Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsARC_02g0035760 OGI:02094100 | 11/16 ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) Chr02:33230454-33237362
Gene Symbol -
DNA seq

gcatactctacaatttccttttgagttatcatctgtgtatttgaatcaagtgttcattacaaactgatggggattaaaggaggaaaaaggaaaataatttctgcaaaatgtcgaataatacccaaaaaaatatatatagtagaaaccatttcattccccaaaattaaccaacaatgtataacgcatgtccaattccaatcgatggatcctctgtttctagtttatcttgtagaactttgagggctcgaggcccttggtgaagttgaagtacttgagcgtctcggcccagcgcgggttgtccttgaggcggtggacggcgatggtgtccgggataaactcgtgcgagcacttgtccaccggcgccggcagcgggtagtcgtacatggccggcttggcgttgaacctgttcttccctctCcccccgagccgcagccactgccccgtcatcctgtcctccggccccacggtgcggttgcgcggcacgtcggaggtcgccacccactcgacgacgtcccacgacagcgcgtacgccatgccggacatgtactccctgaacgggtccatgctgccgcacgggatggtggcgccgtagtacgcgtcctcccgcggcatcgcgcccagggaggccagcagccgcggcagccggaggaagatgtcgtcgtcggccttcatcacgtagtcgtaggggtcgtcggcgtacagccgcgccgccgcggagaagaaggcgtacgtcttgccgccgttgaggttctcctcgcactcgtcgaggacgatgatgtcgccgtggcggaggatctcgagcgggacgaggacgcgctggtcgtccttgtagaggcggcagaagacgaagcggacgtcgacgtgcgcggtcaggtcgccggcggcgagctggaggccgtacaccatgcgaaggaggtgccggcgctcgtagttgtcggcgcgggtgagcacgccgatgaggaggcggaagtcgggcttccgcgacgccggtggctccccggcgaggcggcgcggcgccgccgtgtacgcccccgccgccgtcgtcggcccgcacgagctcatcatgagcgcctgcagctcgaactccttggggtagacgaagaggtagatgaacccgaggagcagcagcggcagcagcaccagcgccttgcttgacgccgacagcttggggaagccatgcttagagctcttcgccggcggcatggcaggcaagagctcgagctcgacacagtcgtcgtcgtcttcgtcgtcgttgctgctgcgattcaagaagctctccttgtgatccagagattgctgtgaattgaattgtaaatgcgtgcaattgggtggcgcgagtgatatgatgctaaggcggaggcggatcgccggtgctttggccggtttgagatggagctccatgtgcgtgacgggggagcttggtttgtacggcaatggcgccctttgcgtaaatcttggggacacgagaggcgtacgtgggactgcgtggcatgcgaggtagtcaacgcctacagattacagtacaacgaacgcgtcggattgcatggattcacgctgcggcggatgaataaactagataaaaatatagccccttgatatctacatgtagcaaaaaagatttagctacggaggctcctatagtacttgtttcagtggtgggggttcgagaccccaccgcccctatactggattcgtccttggattcacgcagttggcgtttcacaggatcacacagcttattaactcgtcaggagggattaatttggagatgcacttgatagagtagtggaaagtagtgtgaggttcaatcctcaagtatcgttttcaatccctaatatactcatatattttttgttgaaaaatgtttggaggtaccgtataggctaattaactgatcaggtgtgtgtttttggatttcaaTtttgagatttgggaattcagtaaaccgtgagcgatggcattttacagggttaattatttgttgctcgtttacctatgatccacattggcatatcactatatcggtacattttttttcatttttttgcttctttaatttgcttgcggcatatgcaggagttagatggctgtatatatgagtcaagattcaaagtccaaactgatactttgacaactcaatggcgccttgcgtgacaaagagaccactgccgcgatactcagggcatcttgaacctgaacaagcttaatcagtgcctttgctaaatcttgacggcagctagcatagcacaacatgattgcatttgtaatcaattttgtataatgcacatgccgcacatagatttacacgaacgcaacgtcaaccaggctagagaagattttgtataatagttagtagtaatttcgattgcttgaatgaaataaagcacccaggaggccaggagcgaactacagtatatatctatcagtttgcacctacttgctcagactgctccgtccctctgcatctttcaggtgcgtcatgcgtgcgtgcgtctcgccggctcgccgctgtccatgtgttccccgtgcagttgagcgcgatgacgatgtcgccgtcgacgccgtgggcgatgttctcgagcaccgccggtgccgcgtcctcctccgatcctccactgggtgaggttgcacacggggaagatgacggtgcaagcagccaagcaggcaccgacgagagtacaagtcggctcaggtgagcacgccgagcagcagcgaacagaagtgatggtttgttgccttgttgccgtcggcaggccaccaacgctgggcggcgggatttttcacgacggggaggaagaaatcaatgtgggatgagaagacagcgaaatggaccatggcccatgggccgggaaagggagcacttgagagagaggccagagggccatggcatcaaaccctcatttcaatcggttaatatgtatgggtctgtttggcacagctccagttttagaagaaatggagtttgagcttagccaaacagtttcagctctatctaaaatgggagcaaagctaggtggagcgttctcacagaatgaactagagaggtggagctgggtttagactgctccacaactccactctagacccaactcaatttaggagttggagctctactaaacagatcctagtccctccgtcgtatattgatgtaacatcgtagtactacgaatttgtatgtgttcatgtttagattcgtagtattagaatatgtcacatcgatgtacgaggttggtttattttagaatggagggagtatgcctcaatactatttttgtggattctttccggtaggatttcgtgttgaaactagatctcatacaagactcgggtcttgctgctctctccttattaattgtactatcatcttaccttttatcctacatgacctgctatagtgtgatagactctagcaaatgtgaagcactagaaatgaccttagagaaagactaataatacaattagctgcttactgtatagaaTtttttttacgaagaagagcaaagatatattactcaaccaacagagtccttacagagaatgtgagatatttggctacaagaatcagagagatgatcaacacgagctttactaacatatggctggcttgattctgggatctctgtatcttcttcatagttactcccctctcatcatgcaacaaacaaatctttatagtctacctctcagccaactcatataagtggttagctatgaactataaatgtatggtccacctgtctctctcacatattttcttggttcctgtacgtaagccggctataagcttacacccgcttctcctctctctcctctcctctctcatccacctcagtatttagcattcttacaacatcctattatacttgctcttattaggttgtgggatgatttgaagatagagagaagaagagcaccgtttagatcggtggtggagaaacaagatgaccagatcggtggtaatggcaattcagtcctgttttgggaggataattggggaggaaggaccagatcgcagcagtatcctagactgttctcttttgcgaagaataaacttgattcagttgtttcctacttctctagagacctgcatgacaactttcaccttactctctcagttcaggctttccaggaatatgaggtttttgagcaggaactatctgccattcacctttcgataaaccatgatgtatggattttatgtttggagcacggcacaatatacttccagcaggttctacaaattgcttttctggagcatctccccccagcaactttacctttaatttggaaaagcaaagttatgatgaaaatcaaggtgtttggttggttatttctgatggacagagtaaatacaatggatcttttggatagaaaacactgcaagcctcccaatgcttccatcatttgtcaatcttttcagagcaatcaaagagagactatggaacatatgttcttctcttgtcaatttagtgcgggttgctggagttctattggtttccattggaactttaatctcagttttcatgatatgattcttcaccagagagcaaattttgggactctgtgtttcatggaaatcttcctcttagcggcttggaatatttggaaacacaagaataatctggtcttcaattctatcatgccctcgaccttaagctggaaatctgctcttaaagatgacctaagtctacatttacttagacttagagatgaccaaactctttttattcagtcatggatgtctcccttgtaatttctttgtaatttagtctttttgtactctcaactctttcataatatataccgtaggggcttcccctactgttaaagtttcaaaaaaaaaaaacaagatgaccgtttagtcctaagaatagaagtatgattgctagtctacttaatttaaacataacaaagcagatgttatacaccttaaaggttaagagcaatgtatattgctaaatcagcccTtttattgcttaaagacagggtctaaaaaatggttccataatgcgtagactttataatgagacacgtgacatatgagtggcctgaatcaggagaaagagaatcccctaatatttttttattacttatgacatgttcatatgcataagggtatctggactactatatatatgaactactcttacataggtaaagcagatcataaataattatatagatcaTtttttttcatatattatggttgccctaaacaatgcaaaataaaatggttttgccaaatcggataactattcttttggtgataggagacgtacccgtcaataacgagacgtccgtagtgacttcgtcaatattaagatatatgtcggtatagtttttcggagatactcatagggatacgatgtacatatgtgtgttcataggattgagtgtgtacgtgttgtgagcattgcgtcgcgtttgtacaaatgtttataaaaaaatataggaaagggtctttatattttaattgactctctttccaatatctatgtcttgatgacaataagatcctgataaggatctgttgaacagaaactaagcttgactcgatgtctaccacgcgcagacttagccttaaacaacttttaacataaagtggtagccatgtatcaaatcaaatcacgccatttgtgtggcaaaactacctatatagcaaccaactgttCtttttaatcattgagtaaattaatttactagtagtagacatctaaacactttgtcatattagcctcctaaaatggaactaaaatagcaatcctgataggatactaggatcacattcattagtcattgtgtcttcaattctactagcgcatatatgcaggtaatttgttgattatgtatttatgtatgcaagttttaaatttgaacactttataacttactgtgcatttaagagaggatatgcacataccgaagaagaaactgccaacagctaatactgacaaataatccgatccctttttttccccttaattttcacaggtctacatggtacagcttggaaggcttaagcccctgtgtggcgttgaagaatttgagcgtgcgcgcccacttgaggcggtccttgagcttgtgcacgacgacggtgtccgccacgagcgcgtggcggaagcagttcaccccctcccgcatcccgccgtcgaggtagtcgtacatccgcgtctcctcgccgtacctgttactccccttgccgccgcggcgcagccaccggccgaacacctcgtcctcgggccccttcacgtcgccccgcagcgcctccgtcgccgccacccacgccgccacgtcccacgacacgatgtaccccatgcccgacatgaactgcgacctcgggtcggcgtggcacggcgccgggaacccgtggtacaggtcgcgccgcggcttgtcgcggagcgtgtcggcgagcgacgccaggcggtagtacgagtcgtcgtcgatcttgccgacgtagtcgtacggcgcgtcggcgaacagcgccgggagggacgagaagtaggagtgcgtcttgccgtcgtccatgttctccgtgcagttgagcaccacgacgtcgccgtgggcgatgatctcgagcgacaccagcacggcgtcctcctccctggcgaggctgcacacgaagaaccggacgtcgacgacggcgcgcgCgggcgccggctggagcgcgtacgccaggcggagcagcgcgcgccgctcgtacatctcggcccgggtgaccacgccgaggagcacgcgcagatccaccgccggccccgtcgcgttcgccggcgtcgccgccacgctgttgctgcacctggcggcgagagatggcaggatactgaagtagccggggaagaagagggagtagacgaacgcgaggagcaagaacgggaggaggaacaaggagaaagaaagcctcttcatggccat

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CDS seq

atggccatgaagaggctttctttctccttgttcctcctcccgttcttgctcctcgcgttcgtctactccctcttcttccccggctacttcagtatcctgccatctctcgccgccaggtgcagcaacagcgtggcggcgacgccggcgaacgcgacggggccggcggtggatctgcgcgtgctcctcggcgtggtcacccgggccgagatgtacgagcggcgcgcgctgctccgcctggcgtacgcgctccagccggcgcccGcgcgcgccgtcgtcgacgtccggttcttcgtgtgcagcctcgccagggaggaggacgccgtgctggtgtcgctcgagatcatcgcccacggcgacgtcgtggtgctcaactgcacggagaacatggacgacggcaagacgcactcctacttctcgtccctcccggcgctgttcgccgacgcgccgtacgactacgtcggcaagatcgacgacgactcgtactaccgcctggcgtcgctcgccgacacgctccgcgacaagccgcggcgcgacctgtaccacgggttcccggcgccgtgccacgccgacccgaggtcgcagttcatgtcgggcatggggtacatcgtgtcgtgggacgtggcggcgtgggtggcggcgacggaggcgctgcggggcgacgtgaaggggcccgaggacgaggtgttcggccggtggctgcgccgcggcggcaaggggagtaacaggtacggcgaggagacgcggatgtacgactacctcgacggcgggatgcgggagggggtgaactgcttccgccacgcgctcgtggcggacaccgtcgtcgtgcacaagctcaaggaccgcctcaagtgggcgcgcacgctcaaattcttcaacgccacacaggggcttaagccttccaagctgtaccatctccatctcaaaccggccaaagcaccggcgatccgcctccgccttagcatcatatcactcgcgccacccaattgcacgcatttacaattcaattcacagcaatctctggatcacaaggagagcttcttgaatcgcagcagcaacgacgacgaagacgacgacgactgtgtcgagctcgagctcttgcctgccatgccgccggcgaagagctctaagcatggcttccccaagctgtcggcgtcaagcaaggcgctggtgctgctgccgctgctgctcctcgggttcatctacctcttcgtctaccccaaggagttcgagctgcaggcgctcatgatgagctcgtgcgggccgacgacggcggcgggggcgtacacggcggcgccgcgccgcctcgccggggagccaccggcgtcgcggaagcccgacttccgcctcctcatcggcgtgctcacccgcgccgacaactacgagcgccggcacctccttcgcatggtgtacggcctccagctcgccgccggcgacctgaccgcgcacgtcgacgtccgcttcgtcttctgccgcctctacaaggacgaccagcgcgtcctcgtcccgctcgagatcctccgccacggcgacatcatcgtcctcgacgagtgcgaggagaacctcaacggcggcaagacgtacgccttcttctccgcggcggcgcggctgtacgccgacgacccctacgactacgtgatgaaggccgacgacgacatcttcctccggctgccgcggctgctggcctccctgggcgcgatgccgcgggaggacgcgtactacggcgccaccatcccgtgcggcagcatggacccgttcagggagtacatgtccggcatggcgtacgcgctgtcgtgggacgtcgtcgagtgggtggcgacctccgacgtgccgcgcaaccgcaccgtggggccggaggacaggatgacggggcagtggctgcggctcgggggGagagggaagaacaggttcaacgccaagccggccatgtacgactacccgctgccggcgccggtggacaagtgctcgcacgagtttatcccggacaccatcgccgtccaccgcctcaaggacaacccgcgctgggccgagacgctcaagtacttcaacttcaccaagggcctcgagccctcaaagttctacaagataaactag

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Protein seq

MAMKRLSFSLFLLPFLLLAFVYSLFFPGYFSILPSLAARCSNSVAATPANATGPAVDLRVLLGVVTRAEMYERRALLRLAYALQPAPARAVVDVRFFVCSLAREEDAVLVSLEIIAHGDVVVLNCTENMDDGKTHSYFSSLPALFADAPYDYVGKIDDDSYYRLASLADTLRDKPRRDLYHGFPAPCHADPRSQFMSGMGYIVSWDVAAWVAATEALRGDVKGPEDEVFGRWLRRGGKGSNRYGEETRMYDYLDGGMREGVNCFRHALVADTVVVHKLKDRLKWARTLKFFNATQGLKPSKLYHLHLKPAKAPAIRLRLSIISLAPPNCTHLQFNSQQSLDHKESFLNRSSNDDEDDDDCVELELLPAMPPAKSSKHGFPKLSASSKALVLLPLLLLGFIYLFVYPKEFELQALMMSSCGPTTAAGAYTAAPRRLAGEPPASRKPDFRLLIGVLTRADNYERRHLLRMVYGLQLAAGDLTAHVDVRFVFCRLYKDDQRVLVPLEILRHGDIIVLDECEENLNGGKTYAFFSAAARLYADDPYDYVMKADDDIFLRLPRLLASLGAMPREDAYYGATIPCGSMDPFREYMSGMAYALSWDVVEWVATSDVPRNRTVGPEDRMTGQWLRLGGRGKNRFNAKPAMYDYPLPAPVDKCSHEFIPDTIAVHRLKDNPRWAETLKYFNFTKGLEPSKFYKIN

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsARC_02g0035760 OsARC_02g0035760.01 Chr02 33230670 33237362 - NAM
CDS seq

atggccatgaagaggctttctttctccttgttcctcctcccgttcttgctcctcgcgttcgtctactccctcttcttccccggctacttcagtatcctgccatctctcgccgccaggtgcagcaacagcgtggcggcgacgccggcgaacgcgacggggccggcggtggatctgcgcgtgctcctcggcgtggtcacccgggccgagatgtacgagcggcgcgcgctgctccgcctggcgtacgcgctccagccggcgcccGcgcgcgccgtcgtcgacgtccggttcttcgtgtgcagcctcgccagggaggaggacgccgtgctggtgtcgctcgagatcatcgcccacggcgacgtcgtggtgctcaactgcacggagaacatggacgacggcaagacgcactcctacttctcgtccctcccggcgctgttcgccgacgcgccgtacgactacgtcggcaagatcgacgacgactcgtactaccgcctggcgtcgctcgccgacacgctccgcgacaagccgcggcgcgacctgtaccacgggttcccggcgccgtgccacgccgacccgaggtcgcagttcatgtcgggcatggggtacatcgtgtcgtgggacgtggcggcgtgggtggcggcgacggaggcgctgcggggcgacgtgaaggggcccgaggacgaggtgttcggccggtggctgcgccgcggcggcaaggggagtaacaggtacggcgaggagacgcggatgtacgactacctcgacggcgggatgcgggagggggtgaactgcttccgccacgcgctcgtggcggacaccgtcgtcgtgcacaagctcaaggaccgcctcaagtgggcgcgcacgctcaaattcttcaacgccacacaggggcttaagccttccaagctgtaccatctccatctcaaaccggccaaagcaccggcgatccgcctccgccttagcatcatatcactcgcgccacccaattgcacgcatttacaattcaattcacagcaatctctggatcacaaggagagcttcttgaatcgcagcagcaacgacgacgaagacgacgacgactgtgtcgagctcgagctcttgcctgccatgccgccggcgaagagctctaagcatggcttccccaagctgtcggcgtcaagcaaggcgctggtgctgctgccgctgctgctcctcgggttcatctacctcttcgtctaccccaaggagttcgagctgcaggcgctcatgatgagctcgtgcgggccgacgacggcggcgggggcgtacacggcggcgccgcgccgcctcgccggggagccaccggcgtcgcggaagcccgacttccgcctcctcatcggcgtgctcacccgcgccgacaactacgagcgccggcacctccttcgcatggtgtacggcctccagctcgccgccggcgacctgaccgcgcacgtcgacgtccgcttcgtcttctgccgcctctacaaggacgaccagcgcgtcctcgtcccgctcgagatcctccgccacggcgacatcatcgtcctcgacgagtgcgaggagaacctcaacggcggcaagacgtacgccttcttctccgcggcggcgcggctgtacgccgacgacccctacgactacgtgatgaaggccgacgacgacatcttcctccggctgccgcggctgctggcctccctgggcgcgatgccgcgggaggacgcgtactacggcgccaccatcccgtgcggcagcatggacccgttcagggagtacatgtccggcatggcgtacgcgctgtcgtgggacgtcgtcgagtgggtggcgacctccgacgtgccgcgcaaccgcaccgtggggccggaggacaggatgacggggcagtggctgcggctcgggggGagagggaagaacaggttcaacgccaagccggccatgtacgactacccgctgccggcgccggtggacaagtgctcgcacgagtttatcccggacaccatcgccgtccaccgcctcaaggacaacccgcgctgggccgagacgctcaagtacttcaacttcaccaagggcctcgagccctcaaagttctacaagataaactag

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Protein seq

MAMKRLSFSLFLLPFLLLAFVYSLFFPGYFSILPSLAARCSNSVAATPANATGPAVDLRVLLGVVTRAEMYERRALLRLAYALQPAPARAVVDVRFFVCSLAREEDAVLVSLEIIAHGDVVVLNCTENMDDGKTHSYFSSLPALFADAPYDYVGKIDDDSYYRLASLADTLRDKPRRDLYHGFPAPCHADPRSQFMSGMGYIVSWDVAAWVAATEALRGDVKGPEDEVFGRWLRRGGKGSNRYGEETRMYDYLDGGMREGVNCFRHALVADTVVVHKLKDRLKWARTLKFFNATQGLKPSKLYHLHLKPAKAPAIRLRLSIISLAPPNCTHLQFNSQQSLDHKESFLNRSSNDDEDDDDCVELELLPAMPPAKSSKHGFPKLSASSKALVLLPLLLLGFIYLFVYPKEFELQALMMSSCGPTTAAGAYTAAPRRLAGEPPASRKPDFRLLIGVLTRADNYERRHLLRMVYGLQLAAGDLTAHVDVRFVFCRLYKDDQRVLVPLEILRHGDIIVLDECEENLNGGKTYAFFSAAARLYADDPYDYVMKADDDIFLRLPRLLASLGAMPREDAYYGATIPCGSMDPFREYMSGMAYALSWDVVEWVATSDVPRNRTVGPEDRMTGQWLRLGGRGKNRFNAKPAMYDYPLPAPVDKCSHEFIPDTIAVHRLKDNPRWAETLKYFNFTKGLEPSKFYKIN

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Gene Transcript Chromosome Start End Strand Source
OsARC_02g0035760 OsARC_02g0035760.02 Chr02 33230454 33231773 - IsoSeq
CDS seq

gcatttacaattcaattcacagcaatctctggatcacaaggagagcttcttgaatcgcagcagcaacgacgacgaagacgacgacgactgtgtcgagctcgagctcttgcctgccatgccgccggcgaagag

Protein seq

AFTIQFTAISGSQGELLESQQQRRRRRRRLCRARALACHAAGEE

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.044687 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_02g0785000 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os02g54370 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os02g0785000 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_02g0036230 RBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_02g0036320 RBH 0.000000 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_02g0036170 RBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_02g0035770 RBH 0.0 0.140881 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_02g0035950 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_02G0545700 RBH 0.0032585 0.0031145 0.019337
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_02g0035770 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_02G0575800 RBH 0.024581 0.01456 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_02g0036040 SBH 0.0 0.098627 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_02g0035850 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_02g0036100 SBH 0.0 1.381064 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_02g0036050 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_02g0035650 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_02G036300 RBH 0.0 0.000000 0.000000
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_02g0036050 SBH 0.0 0.864619 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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