Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_01g0037950 | OGI:01105440 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr01:35575970-35581379 | ||||||||
| Gene Symbol | CIPK11, OsCIPK11, OsMSURPK2, MSURPK2, OsSnRK3.7, SnRK3.7, - | ||||||||||
| DNA seq | ACCGCGACAGCTAGACGGCCGCGCACTACCTGCCTGCCTCCTAGTAGTGGGGGAGCGCGCGGCGCGCCGTCGTATAACCTCGCGCTGAGAGCGGAGCGGAATCGGAAGATCCCGAGGGGTCAAGCCACAAAAGTTCGGCGCCAACCGTGAGGAAGAAATCTGAGAGCGCCGGGCAGGCGGAGCAGCATAAACTAGAACGGAGGAAGCTCCCGCGGCGGAGAGGAAGCGGCGTCCATTTGCTGTCCGCGAGGTCGTGCCTGATCGGTTCAGATGGGTTCGTCTGCGGTTCGCTGCCCGTCTTCGTCCAGTTCCTGATCAGGTATGGTCCTTCTCCCCCCCGAAGAGATCTGCTTGTCGTCAGATTTCGATTCCACTGCGACTGGGTGGAATTTGTGCGATTTAGTGTTTCCTATTGAGTGTAGGCAACTGATGATCTGTCAGAACGTAGTCTCTGTTAACATCAAGTAGGAATTCGCCACTACTTTTATTTTTCAGAATCCAAATGGGGACATTTCGTCGCAATCCAATCGTTCAACGTGTACTTTGATCGCCGATATGTGCTTCCCGCATTTTTAGGTTGATTGACAGCATTAGGGCATCCGTCCGATAGTCTGTCTGGGTTGGTGCTGAAGTCATATAATGAAATTGGGGGTGACATACCTGTGATGTTTGCCGGTGGCTCTTATAACAGTACTAAATTACCGTGTAGCATTTGAGATTTTAACATCCATTTGGATTTGGATTACATTTCCTGTGTAGGTGTACTAAAATTCAGTTTGTTCTTTCTAATGACAGCTCTTAACAGGTAGAGGACTTGGGAATGCAGAAAGATGTGCTTGCACGACAGGAAGTTAATATTTCGTGCAAACAAGATCCCAGCTTGGATCAAGCCGATGTTGCTGGACCTTCATGTGAATGTGCTGCATAGTGATACCGTGCTGCTTTTCCGTGTTTTGAAGCATAGTAGATTGAAGGACTCCAAGTTTGTTGATCATCACATTGACGACGACGGATAACATCTGCTGCATTCATTACCTATACTTTGTAGATACTTCTATAGAAGTGGTGTGGTGGTGTTTGCTCATTTTGTTGTGTTCCAATAACTTGATATGATGGATGGGAGGTCAATCTTGATGGGCCGTTATGAGGTTGGGAAGCAATTAGGACAAGGAACATTTGCAAAGGTGTATTATGCACGAAATCTTACTACCGGCCAAGCTGTTGCCATAAAGATGATCAACAAGGATAAGGTCATGAAAGTTGGGCTAATGGAGCAAATAAAGAGGGAGATTTCAATTATGAGATTGGTGAAACATCCAAATGTTCTTCAGTTATTTGAGGTTATGGCTAGCAAGAGCAAGATTTATTTTGTTCTGGAGTATGCTAAAGGTGGTGAGCTTTTCAACAAAATTGCTAAGGAGGGAAAGCTCAGTGAGGATTCTGCGAGGAGATATTTCCACCAATTGATCAATGCAGTTGACTATTGCCATAGTCGAGGTGTTTATCATCGTGACTTAAAGCCTGAAAATCTGCTCCTGGATGAGAATGAAAACCTTAAAGTCTCAGATTTTGGTTTAAGTGCCCTGGCTGAGTCCAAGAGGCAAGATGGTCTCCTGCATACTACATGTGGAACTCCAGCTTATGTTGCTCCTGAAGTTCTTAGCAGGAAAGGCTATGATGGTGCAAAGGCAGATGTATGGTCTTGTGGAGTAATTTTGTTTGTGCTTGTGGCTGGTTACCTTCCTTTCCATGATCCAAATTTGATAGAGATGTACAGAAAGATTTGCAGAGCAGACTTCAGATGCCCTCGTTACTTTTCTGCTGAGCTGAAGGATCTTATACATAAAATCCTTGATTCAGATCCAAGTACTAGGATTTCTATCCCAAGGATAAAGAGAAGTACTTGGTACAGAAAACCAGTTGAAATAAATGCTAAAAACAGTGAGGCAGCCACAACAAACAGCATCTCTTCAGGTGTAGCTACAACCTCAGGTTCTGCAGAGTGCAGCACTTCTGAGGAAAATCAAGGGTCCTTAAGCCTCCCAAACCTGAATGCATTTGACATAATTTCTCTCTCAACAGGGTTTAATCTATCTGGGTTTTTTGAGGATACGCATGGTCACCAGGAAGAACGGTTTACCACTAGGCAGCCTGTGACAACAGTACTTGGAAAGCTGAAGGAATTGGCCAAACGCCTGAAACTAAAAGTTAAGAAGAAGGATAATGGAGTTTTGAGATTGGCAGCACCAAAGGAAGGAAAGAAGGGCTTTCTTGAACTTGATGCAGAGATTTTTGAGGTCACCCCTTCATTCCTCTTAGTTGAGTTGAAAAAGACCAACGGGGATACTATGGAGTATCGAAAGCTGGTCAAAGAAGATATAAGGCCAGCACTCAAGGATATTGTTTGGGTGTGGCAAGGTGATGAGCACCTGAACTCACAATCTATCCTGCAAGGAGAGCAGCAGCAGTCCCCATTGCCACCAGAGCTACCACAGGATCAGTTGCAACCATCATTGCCACAACAGGAGAAGCAGGACATGCCTGAACCACCGTTGTTGCCACAAGTACCACAAGAAGAAGTGCAAACATCTATCCCCGCAGAACAAACAAAGAATTAGTTTTAACAGCCAACTGGTAATTCAAATGTTCTTGTCATCCATGTTTGTATCCTTCTTTTATGTCTTTGCTGCTTGTTTCTAATTCCTCTGGAATTGCAAAGCTGTACCTGTTTGTACAGAAGTGCAATGCACTTCAATTTTGGAAACTACAAAGGAACACCTCCGAGTGTTACTCCTGAATTTTCGAAAGAGAAACAATCATTGATGAGAAGTATTGAACCGTAGAAGTTTTTGGTGATGGGGACGTCTTTGGATTTTTCCCTCTTCACTGTGAACAGTTTTGGAATTTTGGTCTTTGGTTTTAATGAGCGTATTTTAGGTTTGTTGAAAATTTTGTTGACTGGTCCCTTTATTTCTTCCTTGGATAGCCGTCTACTCGCTTATGTCTGTCATGGACTGTTTTCAATAAGAAATCAATTCAACATTTTTGCAAGTGAATCCACATAACTAGCTTTCTTTCTTATTCTAGGTGGCTGTTCTTTGCAAAGGAGAATCGACATTATATTATTTCTATACGTAGAAGTGATTATAAATCCGAGGAAGAAAACATACTAGTAGGTTTTACTGAAAATATCCATGCTTTTTGATTGTTTGAGAAAATCTCATGTGGTTTTTTAAGAGGTTCTGAACATCATACATTCGCAGTTTTTTTATGTAGCAGAAACCTTTATTACCTCATGAAGAAATCTCTACAATGGTCAGAATTTCAAATACATTTTCTATTTAGCATCTAGATTTCCATCATCTATGTGAAGCAGGTCAACGCCTCAACGGGGAATCACAATGACCATTGGTTGGTCCATTGGTTGATGATGAAACCTTTCAGGTTTCCTGTGAGCTTTCGGAGAAGACCCTGCTCAAGTCTCCCCACAACAGACTAGCATTGTAGTCAACGGGGATCCCAACTCTTAGAAAAGCTCCGGTAAGCCATTACACAAGATCATTTTAGTGCACCCATAGACCCACTCTCTCCTTGCTGGCATCGACGGGCGCAGAAGAACTGATTCGATCTATATTTGCAACATGAGCGGGGAAGTCGAATTAGGACAGCCGTTGCGGGTAATTACCTTGACCTCTCTTTTAAGTTCCATTCTTGTTGCTCCAGTAAGGAATGCCTAGGCTACGGACAATTTAGAGACTAGATTTCCTATAACAATGGATATTGCTAATCAGTATGTTGTGAGGTACAATTTCCATTACAGCATATCAATTTCACCATGTAAATGCCATGTTTTTTCTTTGACTTCCCCTGTTGTTCTTAATTTGGTGGGGAATAAGACTGAGCCGTTGTATGTAAGGATTATGAATCCCTAATTGTTGGCATCTCCTGTCGATTTCTTGCACTGTCCGCAGTTGCGCATCGTCTCAACTCGCTAGTCTAATGCCTTGCTGAAGTTGGTTGAAGACTTGAATGGATTGCCCTTTGTTGATGTGCTGACTTTCCATGCATTTCCGTACTGTTTGCAGCCCCCAGATTCTGTACCAAGTACAGGAAGAGACGAGGAAGAAGGGTCGTCGCACCATGGAAATGGCTCAGGCGCAGCCAGAGAGAACCCAGAGAACCCATTGCCGGACCTGGCGCTGGCGAAATCCGAGTCAGACCGGATAAAAGCCTTTTACCAGACGGTCCTCTCGGCCATTGTCGTGTTCATCGTGGCGGCGCTGTCAGGATACAAGGACATGAAGCCGCTCTACTCGACCACAAATCACAAGAAAGTTCACCTCAGCAACCTCCTTGTCATCGAGGGGTTCTGCATGATTGCTACCTTCATATGCGCGGCTGTTTTGATGATGTACGAGTTCTACACGTACCACCATGAGATCGCCCGCGAGGTCGTCGCAGGTGCAGGGACCTCACCGTCCTCATCGCGGTCGCCGGAGCGATGCTGGTTGCGACGGACACGATCCTCGTCGTCATCGCCAACAGGGACAACGCGGTGTTCGCCGTTCTTTTCGTGCCGGTGCTGCTGTTAGTCGGCATGGCTGTGTACACCGGAGCATCGATGGAGGAGCAGCCGCCGAACTCGCCGCACGACGGCGGGTACGATGAGGCAACCAAAAGCACCTTTGATCTGGCCACCGTTAGTACAATGGCTGCATTGGGTTTGCAGGGGACCATCGTCTTCGGCTACCTGAAAACGCCCGAGAAGAAGAGCGAACATGATGACCCTCCACTGGACCTCGCCGTCTGCTACATCGCCTCGACGGTCTGCCTGACCGTCATGGCGGTTTGCGCCATCCGCTGGCTCTTCTCCCCGAAGAAAAGCGGAAGGCTCTGGTCGGAATCATCGGCAGCCTCAGGCACGTCCTGCTCGCCTCTCTGGCGCTGATGGCGGTGGTTGTCTCCGTCGAGTTCTTGGACGGCTTCGTCGTGCTCTCCGTCTGGCCGGAGGCCGTCGCTCTGGTGCTGTACTACGCGGCACAGCTCTGCTCGGGGCGGCAGCCCGGGGGAGGAGTCGGGAGCCGGCCATGGATCGAATTTGTCTTCCGGATTGTCGCCACCGCCGGGTTCACGCTCATGGCCGGGCTGTACGCGGCGTTCCTCGGGACCAACCACTACAGCGTGTACCTCAAGGCCGCCATGCTCGTGCTCCTGATGGCAGTTCTCTCGAGCCTCAGCCGTCTGGCGAACCCGGTTTACATGCCCGAGATCGACGGAGCTCTCCTTGAGTTCTGCGTCGCCGGCGTGGCGCTCGCCTTCCCCGCCGTGTCGCTTCTGGTTGCTTGTCCCTTGGTGCTTAAGGTCTTCGTTGACCTATATATTCATCATAGTTCTCTTTGAACCAAGGAGG
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| CDS seq | ATGGGCCGTTATGAGGTTGGGAAGCAATTAGGACAAGGAACATTTGCAAAGGTGTATTATGCACGAAATCTTACTACCGGCCAAGCTGTTGCCATAAAGATGATCAACAAGGATAAGGTCATGAAAGTTGGGCTAATGGAGCAAATAAAGAGGGAGATTTCAATTATGAGATTGGTGAAACATCCAAATGTTCTTCAGTTATTTGAGGTTATGGCTAGCAAGAGCAAGATTTATTTTGTTCTGGAGTATGCTAAAGGTGGTGAGCTTTTCAACAAAATTGCTAAGGAGGGAAAGCTCAGTGAGGATTCTGCGAGGAGATATTTCCACCAATTGATCAATGCAGTTGACTATTGCCATAGTCGAGGTGTTTATCATCGTGACTTAAAGCCTGAAAATCTGCTCCTGGATGAGAATGAAAACCTTAAAGTCTCAGATTTTGGTTTAAGTGCCCTGGCTGAGTCCAAGAGGCAAGATGGTCTCCTGCATACTACATGTGGAACTCCAGCTTATGTTGCTCCTGAAGTTCTTAGCAGGAAAGGCTATGATGGTGCAAAGGCAGATGTATGGTCTTGTGGAGTAATTTTGTTTGTGCTTGTGGCTGGTTACCTTCCTTTCCATGATCCAAATTTGATAGAGATGTACAGAAAGATTTGCAGAGCAGACTTCAGATGCCCTCGTTACTTTTCTGCTGAGCTGAAGGATCTTATACATAAAATCCTTGATTCAGATCCAAGTACTAGGATTTCTATCCCAAGGATAAAGAGAAGTACTTGGTACAGAAAACCAGTTGAAATAAATGCTAAAAACAGTGAGGCAGCCACAACAAACAGCATCTCTTCAGGTGTAGCTACAACCTCAGGTTCTGCAGAGTGCAGCACTTCTGAGGAAAATCAAGGGTCCTTAAGCCTCCCAAACCTGAATGCATTTGACATAATTTCTCTCTCAACAGGGTTTAATCTATCTGGGTTTTTTGAGGATACGCATGGTCACCAGGAAGAACGGTTTACCACTAGGCAGCCTGTGACAACAGTACTTGGAAAGCTGAAGGAATTGGCCAAACGCCTGAAACTAAAAGTTAAGAAGAAGGATAATGGAGTTTTGAGATTGGCAGCACCAAAGGAAGGAAAGAAGGGCTTTCTTGAACTTGATGCAGAGATTTTTGAGGTCACCCCTTCATTCCTCTTAGTTGAGTTGAAAAAGACCAACGGGGATACTATGGAGTATCGAAAGCTGGTCAAAGAAGATATAAGGCCAGCACTCAAGGATATTGTTTGGGTGTGGCAAGGTGATGAGCACCTGAACTCACAATCTATCCTGCAAGGAGAGCAGCAGCAGTCCCCATTGCCACCAGAGCTACCACAGGATCAGTTGCAACCATCATTGCCACAACAGGAGAAGCAGGACATGCCTGAACCACCGTTGTTGCCACAAGTCAACGCCTCAACGGGGAATCACAATGACCATTGGTTGGTCCATTGGTTGATGATGAAACCTTTCAGGTTTCCTCCCCCAGATTCTGTACCAAGTACAGGAAGAGACGAGGAAGAAGGGTCGTCGCACCATGGAAATGGCTCAGGCGCAGCCAGAGAGAACCCAGAGAACCCATTGCCGGACCTGGCGCTGGCGAAATCCGAGTCAGACCGGATAAAAGCCTTTTACCAGACGGTCCTCTCGGCCATTGTCGTGTTCATCGTGGCGGCGCTGTCAGGATACAAGGACATGAAGCCGCTCTACTCGACCACAAATCACAAGAAAGTTCACCTCAGCAACCTCCTTGTCATCGAGGGGTGCAGGGACCTCACCGTCCTCATCGCGGTCGCCGGAGCGATGCTGGTTGCGACGGACACGATCCTCGTCGTCATCGCCAACAGGGACAACGCGGTGTTCGCCGTTCTTTTCGTGCCGGTGCTGCTGTTAGTCGGCATGGCTGTGTACACCGGAGCATCGATGGAGGAGCAGCCGCCGAACTCGCCGCACGACGGCGGGTACGATGAGGCAACCAAAAGCACCTTTGATCTGGCCACCGTTAGTACAATGGCTGCATTGGGTTTGCAGGGGACCATCGTCTTCGGCTACCTGAAAACGCCCGAGAAGAAGAGCGAACATGATGACCCTCCACTGGACCTCGCCGTCTGCTACATCGCCTCGACGCGGAAGGCTCTGGTCGGAATCATCGGCAGCCTCAGGCACGTCCTGCTCGCCTCTCTGGCGCTGATGGCGGTGGTTGTCTCCGTCGAGTTCTTGGACGGCTTCGTCGTGCTCTCCGTCTGGCCGGAGGCCGTCGCTCTGGTGCTGTACTACGCGGCACAGCTCTGCTCGGGGCGGCAGCCCGGGGGAGGAGTCGGGAGCCGGCCATGGATCGAATTTGTCTTCCGGATTGTCGCCACCGCCGGGTTCACGCTCATGGCCGGGCTGTACGCGGCGTTCCTCGGGACCAACCACTACAGCGTGTACCTCAAGGCCGCCATGCTCGTGCTCCTGATGGCAGTTCTCTCGAGCCTCAGCCGTCTGGCGAACCCGGTTTACATGCCCGAGATCGACGGAGCTCTCCTTGAGTTCTGCGTCGCCGGCGTGGCGCTCGCCTTCCCCGCCGTGTCGCTTCTGGTTGCTTGTCCCTTGGTGCTTAAGGTCTTCGTTGACCTATATATTCATCATAGTTCTCTTTGA
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| Protein seq | MGRYEVGKQLGQGTFAKVYYARNLTTGQAVAIKMINKDKVMKVGLMEQIKREISIMRLVKHPNVLQLFEVMASKSKIYFVLEYAKGGELFNKIAKEGKLSEDSARRYFHQLINAVDYCHSRGVYHRDLKPENLLLDENENLKVSDFGLSALAESKRQDGLLHTTCGTPAYVAPEVLSRKGYDGAKADVWSCGVILFVLVAGYLPFHDPNLIEMYRKICRADFRCPRYFSAELKDLIHKILDSDPSTRISIPRIKRSTWYRKPVEINAKNSEAATTNSISSGVATTSGSAECSTSEENQGSLSLPNLNAFDIISLSTGFNLSGFFEDTHGHQEERFTTRQPVTTVLGKLKELAKRLKLKVKKKDNGVLRLAAPKEGKKGFLELDAEIFEVTPSFLLVELKKTNGDTMEYRKLVKEDIRPALKDIVWVWQGDEHLNSQSILQGEQQQSPLPPELPQDQLQPSLPQQEKQDMPEPPLLPQVNASTGNHNDHWLVHWLMMKPFRFPPPDSVPSTGRDEEEGSSHHGNGSGAARENPENPLPDLALAKSESDRIKAFYQTVLSAIVVFIVAALSGYKDMKPLYSTTNHKKVHLSNLLVIEGCRDLTVLIAVAGAMLVATDTILVVIANRDNAVFAVLFVPVLLLVGMAVYTGASMEEQPPNSPHDGGYDEATKSTFDLATVSTMAALGLQGTIVFGYLKTPEKKSEHDDPPLDLAVCYIASTRKALVGIIGSLRHVLLASLALMAVVVSVEFLDGFVVLSVWPEAVALVLYYAAQLCSGRQPGGGVGSRPWIEFVFRIVATAGFTLMAGLYAAFLGTNHYSVYLKAAMLVLLMAVLSSLSRLANPVYMPEIDGALLEFCVAGVALAFPAVSLLVACPLVLKVFVDLYIHHSSL |
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| Function | CBL-interacting protein kinase 11 [UniProtKB/Swiss-Prot:Q0JI49] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_01g0037950 | OsARC_01g0037950.01 | Chr01 | 35577103 | 35581379 | + | NAM | ||
| CDS seq | ATGGGCCGTTATGAGGTTGGGAAGCAATTAGGACAAGGAACATTTGCAAAGGTGTATTATGCACGAAATCTTACTACCGGCCAAGCTGTTGCCATAAAGATGATCAACAAGGATAAGGTCATGAAAGTTGGGCTAATGGAGCAAATAAAGAGGGAGATTTCAATTATGAGATTGGTGAAACATCCAAATGTTCTTCAGTTATTTGAGGTTATGGCTAGCAAGAGCAAGATTTATTTTGTTCTGGAGTATGCTAAAGGTGGTGAGCTTTTCAACAAAATTGCTAAGGAGGGAAAGCTCAGTGAGGATTCTGCGAGGAGATATTTCCACCAATTGATCAATGCAGTTGACTATTGCCATAGTCGAGGTGTTTATCATCGTGACTTAAAGCCTGAAAATCTGCTCCTGGATGAGAATGAAAACCTTAAAGTCTCAGATTTTGGTTTAAGTGCCCTGGCTGAGTCCAAGAGGCAAGATGGTCTCCTGCATACTACATGTGGAACTCCAGCTTATGTTGCTCCTGAAGTTCTTAGCAGGAAAGGCTATGATGGTGCAAAGGCAGATGTATGGTCTTGTGGAGTAATTTTGTTTGTGCTTGTGGCTGGTTACCTTCCTTTCCATGATCCAAATTTGATAGAGATGTACAGAAAGATTTGCAGAGCAGACTTCAGATGCCCTCGTTACTTTTCTGCTGAGCTGAAGGATCTTATACATAAAATCCTTGATTCAGATCCAAGTACTAGGATTTCTATCCCAAGGATAAAGAGAAGTACTTGGTACAGAAAACCAGTTGAAATAAATGCTAAAAACAGTGAGGCAGCCACAACAAACAGCATCTCTTCAGGTGTAGCTACAACCTCAGGTTCTGCAGAGTGCAGCACTTCTGAGGAAAATCAAGGGTCCTTAAGCCTCCCAAACCTGAATGCATTTGACATAATTTCTCTCTCAACAGGGTTTAATCTATCTGGGTTTTTTGAGGATACGCATGGTCACCAGGAAGAACGGTTTACCACTAGGCAGCCTGTGACAACAGTACTTGGAAAGCTGAAGGAATTGGCCAAACGCCTGAAACTAAAAGTTAAGAAGAAGGATAATGGAGTTTTGAGATTGGCAGCACCAAAGGAAGGAAAGAAGGGCTTTCTTGAACTTGATGCAGAGATTTTTGAGGTCACCCCTTCATTCCTCTTAGTTGAGTTGAAAAAGACCAACGGGGATACTATGGAGTATCGAAAGCTGGTCAAAGAAGATATAAGGCCAGCACTCAAGGATATTGTTTGGGTGTGGCAAGGTGATGAGCACCTGAACTCACAATCTATCCTGCAAGGAGAGCAGCAGCAGTCCCCATTGCCACCAGAGCTACCACAGGATCAGTTGCAACCATCATTGCCACAACAGGAGAAGCAGGACATGCCTGAACCACCGTTGTTGCCACAAGTCAACGCCTCAACGGGGAATCACAATGACCATTGGTTGGTCCATTGGTTGATGATGAAACCTTTCAGGTTTCCTCCCCCAGATTCTGTACCAAGTACAGGAAGAGACGAGGAAGAAGGGTCGTCGCACCATGGAAATGGCTCAGGCGCAGCCAGAGAGAACCCAGAGAACCCATTGCCGGACCTGGCGCTGGCGAAATCCGAGTCAGACCGGATAAAAGCCTTTTACCAGACGGTCCTCTCGGCCATTGTCGTGTTCATCGTGGCGGCGCTGTCAGGATACAAGGACATGAAGCCGCTCTACTCGACCACAAATCACAAGAAAGTTCACCTCAGCAACCTCCTTGTCATCGAGGGGTGCAGGGACCTCACCGTCCTCATCGCGGTCGCCGGAGCGATGCTGGTTGCGACGGACACGATCCTCGTCGTCATCGCCAACAGGGACAACGCGGTGTTCGCCGTTCTTTTCGTGCCGGTGCTGCTGTTAGTCGGCATGGCTGTGTACACCGGAGCATCGATGGAGGAGCAGCCGCCGAACTCGCCGCACGACGGCGGGTACGATGAGGCAACCAAAAGCACCTTTGATCTGGCCACCGTTAGTACAATGGCTGCATTGGGTTTGCAGGGGACCATCGTCTTCGGCTACCTGAAAACGCCCGAGAAGAAGAGCGAACATGATGACCCTCCACTGGACCTCGCCGTCTGCTACATCGCCTCGACGCGGAAGGCTCTGGTCGGAATCATCGGCAGCCTCAGGCACGTCCTGCTCGCCTCTCTGGCGCTGATGGCGGTGGTTGTCTCCGTCGAGTTCTTGGACGGCTTCGTCGTGCTCTCCGTCTGGCCGGAGGCCGTCGCTCTGGTGCTGTACTACGCGGCACAGCTCTGCTCGGGGCGGCAGCCCGGGGGAGGAGTCGGGAGCCGGCCATGGATCGAATTTGTCTTCCGGATTGTCGCCACCGCCGGGTTCACGCTCATGGCCGGGCTGTACGCGGCGTTCCTCGGGACCAACCACTACAGCGTGTACCTCAAGGCCGCCATGCTCGTGCTCCTGATGGCAGTTCTCTCGAGCCTCAGCCGTCTGGCGAACCCGGTTTACATGCCCGAGATCGACGGAGCTCTCCTTGAGTTCTGCGTCGCCGGCGTGGCGCTCGCCTTCCCCGCCGTGTCGCTTCTGGTTGCTTGTCCCTTGGTGCTTAAGGTCTTCGTTGACCTATATATTCATCATAGTTCTCTTTGA
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| Protein seq | MGRYEVGKQLGQGTFAKVYYARNLTTGQAVAIKMINKDKVMKVGLMEQIKREISIMRLVKHPNVLQLFEVMASKSKIYFVLEYAKGGELFNKIAKEGKLSEDSARRYFHQLINAVDYCHSRGVYHRDLKPENLLLDENENLKVSDFGLSALAESKRQDGLLHTTCGTPAYVAPEVLSRKGYDGAKADVWSCGVILFVLVAGYLPFHDPNLIEMYRKICRADFRCPRYFSAELKDLIHKILDSDPSTRISIPRIKRSTWYRKPVEINAKNSEAATTNSISSGVATTSGSAECSTSEENQGSLSLPNLNAFDIISLSTGFNLSGFFEDTHGHQEERFTTRQPVTTVLGKLKELAKRLKLKVKKKDNGVLRLAAPKEGKKGFLELDAEIFEVTPSFLLVELKKTNGDTMEYRKLVKEDIRPALKDIVWVWQGDEHLNSQSILQGEQQQSPLPPELPQDQLQPSLPQQEKQDMPEPPLLPQVNASTGNHNDHWLVHWLMMKPFRFPPPDSVPSTGRDEEEGSSHHGNGSGAARENPENPLPDLALAKSESDRIKAFYQTVLSAIVVFIVAALSGYKDMKPLYSTTNHKKVHLSNLLVIEGCRDLTVLIAVAGAMLVATDTILVVIANRDNAVFAVLFVPVLLLVGMAVYTGASMEEQPPNSPHDGGYDEATKSTFDLATVSTMAALGLQGTIVFGYLKTPEKKSEHDDPPLDLAVCYIASTRKALVGIIGSLRHVLLASLALMAVVVSVEFLDGFVVLSVWPEAVALVLYYAAQLCSGRQPGGGVGSRPWIEFVFRIVATAGFTLMAGLYAAFLGTNHYSVYLKAAMLVLLMAVLSSLSRLANPVYMPEIDGALLEFCVAGVALAFPAVSLLVACPLVLKVFVDLYIHHSSL
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_01g0037950 | OsARC_01g0037950.02 | Chr01 | 35575970 | 35578795 | + | IsoSeq | ||
| CDS seq | ACCGCGACAGCTAGACGGCCGCGCACTACCTGCCTGCCTCCTAGTAGTGGGGGAGCGCGCGGCGCGCCGTCGTATAACCTCGCGCTGAGAGCGGAGCGGAATCGGAAGATCCCGAGGGGTCAAGCCACAAAAGTTCGGCGCCAA |
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| Protein seq | TATARRPRTTCLPPSSGGARGAPSYNLALRAERNRKIPRGQATKVRRQ |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.026639 | 0.200722 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0824600 | RBH | 0.804605 | 0.855721 | 4.589257 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g60910 | RBH | 0.533031 | 0.568850 | 1.156385 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0824600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0038600 | RBH | 0.588644 | 11.233960 | 1.913005 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0038090 | RBH | 0.159982 | 2.096066 | 0.873795 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0038500 | RBH | 0.0 | 7.930498 | 4.249253 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0020600 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0037580 | RBH | 12.042986 | 4.328993 | 6.903112 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0582800 | RBH | 2.3120555 | 3.1474785 | 5.707858 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0037280 | RBH | 0.104839 | 0.409379 | 1.157125 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0579000 | RBH | 7.469484 | 2.897213 | 13.8484005 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0037510 | RBH | 0.189340 | 0.039605 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0037540 | RBH | 1.327389 | 18.806463 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0037770 | RBH | 3.474531 | 4.218879 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0037790 | RBH | 0.211221 | 0.551794 | 0.792159 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0037620 | RBH | 0.049817 | 4.058860 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G038120 | RBH | 0.180273 | 1.181057 | 1.335590 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0037800 | RBH | 0.177530 | 3.134089 | 2.950346 |
