Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_02g0015341 | OGI:08061490 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr02:14297120-14297249 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GGAGATTACACAATTCAAACAATTAGGAATTCAACTCAAAGTAAAATAGACGAAGAAAAATCTTGGAATTCAAGAACGATTACTGATTACTAGAATTTTTTTGTTAGAATCCAAAAGTTCTTTACTAACT |
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| CDS seq | GGAGATTACACAATTCAAACAATTAGGAATTCAACTCAAAGTAAAATAGACGAAGAAAAATCTTGGAATTCAAGAACGATTACTGAT |
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| Protein seq | GDYTIQTIRNSTQSKIDEEKSWNSRTITD |
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| Function | NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [UniProtKB/Swiss-Prot:P0C386] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_02g0015341 | OsARC_02g0015341.01 | Chr02 | 14297120 | 14297249 | + | IsoSeq | ||
| CDS seq | GGAGATTACACAATTCAAACAATTAGGAATTCAACTCAAAGTAAAATAGACGAAGAAAAATCTTGGAATTCAAGAACGATTACTGAT |
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| Protein seq | GDYTIQTIRNSTQSKIDEEKSWNSRTITD |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.758622 | 0.000000 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g21398 | RBH | 43.116673 | 36.987282 | 7.396338 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0005620 | RBH | 43.970116 | 25.336077 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0006470 | RBH | 12.108517 | 0.843580 | 7.547076 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
