Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_02g0028900 | OGI:02079220 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr02:27971361-27971540 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGTTCCCGGTGGCCAACGCGGAGGTGGCGCCGATGTTGAACCCGCGAGGGTTCGCGAACCTGCTGTGGAAGCAGCTCAACCACCTCGGTAACACCGGGTTCGACCTGGCGCTGTTCCGCGTCAACGCCTACAGCAACATGCTCTACCTCCATGCCGACTCCACCTCGCCTCTCACGTAA |
||||||||||
| CDS seq | ATGTTCCCGGTGGCCAACGCGGAGGTGGCGCCGATGTTGAACCCGCGAGGGTTCGCGAACCTGCTGTGGAAGCAGCTCAACCACCTCGGTAACACCGGGTTCGACCTGGCGCTGTTCCGCGTCAACGCCTACAGCAACATGCTCTACCTCCATGCCGACTCCACCTCGCCTCTCACGTAA |
||||||||||
| Protein seq | MFPVANAEVAPMLNPRGFANLLWKQLNHLGNTGFDLALFRVNAYSNMLYLHADSTSPLT |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_02g0028900 | OsARC_02g0028900.01 | Chr02 | 27971361 | 27971540 | + | NAM | ||
| CDS seq | ATGTTCCCGGTGGCCAACGCGGAGGTGGCGCCGATGTTGAACCCGCGAGGGTTCGCGAACCTGCTGTGGAAGCAGCTCAACCACCTCGGTAACACCGGGTTCGACCTGGCGCTGTTCCGCGTCAACGCCTACAGCAACATGCTCTACCTCCATGCCGACTCCACCTCGCCTCTCACGTAA |
|||||||
| Protein seq | MFPVANAEVAPMLNPRGFANLLWKQLNHLGNTGFDLALFRVNAYSNMLYLHADSTSPLT |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0176500 | SBH | 0.0 | 0.0 | 3.363760 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g46110 | RBH | 0.0 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0176500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0029380 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0029440 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0029310 | RBH | 0.116210 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0005200 | RBH | 0.0 | 0.749360 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0029100 | RBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0456800 | RBH | 0 | 0.267948 | 0.9542505 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0028900 | RBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0484500 | RBH | 0.1098965 | 0.5140425 | 0.7617995 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0029220 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0028960 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0029250 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0029110 | RBH | 0.0 | 0.000000 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0028790 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G029350 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0029120 | RBH | 0.0 | 0.0 | 0.0 |
