgtacacataacaagacgtcgtgttattgtggaagagaaagccaaaaaaaaggattacgaagtgctttccaccacaccagctacgagcaaaaggatgcctcatattcagagtctgactatggtgttgtcttacacgtagtatgtaacaacacaactcacatgaagaccatggttttggcgagctcgacggccctctcccgaccaaacagcttctccacgatggcgagagagaactccatggatgtgcctggaccttggctggtgattaggttgccatcaacgacaaccctgttcttgcattcgctttggtccgagagcttgttccacataccaggaaaggatgtagccttctttccctgatgcaaaaacatgttacataccagtcaaaaaagatttgtcttcccagtaaaagaacaggtgtttctgcatgtttgcaccacaaggatttatgttcatcgcatgatagacagctgtatataccttcagcaggccatgtggttcaagggcgattgctggcgaggcacatatagctccatatagcttgtttgcctcagcttgcttcttgatcagaccaatcagtttatctgactttgcatatgcttgggcaccaccaagaccaccctacagaaaacatggaaggtcatttaaccagcaagctagattataaattattagacattaaattaatctaaagtccaacgttcccttgaaatacttcttgaagtccatttttcaccttaacattcaaaaaacagttgttttcgctcttaaattccaaacgagacaaacaccttgaaccatattccatcaccttataattaatatggcagtggtttttgcaaatttagacatatatggatacatgttttgttggtgtagaactgtagacaccacgtggttgagtacacatcaatgaaactcaactaatagttcaaatcagcaaaaactaccaccatattaaccaaatccacaatggaatagggtggagtgttttctgtctgctttcagatttttttttttttggggggggggtgcaaatatctgttatttagttaaggtcaaaattgaaatacccattgattcactaaacttactggtaacaaaatgagatcatattgctgcttaagagcatcatccaacagaacatcagcaaccatcttcactttcctggatgcaacaatctccaaagtttcctccaaggacgcaacgacaacatttgctttcgcccttctgaggatgtcgattatcatagttgcttccatctcctctgtcccattagcaattggtacaagaatctgcagcacaagaacaagatcttgctggtgaaaccaagcagcaacacatagtttgaacatgtaagctgttactccatgtttaagccaatgacaaaaatgatagaaagcagagaagcaacaagcgtaagttcacctaaataatcacatgtaacatcaaacctgcaaaataacttcaatcgattgatggtccacaaaagagcattttaattccttgacagtagctactaggatttatctttaatcatgtgctaaatccttaacaaacataaatcccaactcacatccctcctttcatattattaatccagctagacatactatatttcatccaacaaactcttgaaagtaaccgacaaactacatgcatcagtacccagccctcatcttaaatctatcaaatctagggatttagcatcactaagaacgcagtgaatgaaaagagttatgaagaggttttgccatttcaagatgacttcccttctcttgtcattaaattgcacagtttaccatatactgccttatcctacctcttggtatttaggaagctttactagaaaacttgcccattttcaccaaacatagcagactacaaattgttactccaggcaacataaaattttatatagtgtatacattgccatgaaacaaaagaaaatgagtgctacatgtaacaagtagtttccatactgaactttgaatacctgaggtgtttcaccaacattccaactagttgaattcaactctttcaatgagaactccacaccatgctggggccgcatgaccttaaaagatgtaagcactaaattaaatgcaagcatcagctgtggaaaatatgtaaacactactgaaaaaattacaaacccgaaaaaacaaaacagcattacaagtatcatagagaaaagctactcaatcgaaattaacctttgcagtccatgtgtgaaaaaagtacttcaatgtacgaattttataaaaacaacacattgaagaaatttcaaatgcaactatagccagttttgactaggaataagatggcagggagcaaaggctttttaaggccaattagtttctacatatcccaaaatggccatagtttcaaatagaatgttttctagttttagcataaactataatacctcaagttagaagatagaaatttcatcatgattcaccacatcaaaaaatactaatgagtcaaaatcttcatctcaagaatgatatcaaacaaaagtagaatgaagttgcatggaaaagtctgcgatttaagatttgatgcaaatggtttctcatgcatgacaaggtaaatgtatttcaattaattctgcatgatgaagcataaattagcacataagatgatgaacacgaatgtcatccgtgcaatatccaaacttcaaattattagtcaaagcaggcacactacacttctacgctaaacagcagtctaataaacttcaaataagaaaccacagagtaaagttttctctaaaatgcagaatgcaaatatttacctccaaattattcttttcaaatgcctttctgcaatggaaatataagaaaacgcattcctaacaactgtatgcaatccaatgttcaaaacgattcctaccattggaccagcaacttcatcagctttttctttgccatataattgttcgaccaaaacaacagaatactccatggccgttcctggtcctcgactggtcacacagttcccatcaatctgcaccctcgattctacagtattgacctctgaaggaagtttatccatgaatgaaggataacaagttgcctgtcacaaaaggcaaaacaagcttcttagaattgaaaagtaataatattgtgtatgcaagagccaactaatgatgaaaagaccaccttcaatccattcagcaaaccccatgatcctagagcgacagctggtgcagcacatattgcagcataaagtttgccctttcctgcgtgctttttaaccatgttctccagaagtttgcagtctctaagattggaagaccctggcatacctccctaaaaaaaacacaacccaaatggatcaaaatgtcagatataagcaggggggataatagaccgaaccaattcttttttttctggacaagcttttggacccccttagacacgtgtagcgcaaaacagaactgcaggagttacaaatgagtagcatgactgacaataacatacatgtacatggtacaccaaaaagaaatattgaggaaaaggaatgcacattaatctgtttggccaaaattgctgggacaatcaagtttgagatggctggagcatgttttatcagtcagtgactcagggctacagatatgaatgctatcaagcacataaagcttcaataaaccaatattagtattgaattctgcttgctagcttcagcaaaccatacatgcctttaacattaggtatcattaaatcctaagtgttccatagctgagacctgagaatgcctcaccagctatgtcctttataaacatgatccattcacctcaacggcatccaccattaaaaaaactcagtcattaaattactgctcctgatgtttttagtattgatgatagcaggagacagcacatttacatttaacatgaagaagtacacttaagcaaagctaagaaacacggaaatttcttacctgcagcttctgagaagtggcatttaccctccccattcaggaaagcactaatagaattcaattgtcaatttgacatgctcagtgggttataaactatcatacttcctccgtttcacaatgtaagtcattctaacattttccatatccatattgatgttaatgaatctagataaatatatatgtctagattcattaacatcaatatgaatgtgggaaatgcgaatgacttaaattgtgaaacggagggagtacttattatcactcacatagtgccctcgtgaccttgtcttataaccaaatacgcaatactttgattgttttatcacaacatcaaaatactacaacagagcactagtttgctcgcatacaattcacaaacttgtgctcaggtcaggtataaatgatttcgaaggaaacgcaattaatttcacttggtcagcgttgtaagcgactcaaaaccacccattctcccccatccaatttgtgggttccccaaacacgaaacaaccatgtacagttaacacgggacgcgacgactgacgagccgtgcggcggggcgggcgggcaactccactcaccgggagcgagatgaggtcgaattcggcgtcggcgaggtcgtcgagcagcgcgtccgcggccagcttgacgccccaggctccgccgacctgcgcggagccggggtcgacggaggcgacggagacgtcggccccggcgcggcggagcacgtcgacggtgatgacggcctccatcggctccgtcccgctcgcgatcggcaccagcacctgcaccatcatcatcacagacaaacgcgcacacaccatccccccacctcaaccagtcagattctcaggggagggggaaccaaaaatccaaaaacacggctgcgagaggggggaacgcttgccttcttcgcgggcggcgacgccatggctgaggaggaggaggcgagcgcgcgggttagggtttggaggcggcggaggtgaggaggaggaggagagggaggtggggttttgagaggggagcagaagcggaggggaggaagaagagtggaggcagcgagtggccgcgtggccatttttctcggcgcttcggctacctcc
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CDS seq | atggccacgcggccactcgctgcctccactcttcttcctcccctccgcttctgctcccctctcaaaaccccacctccctctcctcctcctcctcacctccgccgcctccaaaccctaacccgcgcgctcgcctcctcctcctcagccatggcgtcgccgcccgcgaagaaggtgctggtgccgatcgcgagcgggacggagccgatggaggccgtcatcaccgtcgacgtgctccgccgcgccggggccgacgtctccgtcgcctccgtcgaccccggctccgcgcaggtcggcggagcctggggcgtcaagctggccgcggacgcgctgctcgacgacctcgccgacgccgaattcgacctcatctcgctcccgggaggtatgccagggtcttccaatcttagagactgcaaacttctggagaacatggttaaaaagcacgcaggaaagggcaaactttatgctgcaatatgtgctgcaccagctgtcgctctaggatcatggggtttgctgaatggattgaaggcaacttgttatccttcattcatggataaacttccttcagaggtcaatactgtagaatcgagggtgcagattgatgggaactgtgtgaccagtcgaggaccaggaacggccatggagtattctgttgttttggtcgaacaattatatggcaaagaaaaagctgatgaagttgctggtccaatggtcatgcggccccagcatggtgtggagttctcattgaaagagttgaattcaactagttggaatgttggtgaaacacctcagattcttgtaccaattgctaatgggacagaggagatggaagcaactatgataatcgacatcctcagaagggcgaaagcaaatgttgtcgttgcgtccttggaggaaactttggagattgttgcatccaggaaagtgaagatggttgctgatgttctgttggatgatgctcttaagcagcaatatgatctcattttgttaccaggtggtcttggtggtgcccaagcatatgcaaagtcagataaactgattggtctgatcaagaagcaagctgaggcaaacaagctatatggagctatatgtgcctcgccagcaatcgcccttgaaccacatggcctgctgaagggaaagaaggctacatcctttcctggtatgtggaacaagctctcggaccaaagcgaatgcaagaacagggttgtcgttgatggcaacctaatcaccagccaaggtccaggcacatccatggagttctctctcgccatcgtggagaagctgtttggtcgggagagggccgtcgagctcgccaaaaccatggtcttcatgtga
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Protein seq | MATRPLAASTLLPPLRFCSPLKTPPPSPPPPHLRRLQTLTRALASSSSAMASPPAKKVLVPIASGTEPMEAVITVDVLRRAGADVSVASVDPGSAQVGGAWGVKLAADALLDDLADAEFDLISLPGGMPGSSNLRDCKLLENMVKKHAGKGKLYAAICAAPAVALGSWGLLNGLKATCYPSFMDKLPSEVNTVESRVQIDGNCVTSRGPGTAMEYSVVLVEQLYGKEKADEVAGPMVMRPQHGVEFSLKELNSTSWNVGETPQILVPIANGTEEMEATMIIDILRRAKANVVVASLEETLEIVASRKVKMVADVLLDDALKQQYDLILLPGGLGGAQAYAKSDKLIGLIKKQAEANKLYGAICASPAIALEPHGLLKGKKATSFPGMWNKLSDQSECKNRVVVDGNLITSQGPGTSMEFSLAIVEKLFGRERAVELAKTMVFM |
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Function | Protein DJ-1 homolog B [UniProtKB/Swiss-Prot:Q9MAH3] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsARC_06g0018050 | OsARC_06g0018050.02 | Chr06 | 20671290 | 20675541 | - | NAM | ||
CDS seq | atggccacgcggccactcgctgcctccactcttcttcctcccctccgcttctgctcccctctcaaaaccccacctccctctcctcctcctcctcacctccgccgcctccaaaccctaacccgcgcgctcgcctcctcctcctcagccatggcgtcgccgcccgcgaagaaggtgctggtgccgatcgcgagcgggacggagccgatggaggccgtcatcaccgtcgacgtgctccgccgcgccggggccgacgtctccgtcgcctccgtcgaccccggctccgcgcaggtcggcggagcctggggcgtcaagctggccgcggacgcgctgctcgacgacctcgccgacgccgaattcgacctcatctcgctcccgggaggtatgccagggtcttccaatcttagagactgcaaacttctggagaacatggttaaaaagcacgcaggaaagggcaaactttatgctgcaatatgtgctgcaccagctgtcgctctaggatcatggggtttgctgaatggattgaaggcaacttgttatccttcattcatggataaacttccttcagaggtcaatactgtagaatcgagggtgcagattgatgggaactgtgtgaccagtcgaggaccaggaacggccatggagtattctgttgttttggtcgaacaattatatggcaaagaaaaagctgatgaagttgctggtccaatggtcatgcggccccagcatggtgtggagttctcattgaaagagttgaattcaactagttggaatgttggtgaaacacctcagattcttgtaccaattgctaatgggacagaggagatggaagcaactatgataatcgacatcctcagaagggcgaaagcaaatgttgtcgttgcgtccttggaggaaactttggagattgttgcatccaggaaagtgaagatggttgctgatgttctgttggatgatgctcttaagcagcaatatgatctcattttgttaccagtaagtttagtgaatcaatgggtatttcaattttga
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Protein seq | MATRPLAASTLLPPLRFCSPLKTPPPSPPPPHLRRLQTLTRALASSSSAMASPPAKKVLVPIASGTEPMEAVITVDVLRRAGADVSVASVDPGSAQVGGAWGVKLAADALLDDLADAEFDLISLPGGMPGSSNLRDCKLLENMVKKHAGKGKLYAAICAAPAVALGSWGLLNGLKATCYPSFMDKLPSEVNTVESRVQIDGNCVTSRGPGTAMEYSVVLVEQLYGKEKADEVAGPMVMRPQHGVEFSLKELNSTSWNVGETPQILVPIANGTEEMEATMIIDILRRAKANVVVASLEETLEIVASRKVKMVADVLLDDALKQQYDLILLPVSLVNQWVFQF
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsARC_06g0018050 | OsARC_06g0018050.01 | Chr06 | 20670423 | 20675541 | - | NAM | ||
CDS seq | atggccacgcggccactcgctgcctccactcttcttcctcccctccgcttctgctcccctctcaaaaccccacctccctctcctcctcctcctcacctccgccgcctccaaaccctaacccgcgcgctcgcctcctcctcctcagccatggcgtcgccgcccgcgaagaaggtgctggtgccgatcgcgagcgggacggagccgatggaggccgtcatcaccgtcgacgtgctccgccgcgccggggccgacgtctccgtcgcctccgtcgaccccggctccgcgcaggtcggcggagcctggggcgtcaagctggccgcggacgcgctgctcgacgacctcgccgacgccgaattcgacctcatctcgctcccgggaggtatgccagggtcttccaatcttagagactgcaaacttctggagaacatggttaaaaagcacgcaggaaagggcaaactttatgctgcaatatgtgctgcaccagctgtcgctctaggatcatggggtttgctgaatggattgaaggcaacttgttatccttcattcatggataaacttccttcagaggtcaatactgtagaatcgagggtgcagattgatgggaactgtgtgaccagtcgaggaccaggaacggccatggagtattctgttgttttggtcgaacaattatatggcaaagaaaaagctgatgaagttgctggtccaatggtcatgcggccccagcatggtgtggagttctcattgaaagagttgaattcaactagttggaatgttggtgaaacacctcagattcttgtaccaattgctaatgggacagaggagatggaagcaactatgataatcgacatcctcagaagggcgaaagcaaatgttgtcgttgcgtccttggaggaaactttggagattgttgcatccaggaaagtgaagatggttgctgatgttctgttggatgatgctcttaagcagcaatatgatctcattttgttaccaggtggtcttggtggtgcccaagcatatgcaaagtcagataaactgattggtctgatcaagaagcaagctgaggcaaacaagctatatggagctatatgtgcctcgccagcaatcgcccttgaaccacatggcctgctgaagggaaagaaggctacatcctttcctggtatgtggaacaagctctcggaccaaagcgaatgcaagaacagggttgtcgttgatggcaacctaatcaccagccaaggtccaggcacatccatggagttctctctcgccatcgtggagaagctgtttggtcgggagagggccgtcgagctcgccaaaaccatggtcttcatgtga
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Protein seq | MATRPLAASTLLPPLRFCSPLKTPPPSPPPPHLRRLQTLTRALASSSSAMASPPAKKVLVPIASGTEPMEAVITVDVLRRAGADVSVASVDPGSAQVGGAWGVKLAADALLDDLADAEFDLISLPGGMPGSSNLRDCKLLENMVKKHAGKGKLYAAICAAPAVALGSWGLLNGLKATCYPSFMDKLPSEVNTVESRVQIDGNCVTSRGPGTAMEYSVVLVEQLYGKEKADEVAGPMVMRPQHGVEFSLKELNSTSWNVGETPQILVPIANGTEEMEATMIIDILRRAKANVVVASLEETLEIVASRKVKMVADVLLDDALKQQYDLILLPGGLGGAQAYAKSDKLIGLIKKQAEANKLYGAICASPAIALEPHGLLKGKKATSFPGMWNKLSDQSECKNRVVVDGNLITSQGPGTSMEFSLAIVEKLFGRERAVELAKTMVFM
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.727849 | 0.538800 | None |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0531200 | RBH | 8.464483 | 10.378757 | 12.946736 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g34040 | RBH | 5.627286 | 6.187871 | 2.697401 |
Nipponbare | IRGSP 1.0 | RAP-db | Os06g0531200 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0018270 | RBH | 2.477942 | 16.574116 | 11.868711 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0018100 | RBH | 1.036214 | 2.145528 | 7.294876 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0018200 | RBH | 6.777719 | 11.820007 | 13.930946 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0018440 | RBH | 12.739939 | 23.300108 | 29.444052 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0311300 | RBH | 15.2355805 | 16.066424 | 102.22612 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0017920 | RBH | 0.846071 | 1.458341 | 2.983696 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0287000 | RBH | 9.016726 | 10.100016 | 13.287418 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0018320 | RBH | 1.021860 | 0.306647 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0018300 | RBH | 1.567257 | 24.383780 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0017940 | RBH | 12.960965 | 24.048981 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0018660 | RBH | 2.714297 | 1.322910 | 2.630188 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0018100 | RBH | 1.395012 | 6.465042 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G018030 | RBH | 1.192357 | 7.638249 | 5.125859 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0018180 | RBH | 4.581137 | 20.058540 | 14.539177 |