Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsARC_03g0023390 OGI:07045590 | 14/16 ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) Chr03:21463219-21470088
Gene Symbol OsFbox153
DNA seq

GCAACGACTTAAAATTTATTGTAAAACAAGGCTCAACACTGCACCAAGTAGCGTGCGTTGCTTCGTTCTCACAAGACATCATTGACAATAAAATGCTGGAAATCGTGATATCACATACATATTAAACTCCAAAATAAAGTGCCACATAAGGCACATCAAAGCGTGGTACCACCTTACCCACCATTTGATTGACAAGTAACCCAGACAAATGTTGAAATTTGACGAGCAGGTAGGATTGTCAATTTAACTTAAGTCACAGTTTACTGCATCAGGAAGGTTGTGAAGGTCCAGCCAGCCAGTCCATGACTCTGTGCTCCATCACGCACTTACAAGGCTCTTGAGGATTAATGCAATGTTCACCACAATTCGAACAGTCCGTGAACTCCCCAAGCTCAAATTTTGAGTTCCAGATGAAGATGTTCAGCCGAGAAGCTTTTTGGAGCACAGCACTTGATATTGCCGAAGTCTCATAACCAGATATGTCCAAGTACTCAAGCTCCTCTAGGCAATCAAGGAATTTTATTATTGCAGCACAAGACATATCAGAGTTTGGTATCTCAAGCTTCTTCAGACGTGGAAGGGAGTTGCAAATGATTGAAGCCATCTCTTCGTCGACATAAAGAGCAAACACCTTCAACTCCAGAAAATCTGGACAACACTGATGTACATGGCTGAGAACATCGTGATTAATAAGACCCTCATCCACTGCCATGCCTTTAAGAAATTGTAATTTGTCAATTGCCTTACGGAACTGATCATAAGTTATACATGTGGCAGGAAGGCTGAAATAGTGCAGATTTGGATTCCTGCAGAAAAATAACATGAAATACACTTAGTCCATGGTTAACCATAACAATATTTCCATAAATATCTGGAAAATAACTGTTAGCCAATTTGGCCAAAAGTATCCAGACGAAACAAATAGCGCACTGCCACAAATAATTACATACAAATGATACCTAACACAAAATGCCATAAGAGTATTATGAGGAACAGAACACACTGCAAAACCACATGTAATTGAATCTCAATTCAATGTTGGATAGTTTTGGCCTTAAGCCTCATCAAAAATACCATTTATCACATAATTCACAACGTTCTGACAAAAAATATTTGACAAGCATTACTGAATCAGAAATAGCTAGTGAAAAGATGGAAAATTTGACTAATATCGCAATAAAAGGAGTGAGATTTGCTTGGGTCCCAAAAAGGCACGTTCACGTGATAGATTGTTTCTCCAACACTATGAAAGAAAAATTAGGGGCGGTTACCAGCCAGAGGATATAAATTCAAATTTGAAACCGGAACTTTAAATTTGGAAATGTATCAGCCGGTTACCAGTCAAAATTCAATTCTTTTATTAAATTTCTACCCAGTAGCTGGCATAGTTATTGAGACTGGACCGGCAATCTAACCGGCGAAGCCTTTGGTTCAACGGTTCATTGGTCTGACCAATTGAACCCCTGGTCTAAAGCAGTTCAATAATGTTTATATAAACTACTGATTCCATTCAAACATAAGGGCAAGCTTAGCCTGGTGGGAAGGTGCGTGGCTTCCTTGCATGTGCTCCTAGGTTCAATTCCCACCAAAATCCTTTTTTGTCAATTTTCTCCACTCATGTCGCTCATGCATGCACGCGCCCCGCCATAGTTAGCATCAATCGGCGGATCAAGGACTGGTTTTCTAGCTGGTTTTAACGAAAAACCGGACGGTCCATCCAATTTCTGCCGAGTCAATTGCACAGCGATCTTTCATCCGGACCAGACCGGTGGAGGCTCTGGTTTCGGTTTTTTCCGGTCCAACCGCCGGTCCGGTCCGGTCCGGTCTCAATAACTATGGTAGCTTGCAGTCTCCGCAGACCGCAGGTCACCAGATTTCACTGGGAACTGGATCATCTGACATCCAAGAGGCATCTTAGGGTGAAATGTTGCCTACATATATCTACTGTCTAAATTAATCCAATGCCCGGGGTTCATTCACAAAACTTTTTCTTAAAGAAATCATTACTTTTTTCTTAAAGAAATCATTTTGGAGGGAAAATAATAGAGTAATCATTTATGGCACTAAATTGGAAATGTATGAGATGACTTCTCCTAGTTCTTTGTTTGAGCAGATCCGTAGAACACGAGAAAAAAAGAACTACAGGGGGCAGAGAGTATTCGCGCTAACTGCTAACATGCAAAGAGCACAATGCTCCGACATCATTCTAATGGAAATTCAGAGCAAAAAGTTTAGGAAGCTGCTGAATCGGGAAGAGTTGAGACAGGTTGGTTGATTGACCAACCTCTTTCATCGAAGCCACTGCCATCAGAGGAGTCGGGATCATGAGTCCAGATGGTCAGTGGCTCAGTGCAACAGCATGAGGCCTGAGCAATGGCATGCACTGTTCACCAGAGCACTGATGGTGTAACCAGACGGCACATCAGAGTGCACACGCAAGGGAAATGGCATCTTTACGCTGCAGCAAGTTTCACTCTGGCACTAGTAAATGCTATTTGGAAATAGAAGTTGAAAGCTGTACAGTCATTTGCTGATGGTAGGGGAATCATTAAACCAGATGATATCTTAGTAGAAAATGGCCGTTGGATTAATTTTGACAATAGATGTGTAGGCTACACTTGCTTCCATGTGCCTCCTGGACATCAAAGGAGATAGTAACATTTCACTGGGTGGCCAGTAATTCCAGAAATACTGAATAAACTTATTCTGAACTCCGAACCTTGTGGACAGCACATCCCACCTGTATGTAGCGGTGACTGTTATATCAGGATCCTAGGCAGTATTTGTTATCGTCTTTAATATATTACGAATGCAGGATTGTTTCGTAGTAGTCTATCCGCCTCACAATGTCTCTATGTCAATATTAGTGCATTACAGAATTCAAGATGTTATTTCAGTGTTTCCATACTCTCAGTAATTAAACAGTTTGAAAGAGGTAAAGTGGTTATAATAAGGAGAAATACTGTGAAATGGAAGGGCATCATTGTATTTGTAGGATCATGTGAGATTCTCTAAGATCCTACCAATTGTTGTGACCGACGGAAGGAGTCGAACCAACTTCCGTGTCGCTCCCACGGAGCAACCCGGGAGACCAAAAAACTTCGCCACCAAGGATCTCCCACCGGCCGACCCTGCTGCCACCGGCGAGGCTGTCACCGGCGGTGGAGCCGGCAGCGGCGCCACCCCCGCCCTCCTTGTTTCCTCTCCATCATCTCCTTCTCCCCTTCTTTTCCTCCCCTTCTCCTTTGGTTCTTCAGATTCAGTTGCAGTTTTTCAAATCCTAGCCATCACTACGATGCTCTGTATTGGCTGGAGGTGTGGCGCCCTATGGTTGGCTGGCGGCGTGGCTTCCTCCTCCGTACTCCTGGATGGGGCGACATGGCAAGACTCGCCTGGATCTGGCAAGCAGCACAGCGGCGGTGATGCCGACAGAGGTGGCGGCGGCGCCCGAGGTGGCTGAGGGAGGTGGCAGTGGAGGCGGTTGCCAGTCAGCTAGGAGCTCCGGTGGCGGCCGTGGTTGCTGTGGCGGCGAGGACCAGCGTACGTGGTTAGTGGCGGAGTTGGGCAGAGACGGGGGCTAAGCCCTCCATCCCTTCCTCTGTCATCGGCGGAATTGGTGGGCAGCAGAGATGAGGGCTAGTCCCCTGTCCCTTCCTCTGTGACCGATGGCGAGGACTAGCAACGGCGACAGACTTGGTGGGCGATTGCGTTGGATGGAGATAGGGGCTAGTTCTCCATCCCTTCCTCCGTCGCAGGCAACGTTGGTGGGCGGCGGCGGTGGCGCCATCGGGCAGAGACAGGGCTAGTCCTCCATCCCTTCCACGGCACCTATAGCGAGGGTTAGCGACAACGGGCAACAGTGGGGGCTAACCCTTCTCCCTCGATGGCAGGTCAGTTGTTGCACATGGCGACGATGGTATATGGTCAGGTCAGCCACAGTAGATGGAGAAAACCACAGCGGAGACTCTCGGTGACGGCATTCTAGAGGCGGCAGCGTCTAGGCAAGCTCCAGCGCTCGGATCTGACCACAGCCAGGTGAGGATGGGAGGACGGTGGGTGTCAGTGGCTATTGATGTGATGGTCGTTGGCTCGCCTGACGCGGATGAGGGCAGTGGCAACAGAGACTCTCGGCAGCGGTGTCCTACAGGCAGCAGTTGCCAAGCGAGAATCGACGCCAAGGTCTAGCTGCGGTTAGGTGTTTGACGCCGTGAGCTGATGGCAGTAAAGTCAGTTGCATGTTATGCTGGACGGCTTCGCGTTGCTCTAAGAGCGACAGTGAGTTCGACAGTATGCGCAAGATGATGGTGGCGCAGCAGAGCAACTCAGGGTGCAGTAGTGGCGTTCGGAATGCAGTGGCAGCGTAAGGGGTTTTGGACGATGATGGCGGACAACATCAGTTGGCAACAGATGGTGTTGTGATCTGCAAAGACGGAGATGGTGCGGCGATGGGCAGCACGGACTTAGTTCCAATTCTCCTCTTCCACCCTCTCGCACTAAGGTGGAAAGTTTAGGTTGTCGATGAAGGTTTAAGCTAAGTCTTCAAGCTTTTCATTTTTTTTGTGTGTGTGTTTGTGTGTATTCCTTAGTGTGAGGATTGGAGTCTAAGAACTAGTGCATGTTTTGGTTGTGTATATTCTTTATGGATATAGAGGACGGATTAATGAAAATCCATTATCTAAAAAAACATTGTAGGATCATGCACTGAAATCAAACACTTGCTACCACATCCAGACATTGTCGAATTTCCATGCACTAGCTTACATTTCCATTTAGACTTATTTTGAAGAGAACATTTAATTGTAATGTGGCATGGTGGCAGTTCCAAATTGTTATCAGTGCAGACATAGACGTTTTGCCGATTTTTTCTGCTTGCCAAACTTAAGACACAATGAACTCTTATATTAGAGTGTCTATTCCTTAACATAGCTAATAGAGTATTGAACACAACTAACGGGTAGGAAATAGATTTTGAATGCAACAAAATAGCCAATAATGATATGATACAGTTAATAAAGCAAAGGTGTTGTTGCTGGTTCGCTACTTATCCTTGACTTATGACCAGCCAGCCAGCCAGGAATGGCAATCATATATTTGACGGTGGCAAACTATCTTTCAATTTTATTATTATGCCTCGTGAAAATTATAGAGCCATCCTAACTCCATAAATGTAGTAGTTGAACCCCACAAAAGAAAAGCAATTTTTTTTTCATATTGTTTCTAACTAACAGTAAAAGTGATAGATCACATTCTCATGGTTATGAAAAATCTGGTGACTTCACTGCAAATTCTGTGCAAAGTGCAAACACATGTTTAGATATCTGGAGAACCTATCTCATGAACATATTTGGAAAAGCACAATACAACTTAAGTTTAAATATGTTGAAAAATTGAACAGGGAGTCATTTGAATAACTTGTGGGGGAGAAACTGGGTTGGGAACCCTGCAAGCTCTTTGTTAACATATCACAGACAAACAATAGAAAAGTATCATTCCAGGTGTAGTGGGCAAAGTGGTCCATACCACTACGAGCATTTGTCTTGTGACATAGGCTGTTTCTTTAGTTCATTTCCATTACTGGGTAACCAAAAAAGTAACCTGTAGAAATTTTTCTCATATGTTCGTTTAGCAGCCATTCTTTGAAAAAAAAAAGGATATTGTTTTGAAAGAAGGCAGTATGACTAAGATGTCCTGGTATCATAACCTTCCATGCTTGTACATTCCTACCGTTCTGGAAGGTATATTGAAAAGTGAAACAGCAATAGTATACTTGGTGTGGAGAAACTTCCCACCACAAGCAATGGGCTCCTATAGTCCTATACCAAGATCCATGCATGACAAATTGGAAAAGCATTGAATACAGTTTACCGCTCAATGGAAAGGTGTTCTTTTGTTCACAGTACAGTCTGGCCTTTTTCCTGTTTAGGGTGACTGCAATATGGTGAAGCTATTAGCAAAGATATCCTAATAGTCAGGTAGGTTAGAGGATATCTGGGATAATTAGGTCCCAAAAGATGCTCTGGGACATCCTTAATTCAGGGAAAAAAAGAGGATTAATTTCGTTTAAACGTGATATTTCACCATTCAAGTCAGGTGAACCCAATCCATCTAAATTCCAACACTGAAACAACAAAAATGAAATTTTCATCCCATTATGACAATAAGATGAAATTTCCCATGAAAAATGAATAGAACATCTGTTGTGACATCATTCCTTTTAAGGTTGCAAGAATTCAGCATTTCTATCTATCTACAGTACCAAAGGACCACAATGAACTAAGAAAATATCTCTCTTTCAACCAGAAATGAGCGGATTTGGGAGGAATATACACTAATTTCGTTACGGGATCTTCACATCAATCACAAAACATATACTAAAGAGACAGTGAGAAGGAGGCGTTACCTCTGAGCGAGGAAGAGGAGGTGCTCCTCATCGGCGAACTCCGGTAGGAGCAAGGCCTCCATCCGACCGGCCGCCCGCCGCACGACGATCTCCAGCACACTGCAGAGAGCGGCTTGAAGAGGGACACGCCCGCGCCCGGCGGCTGCTGCTTCACCGTCTCCCGCAGCGAGCCGGCGCCGGGCCGAGGTCAGGACGGCCCAGTCGCGGAGGTCAACGCGGCGCCACACGAGCGGGTCGCGCGCCGAGGCCCGCCATGCGGAGCAGGCGCGGGTGGCGCCGCCGGAGAGGAGATCGGGGAGGCCCACCCGGGACATGATCATCACGAGCAGGTCGTGCTGCAGGTCCGCCCATGGCCGGACCGGCGGCGACGACGACGCCATCGACGACGGACGGACGGGTGGACAGCGACAGCGCAGGTATAGGTTTCTTTTTTTTTTTTGAGAGGGGCGCAGCTGTGTTTGCAACCTTCC

More
CDS seq

ATGGCGTCGTCGTCGCCGCCGGTCCGGCCATGGGCGGACCTGCAGCACGACCTGCTCGTGATGATCATGTCCCGGGTGGGCCTCCCCGATCTCCTCTCCGGCGGCGCCACCCGCGCCTGCTCCGCATGGCGGGCCTCGGCGCGCGACCCGCTCGTGTGGCGCCGCGTTGACCTCCGCGACTGGGCCGTCCTGACCTCGGCCCGGCGCCGGCTCGCTGCGGGAGACGGTGAAGCAGCAGCCGCCGGGCGCGGGCGTGTCCCTCTTCAAGCCGCTCTCTGCAGTGTGCTGGAGATCGTCGTGCGGCGGGCGGCCGGTCGGATGGAGGCCTTGCTCCTACCGGAGTTCGCCGATGAGGAGCACCTCCTCTTCCTCGCTCAGAGGAATCCAAATCTGCACTATTTCAGCCTTCCTGCCACATGTATAACTTATGATCAGTTCCGTAAGGCAATTGACAAATTACAATTTCTTAAAGGCATGGCAGTGGATGAGGGTCTTATTAATCACGATGTTCTCAGCCATGTACATCAGTGTTGTCCAGATTTTCTGGAGTTGAAGGTGTTTGCTCTTTATGTCGACGAAGAGATGGCTTCAATCATTTGCAACTCCCTTCCACGTCTGAAGAAGCTTGAGATACCAAACTCTGATATGTCTTGTGCTGCAATAATAAAATTCCTTGATTGCCTAGAGGAGCTTGAGTACTTGGACATATCTGGTTATGAGACTTCGGCAATATCAAGTGCTGTGCTCCAAAAAGCTTCTCGGCTGAACATCTTCATCTGGAACTCAAAATTTGAGCTTGGGGAGTTCACGGACTGTTCGAATTGTGGTGAACATTGCATTAATCCTCAAGAGCCTTGTAAGTGCGTGATGGAGCACAGAGTCATGGACTGGCTGGCTGGACCTTCACAACCTTCCTGA

More
Protein seq

MASSSPPVRPWADLQHDLLVMIMSRVGLPDLLSGGATRACSAWRASARDPLVWRRVDLRDWAVLTSARRRLAAGDGEAAAAGRGRVPLQAALCSVLEIVVRRAAGRMEALLLPEFADEEHLLFLAQRNPNLHYFSLPATCITYDQFRKAIDKLQFLKGMAVDEGLINHDVLSHVHQCCPDFLELKVFALYVDEEMASIICNSLPRLKKLEIPNSDMSCAAIIKFLDCLEELEYLDISGYETSAISSAVLQKASRLNIFIWNSKFELGEFTDCSNCGEHCINPQEPCKCVMEHRVMDWLAGPSQPS

Function F-box/LRR-repeat protein At3g48880 [UniProtKB/Swiss-Prot:Q9M2Z5]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsARC_03g0023390 OsARC_03g0023390.01 Chr03 21463219 21470019 - NAM
CDS seq

ATGGCGTCGTCGTCGCCGCCGGTCCGGCCATGGGCGGACCTGCAGCACGACCTGCTCGTGATGATCATGTCCCGGGTGGGCCTCCCCGATCTCCTCTCCGGCGGCGCCACCCGCGCCTGCTCCGCATGGCGGGCCTCGGCGCGCGACCCGCTCGTGTGGCGCCGCGTTGACCTCCGCGACTGGGCCGTCCTGACCTCGGCCCGGCGCCGGCTCGCTGCGGGAGACGGTGAAGCAGCAGCCGCCGGGCGCGGGCGTGTCCCTCTTCAAGCCGCTCTCTGCAGTGTGCTGGAGATCGTCGTGCGGCGGGCGGCCGGTCGGATGGAGGCCTTGCTCCTACCGGAGTTCGCCGATGAGGAGCACCTCCTCTTCCTCGCTCAGAGGAATCCAAATCTGCACTATTTCAGCCTTCCTGCCACATGTATAACTTATGATCAGTTCCGTAAGGCAATTGACAAATTACAATTTCTTAAAGGCATGGCAGTGGATGAGGGTCTTATTAATCACGATGTTCTCAGCCATGTACATCAGTGTTGTCCAGATTTTCTGGAGTTGAAGGTGTTTGCTCTTTATGTCGACGAAGAGATGGCTTCAATCATTTGCAACTCCCTTCCACGTCTGAAGAAGCTTGAGATACCAAACTCTGATATGTCTTGTGCTGCAATAATAAAATTCCTTGATTGCCTAGAGGAGCTTGAGTACTTGGACATATCTGGTTATGAGACTTCGGCAATATCAAGTGCTGTGCTCCAAAAAGCTTCTCGGCTGAACATCTTCATCTGGAACTCAAAATTTGAGCTTGGGGAGTTCACGGACTGTTCGAATTGTGGTGAACATTGCATTAATCCTCAAGAGCCTTGTAAGTGCGTGATGGAGCACAGAGTCATGGACTGGCTGGCTGGACCTTCACAACCTTCCTGA

More
Protein seq

MASSSPPVRPWADLQHDLLVMIMSRVGLPDLLSGGATRACSAWRASARDPLVWRRVDLRDWAVLTSARRRLAAGDGEAAAAGRGRVPLQAALCSVLEIVVRRAAGRMEALLLPEFADEEHLLFLAQRNPNLHYFSLPATCITYDQFRKAIDKLQFLKGMAVDEGLINHDVLSHVHQCCPDFLELKVFALYVDEEMASIICNSLPRLKKLEIPNSDMSCAAIIKFLDCLEELEYLDISGYETSAISSAVLQKASRLNIFIWNSKFELGEFTDCSNCGEHCINPQEPCKCVMEHRVMDWLAGPSQPS

More
Gene Transcript Chromosome Start End Strand Source
OsARC_03g0023390 OsARC_03g0023390.02 Chr03 21467778 21470088 - IsoSeq
CDS seq

ATGCTTTTCCAATTTGTCATGCATGGATCTTGGTATAGGACTATAGGAGCCCATTGCTTGTGGTGGGAAGTTTCTCCACACCAAGTATACTATTGCTGTTTCACTTTTCAATATACCTTCCAGAACGGTAGGAATGTACAAGCATGGAAGGTTATGATACCAGGACATCTTAGTCATACTGCCTTCTTTCAAAACAATATCCTTTTTTTTTTCAAAGAATGGCTGCTAAACGAACATATGAGAAAAATTTCTACAGGTTACTTTTTTGGTTACCCAGTAATGGAAATG

More
Protein seq

MLFQFVMHGSWYRTIGAHCLWWEVSPHQVYYCCFTFQYTFQNGRNVQAWKVMIPGHLSHTAFFQNNILFFFKEWLLNEHMRKISTGYFFGYPVMEM

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.030858 0.344403 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_03g0562200 RBH 0.0 0.0 2.955633
Nipponbare | IRGSP 1.0 | MSU LOC_Os03g36439 RBH 0.0 0.0 0.658014
Nipponbare | IRGSP 1.0 | RAP-db Os03g0562200 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_03g0023470 RBH 0.314529 10.257270 4.069667
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_03g0023320 RBH 0.0 3.590450 1.533440
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_03g0023350 RBH 1.334445 6.458766 3.015200
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) NA NA NA NA NA
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_03g0023180 RBH 3.405984 15.509124 6.522937
Minghui 63 | MH63RS3 | HZAU OsMH63_03G0343800 RBH 2.9201755 12.5689125 9.893421
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_03g0022950 RBH 0.080229 0.465499 0.613159
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_03G0345000 RBH 3.9925955 15.2179035 13.5500385
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_03g0023220 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_03g0023270 RBH 0.0 5.001719 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_03g0023320 RBH 3.842805 8.595008 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_03g0023160 RBH 0.601746 0.625311 0.381773
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_03g0023020 RBH 0.0 12.545087 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_03G023040 RBH 0.096239 5.132584 0.931870
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_03g0023000 RBH 0.320156 18.531799 5.989689
Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.