Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os12g0565100 | OGI:12060360 | 3/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr12:23182563-23188498 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GCGAGGGAGTTTAACGCAAAACTTGTTTTGCAGAGTATCCAGAGTAGACTCGAGAAAAGTCGTCGTTCGCCATTCCCATCCGCCGCCAAGGCTCCAAACCTCCCTTCCCCTCCGCAGCTCCGCCTTACGACGCCATGGCCGTCGCCTCGCTGTCGCCGCCGCCGGATTGAGGGCGCCGCCATCAGCCGGCCGCGTCGCTGCTCTTCGCGTGCTCCTCGCAACGGGGGGCGGCGGGGTCCGTCCAACTGCCGCTCCTACCACCTCTTCATCAGCAGCAGCAACGCCCGCTTTCTCCGCCACCGGCAGCCGAGGCGCCGCCTCCTCCGCCCACATCGCAGCGTTGACTTCTCCAGGTTGGCTCGCCAACTCCATCGGCTGTAGACTTCCAGCCTTCCAGGTCATCCACCATCTCACCCCCTCTCAATGGCAAAGCTACTATCCCCTGCTCATGATGCACTCTGCCTGTTCGTTGTAATGTTTATTAGTGGAAAATAGCTCAGCAACGCCATCTGTCAACGATTAATAATCCATGTTGTTTGCCCTGTGACCACTGAAAGTTTAATAGTGCTTATTAATATTTTGGCATGCGAATGCTCCTAACAGACCAAAATGTAGTCTCTGTCAGTTTCTTGGGTTTCTTTGTAACCATCTGAATTTAAACCAGTAAATTACCTATCTGTTGTATGTAAGGAATGGATTTCAGAAGTTTAAAATAGCAAATGGGGCTATCTCATGATAACCTTAAGTGGTGAGATGAGGTTGGGGGTACAATTCAGATCAAGAGTTTTACTGATCTGTACCAATTATCATGTACAATTTTAAAATGACATAATTAAAAATTTTATAGAAATGAACTGCGAAAACATATATGGTGATTAGATACTTGGATGAATGAGAGATAGTAGTATAATGTTGACTAATTTCTTAAGTACCATTACCATCTTGTGGGAGATCATGGTCCTTGAGGCCATTTTAATTGTTGGGATGACCGAAGGAGGTCATCCAATGTCATTAAGATAGAGGAAAAAAAAGTTACAAGAAAGTTTTTCATCGACAGCAAGCTATCGAGGAAGGATGTGCACAAAGCGCACGCCCCGACACCACATGCCAACCGCACAAACACAAGCTACAGAGAGGGGAGCCAAACATCGAACCGGCAACCGCTATGCGAGGCCGGTCGCCGCTATGCTTACAACAACACCACAGAACGGAAACTCAAAAAAGACAACGCCTTCATGAAGGTAGCGACATCAAAAGATGCCGCCGTTGTCCGTCCAAAAGACTGGACAAGGTTTTCACCTAGAGATCCTCGTCGAGGGAGGAGTGTACCTCGACAACGCCCCCCAGAGGGTTACCGCGCCAGAAGGCGTAGCCGCTGCCGGTCCAGCGAAACACTGGGCTAGGCTTTCGCCTGGGACTCTCTACCCCCGTCGCCGTGGTCCGTTGCCCGCCAACTCTGATACCACCAGCTTAACATCGGTAGCACGTGACCTCCACCACACCGGACCGGCGCTTGAGGCCATTTTAATACCATTAGATGATTCATCATCTCATGTTCCTCACTCAACACACATGATAGAGTATATGCTAATTTCATATCCATCTAGCCTCCCTCCGAAGCTGCAGATCACATGACAGAGTGACCACAATATATATACAGTAGTAACATATAAGGTGAATTGTGGAAAGTGAACTCCACAGGGAAACAAAGCTGCATATGCCAATCTCCCTAAATAGGCACCAGTCCACCAGATTCTGCTAATTGTGCTTTCTGTTTTATCACCTTTCTTGGGAAAAAGCATGTCCCTCTTCTGGTCATTACTAAGAGGATAACTTAACAGCAGACATATCTCCTGAGTGCAGCTGTCCTTAAACCAAATCTTAGTTCATCTTCTTTCCTGAAGGCTAAATTCTGCAATCATTTCCAATGGTCTAGTGGTAGATACAAAGGTTATTTATGAATGCTTTTGTTATTTTATACTCTTGATGGTAAAATGTGTAATTGTGGATGTCCATTATTATCTAGCTCTTATTGTGGTAATGCATACGATTCCTGTACCATGCTTTCTTTTAATCATGCTGATGTTTAGTTCTATGAAATTGGAAACGTTGCTGAGGCAGTCAAAACTTTCCAACAGATGGCAAGTGCCTTGACGGGAGTGATGACATCCGTCATCAACAAGCTCACTGCTCTTCTTGGGAAGGAGTACATGAAGTTGAAAGGAGTACAGGGGGAGGTGGAGTTTATGATAGATGAGCTGAGCAGCATGAATGCTCTCCTTCATAGGCTGGCGGAGGAGGACCAACACCTTGATGTGCAAACGAAGGAGTGGCGTAACCAAGTGCGCGAAATGTATTATGACATTGAGGACTGTATCGATGACTTCATGCATCACCTTGGCCATACTGACATTGCTGAGTCTGCAGGGCTTGTCCATAGGATGGCCCAACACCTTAAGACTCTGAGGGTGCGCCACCAAATTGCCAACCAAATCGAGAAGCTCAAAGCACGCGTTGAAGATGCAAGCAAGCGGCGATTGAGGTATAAGCTTGATGAGCGCACCTTCAATCTTAGTACTGCAGGGGCCATTGACCCCCGGTTACCTTCTCTATATGCTGAGTCAGACGGGCTTGTTGGAATTGAACAACCAAGGGATGTGGTTATCAAGTTGCTAACGGAGGGAGAGGGTGCATCATCGCAGAAGCTAAAGGTGATATCCATTGTGGGTCCTGGAGGTCTAGGTAAAACTACACTTGCGAATGAGGTGTTTCGCAAACTAGAGAGCCAGTTCCAGTGTCGAGCTTTTGTTTCTCTGTCACAGCAGCCTGATGTGAAGAAGATTGTAAGAAACATATACTGTCAAGTCAGCCAGCAGGAGTATGGTAACATAGATATATGGGATGAGGAAAAGCTGATAAACGCAACCCGAGAATTCCTAACGAACAAGAGGTATGCTCATTACTTAGTTTCAAAGATATCTTCGCTGTAGGTCATGCATCACCTTTTGACCAACATTCACAATATCTGCTAAAATACAAATATGCATGTTTTTAGATAACACAGATATTTATGTTGATTATTTATCCAATTGATTGCTTTAAGTTAAATGTATAAGGATGCCGTTTGTGCTTCTAGAAAATGCACATTATCGGTATGTTTTCATGGGTAGTTTCTGTAGTTTTTATTCTCACTATTGTACAGAATGCAGCTCTCCTGCATTCTTTTCAAGAAAACAAAATGCGCAAATTCTAAACATAAGTACTACCCCCGTCCTAAAATATCGCAACTTTTTGGCTATGAATCTGGACAAGTAACTAAAAGTTGCTATATTTTTGGGGCAGAGGTAGTATCTATTAGTAGTTCCATATTCCAATAATATTCCATTAGAAAGATTGGATCGACTGTGACAGGGTGACTCACTACAAAAGTTTCATATTGTCAGTTGTTTTAGTGGCCAAGCCATAGGTAATAATGACTATTTGTGTCAGCTGTTATATAGTGCAAGAAGTGCTTTTGTATCTCATGGAAAACGGTTGCAATGATCAGTTGCTTTCATCTCAATTTATATGGCCACTGTTTGTGGGCCATAAAATCAATTTCCTTTTTCTTGTTACTGTATGTATCTTTTTTTTTTTGCAAGAATAAAGTACATATCTATTACTTCCTAGTTTGAACTAGAAAGGTAGCTATATTTTGGGGCGGAGGGAGTATTTGTGGACCTTATGCCATTTTGATTTTTCTAACTCGTCCTACTTTATAAGAGGTCTAAAAGTATGAACTTGCATTGCACATAGGTACTTTGTCGTCATTGATGATATATGGAGTACTCAAGCATGGAAGACCATAAGATGTGCTTTATTTGTGAATAATTGTGGAAGCAGAATAATGACGACAACACGCAATATGGCAATAGCCAAGTCATGTTGCACTCCTGACCATGATCGTGTCTTTGAAATAATGCCTCTTAGTATAGATAACTCGAAGAGTTTGTTTTTGAAACGAATATTTGGCTCAAAGGATGTGTGCATTCCTCAATTGGATGAGGTTTGTTATGAAATATTGAAAAAATGTGGCGGGTCGCCATTGGCTATTATTACAATAGCTAGCTTATTGGCTAATAAAGCTAATACCAAGGAAGAATGGGAAAGGGTGCGTAATTCTATCGGTTCAACACTGCAAAAAGATCCTGATGTAGAAGAGATGAGAAGGATATTATCCTTGAGCTATGATGATCTTCCCCAACATTTGAAGACATGCTTACTGTATCTAAGCATATTTCCAGAAGATTATGAGATTGAGAGGGATCGACTAGTAGAGAGGTGGGTTGCTGAAGGATTCATTATTACAGAGGGGGGGCATGACTTGAAGGAAATAGGAGACTGTTATTTTAGTGATCTTATCAATAGAAGCATGATTGAACCGGTGAAAATCCAATACAATGGTCGAGTTTTTTCCTGCCGAGTCCATGATATGATTCTTGATCTCCTTACATGCAAGTCAACTGAAGAAAATTTTGCCACCTTCATGGGTGGCCAAAATCAGAAATTAGTGCTACAGGGTAAGGTTCGTCGGCTCTCTCTCAACTATTACACTCAAGATCACATCATGGTTCCATCAACAGCAATCATCACACATTGCCGATCTCTCAGTATTTTTGGGTATGCTGAACAGAAGCCTCCTCTTTCAATGTTTCCAGTTCTTCGTGTACTTGATATAGAAAATGGTGAAGATATGGAAAGCAGCTATACCAAACACATAAGGAAGCTGATTCAGTTGAAGTACCTGCGACTGAATGTAAGAAGCGTAGCTGAACTTCCTGAAAAACTTGGAGAGCTACAACATTTGCAGACTCTTGATCTCAGACGGACAAACATAAGAAAATTGCCAGAGAGCTTCGTTCGTCTGCAAAATTTGACATATTTGCGTGTCAATAATCTGGATTTGCCTGAAGGAATTGGACATCTGCATGCTCTGCAGGAGCTAACAGAGATCAGAATCAGCCAGGACTGCTTGGCATCTTCCTTGTTGGAGCTAAGAAATCTGACGAAGCACACATTGACTACAAAGTTTTCGCCGATAATTTAGTGTCATCGCTTCGCAAACTGGGCAGACTCAACCTTCGAATAATGTGCATCCTGGGTTATTATGCGTGTTCCATAGAGTTCTTGTTGGATTCATGGTTCCCCTCCCCTCATCTCCTCCAATCATTTGCGATGGGCATGAACTATCATTTCCCCAGAGTCCCATCCTGGATCGCATCACTTGACAACCTCACTTGCTTAGAAATCAACATAGACCTGGTGGATGAGAAAGTGATACAGATTCTTGGGGATTTACCTGTTCTGATATTTCTGTGGCTGATATCAAAAGAAGCAGGTCCCAATGAAAGGCTCGTCATAAGAAGTAACATGTTTGTATGCCTGAAGGAGTTCCACTTCACCTGCTGGAGAAATTGGGAAGGGCTGATGTTTGAAGCTGGGGCAATGGCAAAGGTTGAGATGCTGCGGGTTTCGTTCGACGCCGGTGGCAGTGTTCTTGATTTCGGCATCCAGCACCTGGCTTCCCTCAGGCATCTCATCGTCGAGATCGTCTGTGGCGGTGCGACGCTTCGGGAGGTGGAGGCACTGGAAGATGCCATTAGGCACTCAGCTGATCTCCTTCCATGCCACCCAGCAGTTGAAGTTCGAACTTGGGATGAAGAAAAGATGGTGAAGGAGGAGGTGCAAATCATGGCTGAAGAGAAGATCCAAACAAACAGCTAAAAAACCAGCATGACTTTGCTACCAGTGAAGGCAGCTGAGCAGTATTTTAAGGCCCCGTTTGGTACGGCTCCAAACTCCAACTCCCAGCTCCAAACTCCTACTCCAGTTGAAGCTAGCTCCTATTGGAGTTACAGACCGATCAAAAGTGTTTGGCAAACTTTTAGCTCCAGATC
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| CDS seq | ATGGCAAGTGCCTTGACGGGAGTGATGACATCCGTCATCAACAAGCTCACTGCTCTTCTTGGGAAGGAGTACATGAAGTTGAAAGGAGTACAGGGGGAGGTGGAGTTTATGATAGATGAGCTGAGCAGCATGAATGCTCTCCTTCATAGGCTGGCGGAGGAGGACCAACACCTTGATGTGCAAACGAAGGAGTGGCGTAACCAAGTGCGCGAAATGTATTATGACATTGAGGACTGTATCGATGACTTCATGCATCACCTTGGCCATACTGACATTGCTGAGTCTGCAGGGCTTGTCCATAGGATGGCCCAACACCTTAAGACTCTGAGGGTGCGCCACCAAATTGCCAACCAAATCGAGAAGCTCAAAGCACGCGTTGAAGATGCAAGCAAGCGGCGATTGAGGTATAAGCTTGATGAGCGCACCTTCAATCTTAGTACTGCAGGGGCCATTGACCCCCGGTTACCTTCTCTATATGCTGAGTCAGACGGGCTTGTTGGAATTGAACAACCAAGGGATGTGGTTATCAAGTTGCTAACGGAGGGAGAGGGTGCATCATCGCAGAAGCTAAAGGTGATATCCATTGTGGGTCCTGGAGGTCTAGGTAAAACTACACTTGCGAATGAGGTGTTTCGCAAACTAGAGAGCCAGTTCCAGTGTCGAGCTTTTGTTTCTCTGTCACAGCAGCCTGATGTGAAGAAGATTGTAAGAAACATATACTGTCAAGTCAGCCAGCAGGAGTATGGTAACATAGATATATGGGATGAGGAAAAGCTGATAAACGCAACCCGAGAATTCCTAACGAACAAGAGGTACTTTGTCGTCATTGATGATATATGGAGTACTCAAGCATGGAAGACCATAAGATGTGCTTTATTTGTGAATAATTGTGGAAGCAGAATAATGACGACAACACGCAATATGGCAATAGCCAAGTCATGTTGCACTCCTGACCATGATCGTGTCTTTGAAATAATGCCTCTTAGTATAGATAACTCGAAGAGTTTGTTTTTGAAACGAATATTTGGCTCAAAGGATGTGTGCATTCCTCAATTGGATGAGGTTTGTTATGAAATATTGAAAAAATGTGGCGGGTCGCCATTGGCTATTATTACAATAGCTAGCTTATTGGCTAATAAAGCTAATACCAAGGAAGAATGGGAAAGGGTGCGTAATTCTATCGGTTCAACACTGCAAAAAGATCCTGATGTAGAAGAGATGAGAAGGATATTATCCTTGAGCTATGATGATCTTCCCCAACATTTGAAGACATGCTTACTGTATCTAAGCATATTTCCAGAAGATTATGAGATTGAGAGGGATCGACTAGTAGAGAGGTGGGTTGCTGAAGGATTCATTATTACAGAGGGGGGGCATGACTTGAAGGAAATAGGAGACTGTTATTTTAGTGATCTTATCAATAGAAGCATGATTGAACCGGTGAAAATCCAATACAATGGTCGAGTTTTTTCCTGCCGAGTCCATGATATGATTCTTGATCTCCTTACATGCAAGTCAACTGAAGAAAATTTTGCCACCTTCATGGGTGGCCAAAATCAGAAATTAGTGCTACAGGGTAAGGTTCGTCGGCTCTCTCTCAACTATTACACTCAAGATCACATCATGGTTCCATCAACAGCAATCATCACACATTGCCGATCTCTCAGTATTTTTGGGTATGCTGAACAGAAGCCTCCTCTTTCAATGTTTCCAGTTCTTCGTGTACTTGATATAGAAAATGGTGAAGATATGGAAAGCAGCTATACCAAACACATAAGGAAGCTGATTCAGTTGAAGTACCTGCGACTGAATGTAAGAAGCGTAGCTGAACTTCCTGAAAAACTTGGAGAGCTACAACATTTGCAGACTCTTGATCTCAGACGGACAAACATAAGAAAATTGCCAGAGAGCTTCGTTCGTCTGCAAAATTTGACATATTTGCGTGTCAATAATCTGGATTTGCCTGAAGGAATTGGACATCTGCATGCTCTGCAGGAGCTAACAGAGATCAGAATCAGCCAGGACTGCTTGGCATCTTCCTTGTTGGAGCTAAGAAATCTGACGAAGCACACATTGACTACAAAGTTTTCGCCGATAATTTAG
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| Protein seq | MASALTGVMTSVINKLTALLGKEYMKLKGVQGEVEFMIDELSSMNALLHRLAEEDQHLDVQTKEWRNQVREMYYDIEDCIDDFMHHLGHTDIAESAGLVHRMAQHLKTLRVRHQIANQIEKLKARVEDASKRRLRYKLDERTFNLSTAGAIDPRLPSLYAESDGLVGIEQPRDVVIKLLTEGEGASSQKLKVISIVGPGGLGKTTLANEVFRKLESQFQCRAFVSLSQQPDVKKIVRNIYCQVSQQEYGNIDIWDEEKLINATREFLTNKRYFVVIDDIWSTQAWKTIRCALFVNNCGSRIMTTTRNMAIAKSCCTPDHDRVFEIMPLSIDNSKSLFLKRIFGSKDVCIPQLDEVCYEILKKCGGSPLAIITIASLLANKANTKEEWERVRNSIGSTLQKDPDVEEMRRILSLSYDDLPQHLKTCLLYLSIFPEDYEIERDRLVERWVAEGFIITEGGHDLKEIGDCYFSDLINRSMIEPVKIQYNGRVFSCRVHDMILDLLTCKSTEENFATFMGGQNQKLVLQGKVRRLSLNYYTQDHIMVPSTAIITHCRSLSIFGYAEQKPPLSMFPVLRVLDIENGEDMESSYTKHIRKLIQLKYLRLNVRSVAELPEKLGELQHLQTLDLRRTNIRKLPESFVRLQNLTYLRVNNLDLPEGIGHLHALQELTEIRISQDCLASSLLELRNLTKHTLTTKFSPII |
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| Function | Disease resistance protein Piks-2 [UniProtKB/Swiss-Prot:P0DO10] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os12g0565100 | Os12t0565100-01 | Chr12 | 23182563 | 23188498 | + | irgsp1_rep | ||
| CDS seq | ATGGCAAGTGCCTTGACGGGAGTGATGACATCCGTCATCAACAAGCTCACTGCTCTTCTTGGGAAGGAGTACATGAAGTTGAAAGGAGTACAGGGGGAGGTGGAGTTTATGATAGATGAGCTGAGCAGCATGAATGCTCTCCTTCATAGGCTGGCGGAGGAGGACCAACACCTTGATGTGCAAACGAAGGAGTGGCGTAACCAAGTGCGCGAAATGTATTATGACATTGAGGACTGTATCGATGACTTCATGCATCACCTTGGCCATACTGACATTGCTGAGTCTGCAGGGCTTGTCCATAGGATGGCCCAACACCTTAAGACTCTGAGGGTGCGCCACCAAATTGCCAACCAAATCGAGAAGCTCAAAGCACGCGTTGAAGATGCAAGCAAGCGGCGATTGAGGTATAAGCTTGATGAGCGCACCTTCAATCTTAGTACTGCAGGGGCCATTGACCCCCGGTTACCTTCTCTATATGCTGAGTCAGACGGGCTTGTTGGAATTGAACAACCAAGGGATGTGGTTATCAAGTTGCTAACGGAGGGAGAGGGTGCATCATCGCAGAAGCTAAAGGTGATATCCATTGTGGGTCCTGGAGGTCTAGGTAAAACTACACTTGCGAATGAGGTGTTTCGCAAACTAGAGAGCCAGTTCCAGTGTCGAGCTTTTGTTTCTCTGTCACAGCAGCCTGATGTGAAGAAGATTGTAAGAAACATATACTGTCAAGTCAGCCAGCAGGAGTATGGTAACATAGATATATGGGATGAGGAAAAGCTGATAAACGCAACCCGAGAATTCCTAACGAACAAGAGGTACTTTGTCGTCATTGATGATATATGGAGTACTCAAGCATGGAAGACCATAAGATGTGCTTTATTTGTGAATAATTGTGGAAGCAGAATAATGACGACAACACGCAATATGGCAATAGCCAAGTCATGTTGCACTCCTGACCATGATCGTGTCTTTGAAATAATGCCTCTTAGTATAGATAACTCGAAGAGTTTGTTTTTGAAACGAATATTTGGCTCAAAGGATGTGTGCATTCCTCAATTGGATGAGGTTTGTTATGAAATATTGAAAAAATGTGGCGGGTCGCCATTGGCTATTATTACAATAGCTAGCTTATTGGCTAATAAAGCTAATACCAAGGAAGAATGGGAAAGGGTGCGTAATTCTATCGGTTCAACACTGCAAAAAGATCCTGATGTAGAAGAGATGAGAAGGATATTATCCTTGAGCTATGATGATCTTCCCCAACATTTGAAGACATGCTTACTGTATCTAAGCATATTTCCAGAAGATTATGAGATTGAGAGGGATCGACTAGTAGAGAGGTGGGTTGCTGAAGGATTCATTATTACAGAGGGGGGGCATGACTTGAAGGAAATAGGAGACTGTTATTTTAGTGATCTTATCAATAGAAGCATGATTGAACCGGTGAAAATCCAATACAATGGTCGAGTTTTTTCCTGCCGAGTCCATGATATGATTCTTGATCTCCTTACATGCAAGTCAACTGAAGAAAATTTTGCCACCTTCATGGGTGGCCAAAATCAGAAATTAGTGCTACAGGGTAAGGTTCGTCGGCTCTCTCTCAACTATTACACTCAAGATCACATCATGGTTCCATCAACAGCAATCATCACACATTGCCGATCTCTCAGTATTTTTGGGTATGCTGAACAGAAGCCTCCTCTTTCAATGTTTCCAGTTCTTCGTGTACTTGATATAGAAAATGGTGAAGATATGGAAAGCAGCTATACCAAACACATAAGGAAGCTGATTCAGTTGAAGTACCTGCGACTGAATGTAAGAAGCGTAGCTGAACTTCCTGAAAAACTTGGAGAGCTACAACATTTGCAGACTCTTGATCTCAGACGGACAAACATAAGAAAATTGCCAGAGAGCTTCGTTCGTCTGCAAAATTTGACATATTTGCGTGTCAATAATCTGGATTTGCCTGAAGGAATTGGACATCTGCATGCTCTGCAGGAGCTAACAGAGATCAGAATCAGCCAGGACTGCTTGGCATCTTCCTTGTTGGAGCTAAGAAATCTGACGAAGCACACATTGACTACAAAGTTTTCGCCGATAATTTAG
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| Protein seq | MASALTGVMTSVINKLTALLGKEYMKLKGVQGEVEFMIDELSSMNALLHRLAEEDQHLDVQTKEWRNQVREMYYDIEDCIDDFMHHLGHTDIAESAGLVHRMAQHLKTLRVRHQIANQIEKLKARVEDASKRRLRYKLDERTFNLSTAGAIDPRLPSLYAESDGLVGIEQPRDVVIKLLTEGEGASSQKLKVISIVGPGGLGKTTLANEVFRKLESQFQCRAFVSLSQQPDVKKIVRNIYCQVSQQEYGNIDIWDEEKLINATREFLTNKRYFVVIDDIWSTQAWKTIRCALFVNNCGSRIMTTTRNMAIAKSCCTPDHDRVFEIMPLSIDNSKSLFLKRIFGSKDVCIPQLDEVCYEILKKCGGSPLAIITIASLLANKANTKEEWERVRNSIGSTLQKDPDVEEMRRILSLSYDDLPQHLKTCLLYLSIFPEDYEIERDRLVERWVAEGFIITEGGHDLKEIGDCYFSDLINRSMIEPVKIQYNGRVFSCRVHDMILDLLTCKSTEENFATFMGGQNQKLVLQGKVRRLSLNYYTQDHIMVPSTAIITHCRSLSIFGYAEQKPPLSMFPVLRVLDIENGEDMESSYTKHIRKLIQLKYLRLNVRSVAELPEKLGELQHLQTLDLRRTNIRKLPESFVRLQNLTYLRVNNLDLPEGIGHLHALQELTEIRISQDCLASSLLELRNLTKHTLTTKFSPII
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os12g0565100 | Os12t0565100-02 | Chr12 | 23182648 | 23187807 | + | irgsp1_rep | ||
| CDS seq | ATGGCAAGTGCCTTGACGGGAGTGATGACATCCGTCATCAACAAGCTCACTGCTCTTCTTGGGAAGGAGTACATGAAGTTGAAAGGAGTACAGGGGGAGGTGGAGTTTATGATAGATGAGCTGAGCAGCATGAATGCTCTCCTTCATAGGCTGGCGGAGGAGGACCAACACCTTGATGTGCAAACGAAGGAGTGGCGTAACCAAGTGCGCGAAATGTATTATGACATTGAGGACTGTATCGATGACTTCATGCATCACCTTGGCCATACTGACATTGCTGAGTCTGCAGGGCTTGTCCATAGGATGGCCCAACACCTTAAGACTCTGAGGGTGCGCCACCAAATTGCCAACCAAATCGAGAAGCTCAAAGCACGCGTTGAAGATGCAAGCAAGCGGCGATTGAGGTATAAGCTTGATGAGCGCACCTTCAATCTTAGTACTGCAGGGGCCATTGACCCCCGGTTACCTTCTCTATATGCTGAGTCAGACGGGCTTGTTGGAATTGAACAACCAAGGGATGTGGTTATCAAGTTGCTAACGGAGGGAGAGGGTGCATCATCGCAGAAGCTAAAGGTGATATCCATTGTGGGTCCTGGAGGTCTAGGTAAAACTACACTTGCGAATGAGGTGTTTCGCAAACTAGAGAGCCAGTTCCAGTGTCGAGCTTTTGTTTCTCTGTCACAGCAGCCTGATGTGAAGAAGATTGTAAGAAACATATACTGTCAAGTCAGCCAGCAGGAGTATGGTAACATAGATATATGGGATGAGGAAAAGCTGATAAACGCAACCCGAGAATTCCTAACGAACAAGAGGTACTTTGTCGTCATTGATGATATATGGAGTACTCAAGCATGGAAGACCATAAGATGTGCTTTATTTGTGAATAATTGTGGAAGCAGAATAATGACGACAACACGCAATATGGCAATAGCCAAGTCATGTTGCACTCCTGACCATGATCGTGTCTTTGAAATAATGCCTCTTAGTATAGATAACTCGAAGAGTTTGTTTTTGAAACGAATATTTGGCTCAAAGGATGTGTGCATTCCTCAATTGGATGAGGTTTGTTATGAAATATTGAAAAAATGTGGCGGGTCGCCATTGGCTATTATTACAATAGCTAGCTTATTGGCTAATAAAGCTAATACCAAGGAAGAATGGGAAAGGGTGCGTAATTCTATCGGTTCAACACTGCAAAAAGATCCTGATGTAGAAGAGATGAGAAGGATATTATCCTTGAGCTATGATGATCTTCCCCAACATTTGAAGACATGCTTACTGTATCTAAGCATATTTCCAGAAGATTATGAGATTGAGAGGGATCGACTAGTAGAGAGGTGGGTTGCTGAAGGATTCATTATTACAGAGGGGGGGCATGACTTGAAGGAAATAGGAGACTGTTATTTTAGTGATCTTATCAATAGAAGCATGATTGAACCGGTGAAAATCCAATACAATGGTCGAGTTTTTTCCTGCCGAGTCCATGATATGATTCTTGATCTCCTTACATGCAAGTCAACTGAAGAAAATTTTGCCACCTTCATGGGTGGCCAAAATCAGAAATTAGTGCTACAGGGTAAGGTTCGTCGGCTCTCTCTCAACTATTACACTCAAGATCACATCATGGTTCCATCAACAGCAATCATCACACATTGCCGATCTCTCAGTATTTTTGGGTATGCTGAACAGAAGCCTCCTCTTTCAATGTTTCCAGTTCTTCGTGTACTTGATATAGAAAATGGTGAAGATATGGAAAGCAGCTATACCAAACACATAAGGAAGCTGATTCAGTTGAAGTACCTGCGACTGAATGTAAGAAGCGTAGCTGAACTTCCTGAAAAACTTGGAGAGCTACAACATTTGCAGACTCTTGATCTCAGACGGACAAACATAAGAAAATTGCCAGAGAGCTTCGTTCGTCTGCAAAATTTGACATATTTGCGTGTCAATAATCTGGATTTGCCTGAAGGAATTGGACATCTGCATGCTCTGCAGGAGCTAACAGAGATCAGAATCAGCCAGGACTGCTTGGCATCTTCCTTGTTGGAGCTAAGAAATCTGACGAAGCACACATTGACTACAAAGTTTTCGCCGATAATTTAG
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| Protein seq | MASALTGVMTSVINKLTALLGKEYMKLKGVQGEVEFMIDELSSMNALLHRLAEEDQHLDVQTKEWRNQVREMYYDIEDCIDDFMHHLGHTDIAESAGLVHRMAQHLKTLRVRHQIANQIEKLKARVEDASKRRLRYKLDERTFNLSTAGAIDPRLPSLYAESDGLVGIEQPRDVVIKLLTEGEGASSQKLKVISIVGPGGLGKTTLANEVFRKLESQFQCRAFVSLSQQPDVKKIVRNIYCQVSQQEYGNIDIWDEEKLINATREFLTNKRYFVVIDDIWSTQAWKTIRCALFVNNCGSRIMTTTRNMAIAKSCCTPDHDRVFEIMPLSIDNSKSLFLKRIFGSKDVCIPQLDEVCYEILKKCGGSPLAIITIASLLANKANTKEEWERVRNSIGSTLQKDPDVEEMRRILSLSYDDLPQHLKTCLLYLSIFPEDYEIERDRLVERWVAEGFIITEGGHDLKEIGDCYFSDLINRSMIEPVKIQYNGRVFSCRVHDMILDLLTCKSTEENFATFMGGQNQKLVLQGKVRRLSLNYYTQDHIMVPSTAIITHCRSLSIFGYAEQKPPLSMFPVLRVLDIENGEDMESSYTKHIRKLIQLKYLRLNVRSVAELPEKLGELQHLQTLDLRRTNIRKLPESFVRLQNLTYLRVNNLDLPEGIGHLHALQELTEIRISQDCLASSLLELRNLTKHTLTTKFSPII
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0565100 | RBH | 0.815180 | 0.074739 | 0.242334 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g37760 | RBH | 0.548321 | 0.422844 | 0.202081 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0017530 | SBH | 0.104096 | 3.132582 | 0.656623 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0017650 | SBH | 0.065419 | 1.110321 | 0.333989 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0018020 | SBH | 0.703084 | 3.187606 | 2.560100 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0017340 | SBH | 0.094713 | 0.066143 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0016920 | SBH | 0.381773 | 4.969097 | 2.042245 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0307500 | RBH | 0.927202 | 4.4092855 | 2.148691 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0016830 | SBH | 0.162466 | 0.145908 | 0.356196 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0338900 | SBH | 0.7873095 | 5.0799875 | 3.081101 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0017070 | SBH | 0.168214 | 0.147196 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0017320 | SBH | 0.066410 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0017270 | SBH | 0.983978 | 5.304365 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0017250 | SBH | 0.071227 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0017430 | SBH | 0.000000 | 0.957320 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G017190 | SBH | 0.089147 | 0.488428 | 0.717387 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0016860 | SBH | 0.134073 | 6.797035 | 0.0 |
