Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsARC_04g0014520 OGI:04067250 | 15/16 ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) Chr04:20653839-20658965
Gene Symbol PTR
DNA seq

CGTCTCCAAGGCAAAGCATAATGTATTTCCTATTCCTTATCAAAGTAGAGCCTTATAATTTCAACCTAGCATTACTCATTTTCTTCATTTCTTGCCACTATTCCTCGTGCATGTATACATACATACATACATACATACATACATACATACATACATACATTACAGCTATACGCATATACAGTTTTCAGTCGCATAGAATTATAATTCTATGTTTTTTTTTCTTCAGATGATCTCCTTGCCGTTGCCGTCGCCTTCGGCGGCGACCTGAGCGGAGGCGGAGGCGTCGCAGCCGTCGTCGGCGCCGCCGGAGTTGTACCACCTCGCGCAGAGCAGGTAGCAGAAGAAGTTGATCACGCTGAGCACGGCGAGCATCCAGTAGAAGAGGTCCAGCCTGTCCTTGTCCAGGTCGTTGTCGCCGAGCCACCCGCCATGGCCGCCGCCGCCGCGGCTCGCCGTGACACGGTTCACGAGCGACACGAGCACCGAGCTGAGGTAGAAGCCGAAGGCGTAGGAGCAGTAGGTGAGCGCCGTGAGGAAGGACTGCATGCCGGCGCCGCGCGCCTGCTTGTAGAAGAACTCGATGAGCCCCACGGCGGTGAACATCTCCGACACGCCGAACACGAGGAACTGCGGCACGATCCACAGCACGGACATCGCCCGCGGCGGCGCGCCGCCGGCGGACAGGGACAGGTCGCGGCGCCTGTGCTCGACGGTGGCGGCGGCGACCATGGAGAGCGGCACGGTGCAGAGGCCCACGCCGATCCGCTGGAGCGGGGTGATCCCGGACCGCGCCCCTGTGGCGCGCCTCATGAGCGGGACGAGGAGGAGCTCGTACGCCGGGACGAGCGCCAGCAGCATGGCGTAGGGGATGGCCTGCAGCGACGCCGGCGGGATGCGGAACGAGGAGCCGGCGCCGCCGAGCGCGGTGTCCATGGCGCTCCCCTGCTGCACCGAGAACGTCTGCAGCTGCGCCAGCACGGTGTTGAAGACGATGGTGCACGCGAAGATGGGCGCCACGGCGAGGAGCGTCTTGGCCTGCCGCACCTCGGCCGCCGTGCACAGCCGCCACGGGCTCTCCGGCTTCGTGTTCGGCCCCTGCTCCGCCGCCCTGATGCACGCCTTGTCCAAGAACCTGCACACGTTTCCGTCACGGATCAGTCACACGCAGACGCAGCAACGTGCATGGCGCGCGGCACCGCCGCCGCCGGCGCCGGCTGCTGGGACGAGGAGCTCACCTGAACTTGCTGGCGTGGCGGAAGCTGCCGCCGGCGAGGTGCGCCGGCTCGCAAACGCCGGCATTGACGGGATCGGAGGAGCTGGAAGGGCAGATTTGCTTCCTCTTGGTGTAGGCGGCAACAAACACCTACAGGAACAGTATCAGTATTGTCAGGGTTGAAGGTAAACTAACCTGCAAGATTTTTTTTAAAAAAAATTAAAAATTATATCGAAATGAGAAGATTTTTGAAGATAAAAGCTCTTCAAGAATAAACCATTTTGCAAAAAAAAATCATGGTACTGTTATAATATTTTTGTTTAAAAAATATGGTGTTAATTTGACATGAACAGCAAACACATGATACTGTTCTTACTTGCATAAAGAAAGCTTGTCATATTGAACCCATGCTAAAATAAAGCAACTGCATATATTGATGATTGATCATGTGACAGTTTAAATAATAGGCAGACAGTTCTGTCATCATCGCTAAGGATCAAAAACCATCGCTGCACTGAACTGACAGGCTAACAGTACTTAATTAATCATAAGAACATTTTAAACAGCCTCTCAGACAAAACCTAGCAGATGGCACATCGGTTCATAGTATCTTACTAGATCTGATCGACAAAGCAGATGCAAAAACTATTTTGGCCCATGATCTGGTTTCGAACCACTGAACTGTAGAATATGACAAAACTGACGACCATGATGCATGGCCATGGAGAGCCACTCTGACTCTGAAGAACTCTGAATGGTGACAAAAGGACATCTACCTACTAATTCGAGCTATATCTTATCTAATCACACGGTTGCGACTATAATATAATGCGTGATCATATCAATGATCATGACAGAAAGTTTCATGCAAATGACAAACTGCAGTTTCTTGGAACTCCCACTAACCACTGCCCTTGTTTAACATAATTTGGCGATGGGCACGCCACTAACACAACAGTCCATGCTCTGTCAGTTTTTAGAATGCAGCGAGATTGTACGGTTGCAGGTAAACCACCTCGCCTATAGCTATTTAACTTAATCATGTTGCTAAGATAATTGGACAACCATGTCTGAAAACATTTGGCTCCTGTGGGCTAGTGAGGCAGTGAGCAACCTAGTTCAGTAGCTGACAATCTGACAAGAATCTTATCAACTGTTCGACCTTAAAAATCAACTTGGTAACGAATATGCAGTTTTTTTTAATGCAAATACATATCTCGGCTGTAACAAAATTCAAACGAGAGCATCTTGATCTTTTCGGTTATTCGGTTATTTTACGGTTTCAGAATGGTATCATCCTATCATTACTTTTTCTTTTAAAGATGACGGAAGAATATTGCAGCCGGCCTCTGCATCATCATTAGATGCTCACAGTCAACGAGATTATGTAAATATAAATATATTAGTACTATGTTTTTTTCAAACACTTCAAACTGAAACTAAAGCCATATTAATCTTTTAGCTCATTGTTGTTTCAAATTAAGGTTTCAGAATTAATGGTATTATAAAAGTGTGTTAATTACTTATTTTCCTACCCTTGCAATGGGCGTGAAGATGCTGCCCTGAGGAGGCTTGTTCCGGTAGAAGGCGGCGCCGGAGACGAGGCTGACGAGCCCGGCCGCCATGGCGGCGGCGGAGATGCCGAACCCGACGTCCATCCCGGAGTGCGTCTGCACCCAGACCAGCGCCGTCAGCGCGACGAGCTCGCCGGCGCAGAAGCTGAAGTAGGCCGAATTGAAGTAGGTCGAGAGCCTCTTGGCATTGTCCGCCGCGGCGGCGCCGCCGCCGCCGGCCGCGGCCGCGAACTGGTCGGCGCCGTGCGCGATCATGTTGGGCTTGAGGCAGCCGCTGCCGAGCGCCACGAGGTAGAGCGCGGCGAAGAAGATGCTCGCCTTGATGCCCCTTGCCTGCTCGCAGCCGCCGTCCGTGGCCGCCATGTTGCACGGCGGCGGCTTCAGCTGCGGCAGGTGAGCTTGCACCGACAGAAGTATGAAACCCTGCATATACCCCAAAAAAACAGAGTAGTTTTTTAAAAAATCATTCGCAAATAGTGGCGGATCTAGAAAATCGATTTGTTGGTGTCATAACATGTCTATCGGTATCATAGTATACTAATTATGTTTAGATCATAGTGTTATAATATATGGATAAGCAGTTTTGCTATAGTTTTTGTGTAAAGTCGTCGGTGTCGCTTGACACCAGCCCTAGTTCTGTAGATCTCACAAAGTTGTTGTTAACTCTGAACCTGCAATCAAATATGTGCATTTGTTTCCTCCTCATTTGTGAAGGAAATATGATTCAAATGCTATTAGGATTCTTGAAGATAAACCATGATATATGGTCAGAAAATACTACTATTTTTAGGTGAATTACACAAGTTGTAGGAACACTACAAAAAGTGGCTAATGTGTCCAGTACTTAGTACAGGTAGTACAGCTCTGTCTGGGCCAGTTGTTTTCCCTGTAGCAAATGTGATGCTCGTCCTGCAGCTCTATCAGTTTGCTTTACGTTAAAAGAGATAAGAAAGAGCAATTTGCTCTGCGAATTGCGAGCCGCGTGTACCGTAGCAGCCGTGTCATCGTTGAATTCAACCTGGTCCCGAAAACATTTAAGCAATCGGGAACAAAATCCCTGGTCCATGCATGGTGATTGGCACCTTTTTTTTTCAGGCCCATCCATCCATGTTCATCGCCTCTCTCTCTCTCTCTTTACGTGAAAACAACGGTCAACAACAACAAAAAAAAGTAACTGTGCATTCCATAATTCCATTTCCTTTCTCGGTGCAGCACGCACAAAACCATCATCGATCAATGTCTCATGTTTAAACAGATTGTCCGTCTTTTCTTATCAGCTTAAATTATTTAAAAAAAATTCTAAGGACAAACAGTTTGATTGCATGCATGAGATCCTCAACCCTCTCAGCTCCAGAACAGAACACGATCGAATTATCCGTCTTTCCTCGTCAGCTAAAAACATTTTTTTTCTTCTAACAACGGATTGTTTGGTTGCATGTACGAGACTCAATATATAGAGTTAGTTTGTAGCGGTAGCTTCTCGCATAATCATAAACTCTACCAAACAGTCTAGCTTTTTGTTTAAATTTTGAGAAACTGTAGTTATAGAATCTAAGAAATGAACTGAATACATTGGGAAGGATTGAGGAGGTGAATGGGTGTATGTATGTATGTACCGAGAGCTCGACGAAGCCGAAGATGAGCATGGTCCAGAAGCAGCCGAGGTAGGAGTCGGAGAGGAATCCGCCGAGGAGGGAGAGTAGGAAGATGGTGCCGACGAAGTTGGTCACCACGTTGGCCGCCTGCGACAGCGGGAAGTGCATCTCCCCGAACACGTACGTTATCAGGTTGTTCCCCACCGCCGCGATCGCCATGATCTCGAACGCCTGGATCCCTGCGTGCAGCACACATTCGCCGAATCAAACCCCACATCATCCATTGTCCACCACGCACTGGCCATGATCAACCAATATTGGTCCCTAGCTCAACTGCTCAAGCACAGGAGCACTCACCTAGCACGAAGACGGCGGCGCGCATGCCGCCGTGGCGGCGCGGCTCGCACGGCCGGCCGCGCCAGTCGACGGCGGCATCCGGCGGCGGCGACGACGACGCGCAGCTCTCCACATCCATTGCCGCGAACGCGCACAAGAATTGCACGTCAATAGCTCTCTAAGCCTCTCTACCTCTGTCTCTCTGCTTTCTTGTTGCTGTCTGTCTAGCTTAGGTGTGGTATATGGCAAGTTGCGACCTGTGAGCTGGAGGCTTTATTTATAGGCTGCTGCTGATGCTGAATCCGATCGTGATTATCCCAGCAATTAATTAAGCCCCTTTAATTAATTCTGCTACATGATGAGCAGCAGCAGCAGCACAGATCGCTTCTGCTCTTGTGAATGAACTGCC

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CDS seq

ATGGATGTGGAGAGCTGCGCGTCGTCGTCGCCGCCGCCGGATGCCGCCGTCGACTGGCGCGGCCGGCCGTGCGAGCCGCGCCGCCACGGCGGCATGCGCGCCGCCGTCTTCGTGCTAGGGATCCAGGCGTTCGAGATCATGGCGATCGCGGCGGTGGGGAACAACCTGATAACGTACGTGTTCGGGGAGATGCACTTCCCGCTGTCGCAGGCGGCCAACGTGCTGAAGCCGCCGCCGTGCAACATGGCGGCCACGGACGGCGGCTGCGAGCAGGCAAGGGGCATCAAGGCGAGCATCTTCTTCGCCGCGCTCTACCTCGTGGCGCTCGGCAGCGGCTGCCTCAAGCCCAACATGATCGCGCACGGCGCCGACCAGTTCGCGGCCGCGGCCGGCGGCGGCGGCGCCGCCGCGGCGGACAATGCCAAGAGGCTCTCGACCTACTTCAATTCGGCCTACTTCAGCTTCTGCGCCGGCGAGCTCGTCGCGCTGACGGCGCTGGTCTGGGTGCAGACGCACTCCGGGATGGACGTCGGGTTCGGCATCTCCGCCGCCGCCATGGCGGCCGGGCTCGTCAGCCTCGTCTCCGGCGCCGCCTTCTACCGGAACAAGCCTCCTCAGGGCAGCATCTTCACGCCCATTGCAAGGGTGTTTGTTGCCGCCTACACCAAGAGGAAGCAAATCTGCCCTTCCAGCTCCTCCGATCCCGTCAATGCCGGCGTTTGCGAGCCGGCGCACCTCGCCGGCGGCAGCTTCCGCCACGCCAGCAAGTTCAGGTTCTTGGACAAGGCGTGCATCAGGGCGGCGGAGCAGGGGCCGAACACGAAGCCGGAGAGCCCGTGGCGGCTGTGCACGGCGGCCGAGGTGCGGCAGGCCAAGACGCTCCTCGCCGTGGCGCCCATCTTCGCGTGCACCATCGTCTTCAACACCGTGCTGGCGCAGCTGCAGACGTTCTCGGTGCAGCAGGGGAGCGCCATGGACACCGCGCTCGGCGGCGCCGGCTCCTCGTTCCGCATCCCGCCGGCGTCGCTGCAGGCCATCCCCTACGCCATGCTGCTGGCGCTCGTCCCGGCGTACGAGCTCCTCCTCGTCCCGCTCATGAGGCGCGCCACAGGGGCGCGGTCCGGGATCACCCCGCTCCAGCGGATCGGCGTGGGCCTCTGCACCGTGCCGCTCTCCATGGTCGCCGCCGCCACCGTCGAGCACAGGCGCCGCGACCTGTCCCTGTCCGCCGGCGGCGCGCCGCCGCGGGCGATGTCCGTGCTGTGGATCGTGCCGCAGTTCCTCGTGTTCGGCGTGTCGGAGATGTTCACCGCCGTGGGGCTCATCGAGTTCTTCTACAAGCAGGCGCGCGGCGCCGGCATGCAGTCCTTCCTCACGGCGCTCACCTACTGCTCCTACGCCTTCGGCTTCTACCTCAGCTCGGTGCTCGTGTCGCTCGTGAACCGTGTCACGGCGAGCCGCGGCGGCGGCGGCCATGGCGGGTGGCTCGGCGACAACGACCTGGACAAGGACAGGCTGGACCTCTTCTACTGGATGCTCGCCGTGCTCAGCGTGATCAACTTCTTCTGCTACCTGCTCTGCGCGAGGTGGTACAACTCCGGCGGCGCCGACGACGGCTGCGACGCCTCCGCCTCCGCTCAGGTCGCCGCCGAAGGCGACGGCAACGGCAAGGAGATCATCTGA

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Protein seq

MDVESCASSSPPPDAAVDWRGRPCEPRRHGGMRAAVFVLGIQAFEIMAIAAVGNNLITYVFGEMHFPLSQAANVLKPPPCNMAATDGGCEQARGIKASIFFAALYLVALGSGCLKPNMIAHGADQFAAAAGGGGAAAADNAKRLSTYFNSAYFSFCAGELVALTALVWVQTHSGMDVGFGISAAAMAAGLVSLVSGAAFYRNKPPQGSIFTPIARVFVAAYTKRKQICPSSSSDPVNAGVCEPAHLAGGSFRHASKFRFLDKACIRAAEQGPNTKPESPWRLCTAAEVRQAKTLLAVAPIFACTIVFNTVLAQLQTFSVQQGSAMDTALGGAGSSFRIPPASLQAIPYAMLLALVPAYELLLVPLMRRATGARSGITPLQRIGVGLCTVPLSMVAAATVEHRRRDLSLSAGGAPPRAMSVLWIVPQFLVFGVSEMFTAVGLIEFFYKQARGAGMQSFLTALTYCSYAFGFYLSSVLVSLVNRVTASRGGGGHGGWLGDNDLDKDRLDLFYWMLAVLSVINFFCYLLCARWYNSGGADDGCDASASAQVAAEGDGNGKEII

Function Protein NRT1/ PTR FAMILY 4.4 [UniProtKB/Swiss-Prot:Q56XQ6]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsARC_04g0014520 OsARC_04g0014520.01 Chr04 20653839 20658965 - NAM
CDS seq

ATGGATGTGGAGAGCTGCGCGTCGTCGTCGCCGCCGCCGGATGCCGCCGTCGACTGGCGCGGCCGGCCGTGCGAGCCGCGCCGCCACGGCGGCATGCGCGCCGCCGTCTTCGTGCTAGGGATCCAGGCGTTCGAGATCATGGCGATCGCGGCGGTGGGGAACAACCTGATAACGTACGTGTTCGGGGAGATGCACTTCCCGCTGTCGCAGGCGGCCAACGTGCTGAAGCCGCCGCCGTGCAACATGGCGGCCACGGACGGCGGCTGCGAGCAGGCAAGGGGCATCAAGGCGAGCATCTTCTTCGCCGCGCTCTACCTCGTGGCGCTCGGCAGCGGCTGCCTCAAGCCCAACATGATCGCGCACGGCGCCGACCAGTTCGCGGCCGCGGCCGGCGGCGGCGGCGCCGCCGCGGCGGACAATGCCAAGAGGCTCTCGACCTACTTCAATTCGGCCTACTTCAGCTTCTGCGCCGGCGAGCTCGTCGCGCTGACGGCGCTGGTCTGGGTGCAGACGCACTCCGGGATGGACGTCGGGTTCGGCATCTCCGCCGCCGCCATGGCGGCCGGGCTCGTCAGCCTCGTCTCCGGCGCCGCCTTCTACCGGAACAAGCCTCCTCAGGGCAGCATCTTCACGCCCATTGCAAGGGTGTTTGTTGCCGCCTACACCAAGAGGAAGCAAATCTGCCCTTCCAGCTCCTCCGATCCCGTCAATGCCGGCGTTTGCGAGCCGGCGCACCTCGCCGGCGGCAGCTTCCGCCACGCCAGCAAGTTCAGGTTCTTGGACAAGGCGTGCATCAGGGCGGCGGAGCAGGGGCCGAACACGAAGCCGGAGAGCCCGTGGCGGCTGTGCACGGCGGCCGAGGTGCGGCAGGCCAAGACGCTCCTCGCCGTGGCGCCCATCTTCGCGTGCACCATCGTCTTCAACACCGTGCTGGCGCAGCTGCAGACGTTCTCGGTGCAGCAGGGGAGCGCCATGGACACCGCGCTCGGCGGCGCCGGCTCCTCGTTCCGCATCCCGCCGGCGTCGCTGCAGGCCATCCCCTACGCCATGCTGCTGGCGCTCGTCCCGGCGTACGAGCTCCTCCTCGTCCCGCTCATGAGGCGCGCCACAGGGGCGCGGTCCGGGATCACCCCGCTCCAGCGGATCGGCGTGGGCCTCTGCACCGTGCCGCTCTCCATGGTCGCCGCCGCCACCGTCGAGCACAGGCGCCGCGACCTGTCCCTGTCCGCCGGCGGCGCGCCGCCGCGGGCGATGTCCGTGCTGTGGATCGTGCCGCAGTTCCTCGTGTTCGGCGTGTCGGAGATGTTCACCGCCGTGGGGCTCATCGAGTTCTTCTACAAGCAGGCGCGCGGCGCCGGCATGCAGTCCTTCCTCACGGCGCTCACCTACTGCTCCTACGCCTTCGGCTTCTACCTCAGCTCGGTGCTCGTGTCGCTCGTGAACCGTGTCACGGCGAGCCGCGGCGGCGGCGGCCATGGCGGGTGGCTCGGCGACAACGACCTGGACAAGGACAGGCTGGACCTCTTCTACTGGATGCTCGCCGTGCTCAGCGTGATCAACTTCTTCTGCTACCTGCTCTGCGCGAGGTGGTACAACTCCGGCGGCGCCGACGACGGCTGCGACGCCTCCGCCTCCGCTCAGGTCGCCGCCGAAGGCGACGGCAACGGCAAGGAGATCATCTGA

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Protein seq

MDVESCASSSPPPDAAVDWRGRPCEPRRHGGMRAAVFVLGIQAFEIMAIAAVGNNLITYVFGEMHFPLSQAANVLKPPPCNMAATDGGCEQARGIKASIFFAALYLVALGSGCLKPNMIAHGADQFAAAAGGGGAAAADNAKRLSTYFNSAYFSFCAGELVALTALVWVQTHSGMDVGFGISAAAMAAGLVSLVSGAAFYRNKPPQGSIFTPIARVFVAAYTKRKQICPSSSSDPVNAGVCEPAHLAGGSFRHASKFRFLDKACIRAAEQGPNTKPESPWRLCTAAEVRQAKTLLAVAPIFACTIVFNTVLAQLQTFSVQQGSAMDTALGGAGSSFRIPPASLQAIPYAMLLALVPAYELLLVPLMRRATGARSGITPLQRIGVGLCTVPLSMVAAATVEHRRRDLSLSAGGAPPRAMSVLWIVPQFLVFGVSEMFTAVGLIEFFYKQARGAGMQSFLTALTYCSYAFGFYLSSVLVSLVNRVTASRGGGGHGGWLGDNDLDKDRLDLFYWMLAVLSVINFFCYLLCARWYNSGGADDGCDASASAQVAAEGDGNGKEII

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.032788 0.106505 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_04g0441800 RBH 0.231526 0.237042 0.417283
Nipponbare | IRGSP 1.0 | MSU LOC_Os04g36040 RBH 0.192596 0.216211 0.131625
Nipponbare | IRGSP 1.0 | RAP-db Os04g0441800 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_04g0014360 RBH 0.0 0.0 0.649470
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_04g0015200 RBH 0.117008 1.903889 0.890713
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_04g0014950 RBH 0.0 2.382711 1.147913
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) NA NA NA NA NA
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_04g0014850 RBH 0.607213 6.864435 3.269049
Minghui 63 | MH63RS3 | HZAU OsMH63_04G0342900 RBH 3.4157285 12.205787 4.753471
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_04g0017350 SBH 0.000000 0.962984 0.395520
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_04G0338900 RBH 7.76006 10.5775585 1.5837065
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_04g0014310 RBH 0.076179 0.024209 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_04g0014090 RBH 0.0 13.877388 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_04g0014050 RBH 3.939351 7.485456 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_04g0014680 RBH 0.170705 0.943582 0.741873
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_04g0014890 RBH 0.149957 0.653350 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_04G013930 RBH 0.0 0.0 0.169788
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_04g0013960 RBH 0.646777 11.024169 0.721560
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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