Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_04g0028050 | OGI:04094670 | 9/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr04:31131885-31135724 | ||||||||
| Gene Symbol | SDRLK-53 | ||||||||||
| DNA seq | ctaccgtccttctaataccgtgaggctcatgttattattagagctgctggtatttcctcctgattgtttggctccagaggccctatgtgcaaaatacacaggttgtattggagctggaagcgctgcagcttcattctctaacatgaaaacaacagaagacatgggtggcctattatttggattatcttgcacgcacaacagccctatgtggatacatagtaaaacttccatttttgagcaactctcagcaatggatgaatccaccaaatccatggccttgtcatccttccataagctccatgcctaaacagtgaaatagatcagtccatataaaagcggtatagttattttgaatttttatggacatagagcattccatggtacttacataagctaataggttgggaaagtccatcagccgaggtaagctaatcttcagaccacttacaatctccaagagtataacaccatagttatatgtgtcggacttgactgaaaaggcgccatccattgcatattcaggagacatgtaaccactgcttaacagttttagtaataagtaacaaaggatttttcaggaaatcaatgtaatagtaaaaaacaaattcctggatcactcactatgttccaacaactcggttagtattggcttcttgctggttgccaccgaagattcttgccataccaaaatcagatatcttagggctcatatccacatccaacaagatgttgcttgatttgagatctctatgaattattgtcaaccttgagtcttggtggagataaagaagtcctctagctactcctttgattatcttaaaccttgttggctaatcaagagcatacttacttgcaggatctatcaagaatggtatacaatgttcttatagtaaggataattttatcatctttgagaaagtactggtaagtatcacattgtttattgtaaattttggtaccttcagatactaaatatctcaaggtaccaaaaattttagtgtaaaatttaggtatcttgagatactttttcaagaacaataaaatttctctatcaggaagcatggagtgaagtttattggatcgcatggtatgtttttgaacagtaccgaaaatgaaagcttccaagcttttgtttggcaagtattcataaattagcagcttctcatctccatgtatgcaacagccaagaagtttaacgaggttcctgtgctgcaatttggcaattagaacaacttcatttctgaactcttctactccttgtccagaacccttgctaagccttttaattgccacttctttgttatcacccagcatgccctacacaatttaatcaattaatttttttattaagaaagttcatctcgagatgcactttttaccgcaatataagggacgtggtttcgaccccaaggttccttattcaattcttaacacgctcacatattcttcttaattatttaacaccatgtttcttgtcggttctcccttttttaaaaataaagttcatcatccataattgggattttcatatggtatcactgttttcacttttaagtagtaaactactccctccgtcctatggtataagggattttgggtagatgtgacacccaaaatctcttatatttttggacagagggagtactaattgtggcacttcttcttctgtaatactcctaaaaaatatgctctaaaattgaagaatattgtgcgatagttttgtcctactgtagttttcaatacagtttttgtgggctaccttataaacctttccgaagccaccttgtccgagcatgttgtcgtcagaaaaattatttgttgcagcagcaatgtctccaaaactgacaaacgggagttctaaattttcatcaccaagttcatttaatgcactcaagtatcctagcatccttttctggacaaccttattctgacgtttgcctgacaggaatatcaatatcgtgtattttaatattaatagtagtattattcttaattagataagctgtgagaactgagaagtgaggtggctcggtatctacctctgcacttgcgtaaccacacaaggaacatgctcatcagcagaagcaaacatgctgctgtaactgggagcagaacttttatcacagtcctcttcttattgttaactgcgaaaagaaatatttcaccaaaataattagtacttcctccacgctaaaatatagtaacgtagtactcaatcagacatcacaaatattatagactctaatcgagtactaggcgatgtttaaccgagtactaggatattttacagcgaaggaaatatatatgtaattaaccattgccaaacacattgagcaattctacggtccttaagaaggtatcatgaggtatcaaaaatttagtgtaaaatttggtaccttatagtacctagttaccaaaaggtaccaaatttacaatagaaaaagtggtaccttatggtacctcctcaagaacacattagctcgaacacattagtttcagtgttgtacctagttcaggctttgccagcctcaaatagagatcctgccctttgtcgacataccgaacgtcaatgacgtcacccgtccacatcacgcatccgctgccgccgccggcgcctcggatgtccgcggcggcgtaggcgacgcaggaacagttggcgaagcacctcgccctgcactcgtcaagcgtggcgcccgtgtccaccgtggcgttgtccgtgtcggggagcttcacgccgcgcaccggcacgaacccgtccgtggtgctcccgttgccgcactccagcggcgcgttcctccggcaaccaccggaggtctccctcatggaccactgggaggggaacatcgggctgaaccccgccatgcagctgcagaagagcgtcgacgcggtgttcacgttgcacagcccgaacgcgccgcacttggcgtagtcgtcgcacacgtcgcgcggcgcctgcgcgaacgtgttccaccccttgctgctgggatcccacacgaggcgctggatcacgccggcctcactcagcacgaggcgggagaagggggccgcggcggtggcggcggtgaagacgtaggcgatctcgtcgggcttgaccaccacctggttcgcgaacatggacgagtacgatgccatctccgggacaccgctgaaccacagcccgttccatggccccgtgcggtacttcttgccggcgccgcaccacgagacgcagtccgctagccctctcgtgtccatcacgcggcggcagccccccgtcgccgggtcgtcgggcgcgcgccacgacgtgagggaccactcggcgccggtccgtgggttcctgccgagcctcatgccggcgatcagggtgttcgacgggtggtcgaacgactgccacagcacgtcgccgctgccctggtcgcgcacgacgaggttcccagactcgagcagctgcaccgccaccgatggagacgagccagtcgtgttcgacgaccaggcggcctggccggcggcgccgtcgagcaggacgagcccgcccgtgccatcgatagccactacgccggcggtgtcgttcagtgggctgtcgcggttggccacccagacggcgtccgccgactcggagaaccatatcgcgaggtatctcctgcttggcaagccgggtgagaagaaccccagagtgaaggagccattggctgacacgagcgtgtcgccgtcagtgaggttgcggccattgctgagcgtgtccgatgcaacgccggcggcacggtattggaaacaaaggagcacggagaagaagatgacgggacggtagaaaatgttggtggttgctgcttccataactgttgattctttttttccttgcat
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| CDS seq | atgcaaggaaaaaaagaatcaacagttatggaagcagcaaccaccaacattttctaccgtcccgtcatcttcttctccgtgctcctttgtttccaataccgtgccgccggcgttgcatcggacacgctcagcaatggccgcaacctcactgacggcgacacgctcgtgtcagccaatggctccttcactctggggttcttctcacccggcttgccaagcaggagatacctcgcgatatggttctccgagtcggcggacgccgtctgggtggccaaccgcgacagcccactgaacgacaccgccggcgtagtggctatcgatggcacgggcgggctcgtcctgctcgacggcgccgccggccaggccgcctggtcgtcgaacacgactggctcgtctccatcggtggcggtgcagctgctcgagtctgggaacctcgtcgtgcgcgaccagggcagcggcgacgtgctgtggcagtcgttcgaccacccgtcgaacaccctgatcgccggcatgaggctcggcaggaacccacggaccggcgccgagtggtccctcacgtcgtggcgcgcgcccgacgacccggcgacggggggctgccgccgcgtgatggacacgagagggctagcggactgcgtctcgtggtgcggcgccggcaagaagtaccgcacggggccatggaacgggctgtggttcagcggtgtcccggagatggcatcgtactcgtccatgttcgcgaaccaggtggtggtcaagcccgacgagatcgcctacgtcttcaccgccgccaccgccgcggcccccttctcccgcctcgtgctgagtgaggccggcgtgatccagcgcctcgtgtgggatcccagcagcaaggggtggaacacgttcgcgcaggcgccgcgcgacgtgtgcgacgactacgccaagtgcggcgcgttcgggctgtgcaacgtgaacaccgcgtcgacgctcttctgcagctgcatggcggggttcagcccgatgttcccctcccagtggtccatgagggagacctccggtggttgccggaggaacgcgccgctggagtgcggcaacgggagcaccacggacgggttcgtgccggtgcgcggcgtgaagctccccgacacggacaacgccacggtggacacgggcgccacgcttgacgagtgcagggcgaggtgcttcgccaactgttcctgcgtcgcctacgccgccgcggacatccgaggcgccggcggcggcagcggatgcgtgatgtggacgggtgacgtcattgacgttcgttttggagacattgctgctgcaacaaataatttttctgacgacaacatgctcggacaaggtggcttcggaaagggcatgctgggtgataacaaagaagtggcaattaaaaggcttagcaagggttctggacaaggagtagaagagttcagaaatgaagttgttctaattgccaaattgcagcacaggaacctcgttaaacttcttggctgttgcatacatggagatgagaagctgctaatttatgaatacttgccaaacaaaagcttggaagctttcattttcgtcaagtccgacacatataactatggtgttatactcttggagattgtaagtggtctgaagattagcttacctcggctgatggactttcccaacctattagcttatgcatggagcttatggaaggatgacaaggccatggatttggtggattcatccattgctgagagttgctcaaaaatggaagttttactatgtatccacatagggctgttgtgcgtgcaagataatccaaataataggccacccatgtcttctgttgttttcatgttagagaatgaagctgcagcgcttccagctccaatacaacctgtgtattttgcacatagggcctctggagccaaacaatcaggaggaaataccagcagctctaataataacatgagcctcacggtattagaaggacggtag
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| Protein seq | MQGKKESTVMEAATTNIFYRPVIFFSVLLCFQYRAAGVASDTLSNGRNLTDGDTLVSANGSFTLGFFSPGLPSRRYLAIWFSESADAVWVANRDSPLNDTAGVVAIDGTGGLVLLDGAAGQAAWSSNTTGSSPSVAVQLLESGNLVVRDQGSGDVLWQSFDHPSNTLIAGMRLGRNPRTGAEWSLTSWRAPDDPATGGCRRVMDTRGLADCVSWCGAGKKYRTGPWNGLWFSGVPEMASYSSMFANQVVVKPDEIAYVFTAATAAAPFSRLVLSEAGVIQRLVWDPSSKGWNTFAQAPRDVCDDYAKCGAFGLCNVNTASTLFCSCMAGFSPMFPSQWSMRETSGGCRRNAPLECGNGSTTDGFVPVRGVKLPDTDNATVDTGATLDECRARCFANCSCVAYAAADIRGAGGGSGCVMWTGDVIDVRFGDIAAATNNFSDDNMLGQGGFGKGMLGDNKEVAIKRLSKGSGQGVEEFRNEVVLIAKLQHRNLVKLLGCCIHGDEKLLIYEYLPNKSLEAFIFVKSDTYNYGVILLEIVSGLKISLPRLMDFPNLLAYAWSLWKDDKAMDLVDSSIAESCSKMEVLLCIHIGLLCVQDNPNNRPPMSSVVFMLENEAAALPAPIQPVYFAHRASGAKQSGGNTSSSNNNMSLTVLEGR |
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| Function | G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [UniProtKB/Swiss-Prot:O81832] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_04g0028050 | OsARC_04g0028050.01 | Chr04 | 31131885 | 31135724 | - | NAM | ||
| CDS seq | atgcaaggaaaaaaagaatcaacagttatggaagcagcaaccaccaacattttctaccgtcccgtcatcttcttctccgtgctcctttgtttccaataccgtgccgccggcgttgcatcggacacgctcagcaatggccgcaacctcactgacggcgacacgctcgtgtcagccaatggctccttcactctggggttcttctcacccggcttgccaagcaggagatacctcgcgatatggttctccgagtcggcggacgccgtctgggtggccaaccgcgacagcccactgaacgacaccgccggcgtagtggctatcgatggcacgggcgggctcgtcctgctcgacggcgccgccggccaggccgcctggtcgtcgaacacgactggctcgtctccatcggtggcggtgcagctgctcgagtctgggaacctcgtcgtgcgcgaccagggcagcggcgacgtgctgtggcagtcgttcgaccacccgtcgaacaccctgatcgccggcatgaggctcggcaggaacccacggaccggcgccgagtggtccctcacgtcgtggcgcgcgcccgacgacccggcgacggggggctgccgccgcgtgatggacacgagagggctagcggactgcgtctcgtggtgcggcgccggcaagaagtaccgcacggggccatggaacgggctgtggttcagcggtgtcccggagatggcatcgtactcgtccatgttcgcgaaccaggtggtggtcaagcccgacgagatcgcctacgtcttcaccgccgccaccgccgcggcccccttctcccgcctcgtgctgagtgaggccggcgtgatccagcgcctcgtgtgggatcccagcagcaaggggtggaacacgttcgcgcaggcgccgcgcgacgtgtgcgacgactacgccaagtgcggcgcgttcgggctgtgcaacgtgaacaccgcgtcgacgctcttctgcagctgcatggcggggttcagcccgatgttcccctcccagtggtccatgagggagacctccggtggttgccggaggaacgcgccgctggagtgcggcaacgggagcaccacggacgggttcgtgccggtgcgcggcgtgaagctccccgacacggacaacgccacggtggacacgggcgccacgcttgacgagtgcagggcgaggtgcttcgccaactgttcctgcgtcgcctacgccgccgcggacatccgaggcgccggcggcggcagcggatgcgtgatgtggacgggtgacgtcattgacgttcgttttggagacattgctgctgcaacaaataatttttctgacgacaacatgctcggacaaggtggcttcggaaagggcatgctgggtgataacaaagaagtggcaattaaaaggcttagcaagggttctggacaaggagtagaagagttcagaaatgaagttgttctaattgccaaattgcagcacaggaacctcgttaaacttcttggctgttgcatacatggagatgagaagctgctaatttatgaatacttgccaaacaaaagcttggaagctttcattttcgtcaagtccgacacatataactatggtgttatactcttggagattgtaagtggtctgaagattagcttacctcggctgatggactttcccaacctattagcttatgcatggagcttatggaaggatgacaaggccatggatttggtggattcatccattgctgagagttgctcaaaaatggaagttttactatgtatccacatagggctgttgtgcgtgcaagataatccaaataataggccacccatgtcttctgttgttttcatgttagagaatgaagctgcagcgcttccagctccaatacaacctgtgtattttgcacatagggcctctggagccaaacaatcaggaggaaataccagcagctctaataataacatgagcctcacggtattagaaggacggtag
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| Protein seq | MQGKKESTVMEAATTNIFYRPVIFFSVLLCFQYRAAGVASDTLSNGRNLTDGDTLVSANGSFTLGFFSPGLPSRRYLAIWFSESADAVWVANRDSPLNDTAGVVAIDGTGGLVLLDGAAGQAAWSSNTTGSSPSVAVQLLESGNLVVRDQGSGDVLWQSFDHPSNTLIAGMRLGRNPRTGAEWSLTSWRAPDDPATGGCRRVMDTRGLADCVSWCGAGKKYRTGPWNGLWFSGVPEMASYSSMFANQVVVKPDEIAYVFTAATAAAPFSRLVLSEAGVIQRLVWDPSSKGWNTFAQAPRDVCDDYAKCGAFGLCNVNTASTLFCSCMAGFSPMFPSQWSMRETSGGCRRNAPLECGNGSTTDGFVPVRGVKLPDTDNATVDTGATLDECRARCFANCSCVAYAAADIRGAGGGSGCVMWTGDVIDVRFGDIAAATNNFSDDNMLGQGGFGKGMLGDNKEVAIKRLSKGSGQGVEEFRNEVVLIAKLQHRNLVKLLGCCIHGDEKLLIYEYLPNKSLEAFIFVKSDTYNYGVILLEIVSGLKISLPRLMDFPNLLAYAWSLWKDDKAMDLVDSSIAESCSKMEVLLCIHIGLLCVQDNPNNRPPMSSVVFMLENEAAALPAPIQPVYFAHRASGAKQSGGNTSSSNNNMSLTVLEGR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0633200 | RBH | 0.000000 | 0.409613 | 0.900444 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g54070 | RBH | 0.000000 | 0.252850 | 0.212736 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0633200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0027850 | RBH | 0.131562 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0028620 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0028290 | SBH | 0.0 | 0.237076 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0028030 | SBH | 0.031282 | 0.013722 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0028350 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0507200 | RBH | 1.9603475 | 2.1253495 | 2.8731885 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0026980 | SBH | 0.129210 | 0.011754 | 0.285752 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0511700 | SBH | 0.7956625 | 2.3567395 | 2.66594 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0027410 | SBH | 0.0 | 0.037525 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0027240 | SBH | 0.052717 | 1.409014 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0027300 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0027900 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0027880 | SBH | 0.0 | 0.604004 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G027250 | RBH | 0.144768 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0027200 | SBH | 0.0 | 0.0 | 0.0 |
