Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
Os11g0668100 OGI:11076840 | 15/16 Nipponbare | IRGSP 1.0 | RAP-db Chr11:26953151-26960443
Gene Symbol -
DNA seq

TTAGCCACTCAAATACAAAACGGGAATGCTGCTGCTGCTGCTGCTACCATGGGGAGAATGAGTAGATTCCAAAGCAATTGTTACTCTAGGAATATGCTGGATCTTGTGCCAGTTTGGATGCCCAATTGTTTTGCAAGACCTCATGAACTCGTCATCGCAGGCCCCCAATCCAAACTCCTCAAGAGATCGGGGCAGCTTTGGAAGCGACTGAATGTTCAAGCAAAAATACATCTTCAGTTCATGGAGTGACATGAGTTGCTCCAGATTATCTGGCAAGAAGTTCCAGCTGCTTTTCCAAAGCCAGAGTGAACGGAGATGAATGAAAAACTCAAAGAGTTCAGGGGCAGGTCCCAGTCGGCTGCATCCACTGAGCTCAAGTTCGCGCAGGTACTTTGGGCCTTTGTGACCTCCGATCATCCAATCTGGGTAGCTTGAACCGTGATAATCTGTTATTTCTAGTCTTTCAAGCTCCAATGGTGGGCAAAGGCCCTCAAGCACCTCTGCCTCAACCTCTGGACTGCAGCTCTCATCATCCCAGACAAGTACCAGTTCTTTCAGGCGTTCCTTGCCATCTAATTTGGCTTCAAGAGCTTCCTCCTTGCTCCCAACGTTTCCAAGACCGTGGATATGTAGCTTGCCACGAAGCTTGTTTAGGTGTCTCAGCTGCTGTAATTCATACCCTGGTTCCTTCTTTACTGGGAACAATGGTAATGTTTGCAGTGACGTTAGCATGCCGATGTTTGGACAATTCAGATCAGCCGTGGCGATTATATGCTGCAAGTTGATGAGATTACTCATGTCTTCGCCAGAGGGAAACACTAAATCTCCACATACACCAAAATCTAGCACATGCATATAGCGAAGCTTGGCAATTGTGTTTGGTAAAACTTGTCTGATCAAGGTTGTCCGAAAACAAAGATGGCGTAGATGCCTCAGTTGACCAATAGATTCTGGGAATGAGAACACATGCGATCCTGTGATGATTTTAACGCTCAGTACCCGCAACTTCCTCAGCCTCATGAACATTCTTTCAAATATCTTTTCTTCAGTTGGTATTTCTGTATTGCCACTATAAATAATCAGAGTGCGTAAATTTCCCATTTTCAAAACCTTTTCAGTAATCATCGTTTTATTATAACTCTCGATATAAAGGTGGCGAACATCTCCAGGAAGATCTCCTGTCCAGCCATTCTCAACTTTGAAGCAATCATTTCTAGCAACCTTCTCTGCTAAATCGTGAAGCAGATCATGAACCGTGAAGTATTCGGAGGCACCAAACCTTTCTGCTTGTTTTTCTCCTAGTTGCAGAAATGAGGCTGATACCAATTCCTCAAAGTACTTTCTACCAACAGCCTCCATTTCTAATCCTACTTCAGTAGTCGTTATAAACCCTTCTGCCACCCACAAGTTAATTAACTCATGGCGTTCCAGCCGATGTCTTCTGGGGAAAATACTGCAGTAAGCAAAGCACCGTCTTACCTGCTGATCAAGGTGCTGGTAGCTCCACCATAGAGCTCCCATTGTCTCATTCAAGAGGTTCTGATTTCGAGCATCTTGCCAAAAGTCAATTGTTGGTCTCATGTGTAGTTGCCCTCCAACTGTTCTGGCTGCCAGAGGTGATCTCTTCAGCTTTTTTGCAATGTCAGATCCTATAGCTCTGAATATCATCCGATCGCGTTCATCTATGCCTGCACTGTCGAGAGCATAGTGCATGAAAAGTTCAAGGAACACAGTGTCATCCAATTCAGATATCGGAATACATTTTGCAGCACCCAAAGCTAATAATGCATCTCTAGTTCGACTAGTTAGTAGGATCTTACTTCCTAAAGCCCCAACCTTAAGTGGAAAAAGAATCTTTTGTAGCTCCTCCTGACTGTCATCCTTGTTGTACCATACATCATCTAGTACCAAAAGGAACCGTTTTCGACTCAATGCCTGTTCCAGCTTCTGCTCTAGGGTGTTAAGACTATTGAACTGAGGGCAAGAGTTCCCTGTAGCCTCTTCAAGCATCTTACTGAAAATCTTATCCACATTAAAATTCCTAGAAACATGAACCCACATGATAAGGTCGAAATGGCCAGCCTCTTTCTCTTGCCTGCCCCTTTTCTCATGGGCACAAACATACTGTGCAAGGGTAGATTTCCCGGACCCAGGAATGCCATGGATGCCAATGATGGAATGGGATAATGCACGACTGGGTTCATGTTGACCATCATTTTCTGTCTCATGAAGCAATACTAAGATCTTATCACGATCTTCATCTCGGCCAATTACTACAAATGGAGGAGATGCAGTAGTGACTGCAATACGTGAATCGTCAGAAACAGTTTGTCTCTTGTTGATATTACTGTGGCCTGGCAAATTCAGAAGCTGCAAAATTTTGTGTCCATCGTTGATAATATTTTCTATCTTCTTTAGGATTTTCTTCAACTCCAATTTTGACATATTAGGAGGAGGAGCATCTGAAGGCTGTAAAACAAAATTAGCAGGTCAGGTTTTTATGGTATTTTACAGGAACTCATCAATCATTCATCACCACCCCCCTCACATAAAAGGACTGACATAACTTGCGTAAATCTATCTATTATATTATTAAAGGAATAGAAAAAGGAGCCTCCACGTTCGCTCTCATGGCCTAGAAATTCTCACGTTAATCGGAGAAAAAGAAAAAGCAGAGTCCATATAGAAATACATTTAGAAATAGCTGAAATTTGGAATTAAAAATTAAGGAACATTAGAAGAGGAGACTAGAGTCCATATAGAAATACAATTTAGAAATAGTTGAAATTCGGAATTAAAAAATAAGAAATATTAGAAGAGGAGACTAGAGTCCATATAGAAATACAATTAGGAAATAACTGAAAGTCGGAATTAAAAATAAGGAATATTAGAAGTAGAGTATAGAGTTCATATAGAAATACAATTAGGAAATAGCTGAAATTCGGAATTAAAAAATAAGGAATATTAAAAGAGGATACTAGAGTCCATATAGAAATACAATTAGGAAATAGCTGTAATTCGGAATTAAAAAATAAGGAATATTAAAAGAGAAGACTAGAGTCCATATAGAAATACAATTAGAAAATAACTGAAATTCGGAATTAAAAAATAAGGAATATTAGAAGTAAAGTATAGAGTCCATATAGAAATACAATGAAGAAAAAAAGGAAATTTGGAATTAAAAAATAAGGAATATTAGAAGTAGAGTATAGAGTCCATACATGAATTTGAAACTAACTAAAATTCGGAATAAATGTGATAAAATTAAAAGTAGAGTTTAGAGTCCGTATAAAAATACAATTTACAAATAACTAAAATTCGAAATTAAGAAAAACATGGGAAGAAGAGTTTAAAGTCAATATAGGAATACAATTTAGAAGTAACTGAAATTTGAAATTAAAAATTAAAGAATATTGAAAGATGAGTTTAGAGTCCACATAGAAATACAATTAGAAATAATAAAAATTTAGAATTAAAAAAAAATAAAAGACGAGTCTAGAGTCCATAAAGGAATATATATAATTTATAGATAACTAAAATTTGATAGTAAAAATAATTAATAACTAACACGTATATAAAATACAATATGAATATTACACATTAGTAGTTTCGTAAAGTTATTGCAAAATTTAAAATTATGTTGTCATTGTAATATATTTTAATAATATAATGAGAAAACATATATGCTATTATATGAGAGAAAATATAATGATGCTAGCCGCGCAATCTGCGCGGGCCTCCATGCTAGTTATATAATTAAAGGAATAGAAAAAGGAGCCTCCACGTTCGCTCTCATGGCCTGGAAATTCTCACATTAATCGGAGAAAAAGAAGAAAAAGAAAAAGCAAAGTCCATATAGAAATACAATTTAAAAATAGTGAAATTCGGAATTAAAAAATAAGGAATATTAGAAGAGGAGACTAGAGTCCATATAGAAATACAATTAGGAAATAACTGAAATTCGGAATTAAAATATAAGGAATATTATAAGAGGAGACTAGAGTCCATATAGAAATACAATTAGGAAATAACTGAAATTCGGAATTAAAATATAAGGAATATTAGAAAAGGAGACTAGAGTCTATATAGAAATACAATTAGGAAATAACTGAAATTCGGAATTAAAAATAAGGAATATTAGAAGTAGAGTATATAGAGTCTATATAGAAATACAATTAGGAAATAACTGAAATTCGGAATTAAAAATAAGGAATATTAGAAGTAGAGTATATAGTTCATATAGAAGCCTCCACGTTCGCTCTCATGGCCTAGAAATTCTCACATTAATCGGAGAAAAAGAAGAAAAAGAAAAAGCAAAGTCCATATAGAAATACAATTTAAAAATAGTGAAATTCGGAATTAAAAAATAAGGAATATTAGAAGAGGAGACTAGAGTCCATATAGAAATACAATTAGGAAATAACTGAAATTCGGAATTAAAATATAAGGAATATTATAAGAGGAGACTAGAGTCCATATAGAAATACAATTAGGAAATAACTGAAATTCGGAATTAAAATATAAGGAATATTAGAAAAGGAGACTAGAGTCTATATAGAAATACAATTAGGAAATAACTGAAATTCGGAATTAAAAATAAGGAATATTAGAAGTAGAGTATATAGTTCATATAGAAATACAATTAGGAAATGAAAGAAATTTGGAGTTAAAAATAAGGAATATTAGAAATAGAGTATAGAGTCCATATAGAAATACAATTAAGAAAAAAAAATAGAAATTCGGAATTAAAAAATAAGGATTATTAGAAGTAGAGTATAGAGTTCATATAGAAATTTAAAACTAACTTAAATTTGGAATAAACATAATAAAATAAAAGTAGAGTTTAGAGTCCGTATAAAAATACAATTTACAAATAACTATAAAATTCAAAATTAAGAAAAACATGGGAAGAAGAGTTTAAGGTCAATATAGGAATACATATATAGGAATACAATTTAAAAGTAACTGAAATTCGAAATTAAAAATTAAAGAATATTGAAAGATGAGTTTCGAGTCCACATAGAAATACAATTAGAAATAATAAAAATTCAGAAATAAAAATAAATAATATTGGAAGAAGAGCCTAAAGTCTATATAGAAATACAATTTACAGAAAATTCGAAATTAAAAAAAGAAATATTAAAAGACGAGTCTAGAGTCTATATAGGAATATATATAATTTACAAATAACTAAAATTTGATATTAAAAATAATTAATAACTAACACGTATATAAAATATAATATAAAAATTCAGAAATAAAAATAAATAATATAAAAAAATATAATAATGCTAACCGCGCAATTTGCGCGGGCCACCATGCTAGTTTATATAAAAAGATAAGGATTCGTTGAAGAAAATAGAACTTCCGCAGTTCCCTCCAAGAACGACTGCTAAAATGCATTGTGCATTAGGTCTTTGGTACCCTATCTCCTTCAAGTTGAGTCTCCAGTGATGGATTGTTACAGATAGCTTGAATTTGTACATATTTTTTTCCTAGGAAGTTGGTATCTCCGGTGGCGGTGGTTGCAGGAAACAAGAACACAGTGAGGCGACGTGCACTAGTGGCAAGCTACTCTGCAGCAGCCACAGATATTGATACAAGCATGCATAGATGTACTGAAGAGGAATATTGTTTTGCTGCACCAATTGTATGTTTTAGTTTGACAGAAAGGAAACCTGCACTGGAAAAGAATATCCTGTTTTGTATATTTAATGTTATGATTCAGTTCAACAAAATTCTTTTTTCTTTCTGATTACCCTGTGTGAAAGAAAAAAAAAGACTCATTCCAGTGAATACTACAAAGGAAATCTATAAGTTCAGTTATACTAAGAATGTTGTGTGTTCTAGGAGTCACCCTTTGGAGTTATAGCACATAGGTTCAGAGTTCTTATAGGCGCAGTACAATTATGGATGAATTTGTCATATCAACAAAATACTGTAGCCCTTGCAAGGAAATCTTTATCGAACAGAATATGAAAAGATTTCTGGTGTTGAGTAAATTACAAAGAGATTTTTTACTGTCGTTGAGACTGTGCCGTACTAAATCGTGACCGTTGATCTGACATCATCCAACAGTAAAAAAAACGTCGGTACCTCATGGTACCGCACCTTCCCAATGGAGTGGTACCGTGGGTGGGGGGTAGTTTTGTACTTTCGCGTTGTATCGGCATCTCTTCCTTCTCTGTTCGCGGGAGAAAACGAATCGCTGGGCAGGAGCAGCAAGAGAAACGACGATGGTCCAGTTCAGGCCGTCAGGAGCAGCAAGAGAAACGACGATGGCTGGTCTGCGCCAGAGACGCAGGAAGAACGGAGTCCACAGCAGCAGCGGGGTGGAAGCGACGCCGGAGTCTTCGAGGTGGATGCGACGACGGGATGCGCTGGTCTTGATGCGACGGCGGCCGCGGCGGCCTCGATGCGACGGGATGCCCCGGTCTTGATGCGACGCGCGGCCGCGGCGGCCTCGATGCAACGTCAGCTGCGGCGGCCTCGATGTGACATCAGCCGCGGCGGACTAGCTGCGATGCGACGGCGGCCGCGGCGGATTCGATGCGGCACGGAGATGCTATTGGCTGAGAGGCTGAGATGGGTGGTGATTAGCGCCGCCCTAAATTTGTTTAGTCCGATCGTACCCTTTCTAAATCAACGGTTAGATTAGATCGGTACCTCATGGTACCTCGTACCTTATAATACCTCATGGTATCTCCTCAAGGATGAGAAAAATGCTCAATTACAAAAGGGTTTCCTTTCCAGGGTGTAAAAGATTACAAAGCTTTAGTATTATGATACAACCAACAGTTAGATAAGAAATAGAAGAGCAATAATAGCAGGCAAAACATATTGGCATATTATGACAACAAAGTTCACCTTCAGACTTCAGAGGGTCTCAAGCAGGACAGTAATACCTGGTTTTTTATGCGGACGCTCTTCGGTAGGGCAGACTGGAGCATCTACACCAAATTCCTCCTACGAGGAGGCCTGCCGTTTGACTCCAAATTGTCATCAGGCTGAGATGAGATCTGCCTTTCAAGACGGTGATACTCAATATCATCCAAGATGTCTTCAGCTTCATAGACAGCCGACCTAAGCTGCTGCAACCATTCCTCCAAACGGCCCCTGTGAGGACTCTCCTCAACTGCTTCCAGCACTAGTTCCAGCTGTAGAACTTTAGTCTGAAGTTGTTTCAGCTTCTCTGATCCATGAAAGCCGAGGTAGGAGAAGCCTTTGTTGAGGATCTTGGTGATGATCGGTGAGACGACCCAACCTACAGCAGATATGCCCCAGCCAACTGCG

More
CDS seq

ATGCTCCAGTCTGCCCTACCGAAGAGCGTCCGCATAAAAAACCAGGTATTACTGTCCTGCTTGAGACCCTCTGAATTGAAGAAAATCCTAAAGAAGATAGAAAATATTATCAACGATGGACACAAAATTTTGCAGCTTCTGAATTTGCCAGGCCACAGTAATATCAACAAGAGACAAACTGTTTCTGACGATTCACGTATTGCAGTCACTACTGCATCTCCTCCATTTGTAGTAATTGGCCGAGATGAAGATCGTGATAAGATCTTAGTATTGCTTCATGAGACAGAAAATGATGGTCAACATGAACCCAGTCGTGCATTATCCCATTCCATCATTGGCATCCATGGCATTCCTGGGTCCGGGAAATCTACCCTTGCACAGTATGTTTGTGCCCATGAGAAAAGGGGCAGGCAAGAGAAAGAGGCTGGCCATTTCGACCTTATCATGTGGGTTCATGTTTCTAGGAATTTTAATGTGGATAAGATTTTCAGTAAGATGCTTGAAGAGGCTACAGGGAACTCTTGCCCTCAGTTCAATAGTCTTAACACCCTAGAGCAGAAGCTGGAACAGGCATTGAGTCGAAAACGGTTCCTTTTGGTACTAGATGATGTATGGTACAACAAGGATGACAGTCAGGAGGAGCTACAAAAGATTCTTTTTCCACTTAAGGTTGGGGCTTTAGGAAGTAAGATCCTACTAACTAGTCGAACTAGAGATGCATTATTAGCTTTGGGTGCTGCAAAATGTATTCCGATATCTGAATTGGATGACACTGTGTTCCTTGAACTTTTCATGCACTATGCTCTCGACAGTGCAGGCATAGATGAACGCGATCGGATGATATTCAGAGCTATAGGATCTGACATTGCAAAAAAGCTGAAGAGATCACCTCTGGCAGCCAGAACAGTTGGAGGGCAACTACACATGAGACCAACAATTGACTTTTGGCAAGATGCTCGAAATCAGAACCTCTTGAATGAGACAATGGGAGCTCTATGGTGGAGCTACCAGCACCTTGATCAGCAGGTAAGACGGTGCTTTGCTTACTGCAGTATTTTCCCCAGAAGACATCGGCTGGAACGCCATGAGTTAATTAACTTGTGGGTGGCAGAAGGGTTTATAACGACTACTGAAGTAGGATTAGAAATGGAGGCTGTTGGTAGAAAGTACTTTGAGGAATTGGTATCAGCCTCATTTCTGCAACTAGGAGAAAAACAAGCAGAAAGGTTTGGTGCCTCCGAATACTTCACGGTTCATGATCTGCTTCACGATTTAGCAGAGAAGGTTGCTAGAAATGATTGCTTCAAAGTTGAGAATGGCTGGACAGGAGATCTTCCTGGAGATGTTCGCCACCTTTATATCGAGAGTTATAATAAAACGATGATTACTGAAAAGGTTTTGAAAATGGGAAATTTACGCACTCTGATTATTTATAGTGGCAATACAGAAATACCAACTGAAGAAAAGATATTTGAAAGAATGTTCATGAGGCTGAGGAAGTTGCGGGTACTGAGCGTTAAAATCATCACAGGATCGCATGTGTTCTCATTCCCAGAATCTATTGGTCAACTGAGGCATCTACGCCATCTTTGTTTTCGGACAACCTTGATCAGACAAGTTTTACCAAACACAATTGCCAAGCTTCGCTATATGCATGTGCTAGATTTTGGTGTATGTGGAGATTTAGTGTTTCCCTCTGGCGAAGACATGAGTAATCTCATCAACTTGCAGCATATAATCGCCACGGCTGATCTGAATTGTCCAAACATCGGCATGCTAACGTCACTGCAAACATTACCATTGTTCCCAGTAAAGAAGGAACCAGGGTATGAATTACAGCAGCTGAGACACCTAAACAAGCTTCGTGGCAAGCTACATATCCACGGTCTTGGAAACGTTGGGAGCAAGGAGGAAGCTCTTGAAGCCAAATTAGATGGCAAGGAACGCCTGAAAGAACTGGTACTTGTCTGGGATGATGAGAGCTGCAGTCCAGAGGTTGAGGCAGAGGTGCTTGAGGGCCTTTGCCCACCATTGGAGCTTGAAAGACTAGAAATAACAGATTATCACGGTTCAAGCTACCCAGATTGGATGATCGGAGGTCACAAAGGCCCAAAGTACCTGCGCGAACTTGAGCTCAGTGGATGCAGCCGACTGGGACCTGCCCCTGAACTCTTTGAGTTTTTCATTCATCTCCGTTCACTCTGGCTTTGGAAAAGCAGCTGGAACTTCTTGCCAGATAATCTGGAGCAACTCATGTCACTCCATGAACTGAAGATGTATTTTTGCTTGAACATTCAGTCGCTTCCAAAGCTGCCCCGATCTCTTGAGGAGTTTGGATTGGGGGCCTGCGATGACGAGTTCATGAGGTCTTGCAAAACAATTGGGCATCCAAACTGGCACAAGATCCAGCATATTCCTAGAGTAACAATTGCTTTGGAATCTACTCATTCTCCCCATGGTAGCAGCAGCAGCAGCAGCATTCCCGTTTTGTATTTGAGTGGCTAA

More
Protein seq

MLQSALPKSVRIKNQVLLSCLRPSELKKILKKIENIINDGHKILQLLNLPGHSNINKRQTVSDDSRIAVTTASPPFVVIGRDEDRDKILVLLHETENDGQHEPSRALSHSIIGIHGIPGSGKSTLAQYVCAHEKRGRQEKEAGHFDLIMWVHVSRNFNVDKIFSKMLEEATGNSCPQFNSLNTLEQKLEQALSRKRFLLVLDDVWYNKDDSQEELQKILFPLKVGALGSKILLTSRTRDALLALGAAKCIPISELDDTVFLELFMHYALDSAGIDERDRMIFRAIGSDIAKKLKRSPLAARTVGGQLHMRPTIDFWQDARNQNLLNETMGALWWSYQHLDQQVRRCFAYCSIFPRRHRLERHELINLWVAEGFITTTEVGLEMEAVGRKYFEELVSASFLQLGEKQAERFGASEYFTVHDLLHDLAEKVARNDCFKVENGWTGDLPGDVRHLYIESYNKTMITEKVLKMGNLRTLIIYSGNTEIPTEEKIFERMFMRLRKLRVLSVKIITGSHVFSFPESIGQLRHLRHLCFRTTLIRQVLPNTIAKLRYMHVLDFGVCGDLVFPSGEDMSNLINLQHIIATADLNCPNIGMLTSLQTLPLFPVKKEPGYELQQLRHLNKLRGKLHIHGLGNVGSKEEALEAKLDGKERLKELVLVWDDESCSPEVEAEVLEGLCPPLELERLEITDYHGSSYPDWMIGGHKGPKYLRELELSGCSRLGPAPELFEFFIHLRSLWLWKSSWNFLPDNLEQLMSLHELKMYFCLNIQSLPKLPRSLEEFGLGACDDEFMRSCKTIGHPNWHKIQHIPRVTIALESTHSPHGSSSSSSIPVLYLSG

Function Putative disease resistance protein RGA4 [UniProtKB/Swiss-Prot:Q7XA39]

Transcripts

Gene Transcript Chromosome Start End Strand Source
Os11g0668100 Os11t0668100-00 Chr11 26953151 26960443 - irgsp1_rep
CDS seq

ATGCTCCAGTCTGCCCTACCGAAGAGCGTCCGCATAAAAAACCAGGTATTACTGTCCTGCTTGAGACCCTCTGAATTGAAGAAAATCCTAAAGAAGATAGAAAATATTATCAACGATGGACACAAAATTTTGCAGCTTCTGAATTTGCCAGGCCACAGTAATATCAACAAGAGACAAACTGTTTCTGACGATTCACGTATTGCAGTCACTACTGCATCTCCTCCATTTGTAGTAATTGGCCGAGATGAAGATCGTGATAAGATCTTAGTATTGCTTCATGAGACAGAAAATGATGGTCAACATGAACCCAGTCGTGCATTATCCCATTCCATCATTGGCATCCATGGCATTCCTGGGTCCGGGAAATCTACCCTTGCACAGTATGTTTGTGCCCATGAGAAAAGGGGCAGGCAAGAGAAAGAGGCTGGCCATTTCGACCTTATCATGTGGGTTCATGTTTCTAGGAATTTTAATGTGGATAAGATTTTCAGTAAGATGCTTGAAGAGGCTACAGGGAACTCTTGCCCTCAGTTCAATAGTCTTAACACCCTAGAGCAGAAGCTGGAACAGGCATTGAGTCGAAAACGGTTCCTTTTGGTACTAGATGATGTATGGTACAACAAGGATGACAGTCAGGAGGAGCTACAAAAGATTCTTTTTCCACTTAAGGTTGGGGCTTTAGGAAGTAAGATCCTACTAACTAGTCGAACTAGAGATGCATTATTAGCTTTGGGTGCTGCAAAATGTATTCCGATATCTGAATTGGATGACACTGTGTTCCTTGAACTTTTCATGCACTATGCTCTCGACAGTGCAGGCATAGATGAACGCGATCGGATGATATTCAGAGCTATAGGATCTGACATTGCAAAAAAGCTGAAGAGATCACCTCTGGCAGCCAGAACAGTTGGAGGGCAACTACACATGAGACCAACAATTGACTTTTGGCAAGATGCTCGAAATCAGAACCTCTTGAATGAGACAATGGGAGCTCTATGGTGGAGCTACCAGCACCTTGATCAGCAGGTAAGACGGTGCTTTGCTTACTGCAGTATTTTCCCCAGAAGACATCGGCTGGAACGCCATGAGTTAATTAACTTGTGGGTGGCAGAAGGGTTTATAACGACTACTGAAGTAGGATTAGAAATGGAGGCTGTTGGTAGAAAGTACTTTGAGGAATTGGTATCAGCCTCATTTCTGCAACTAGGAGAAAAACAAGCAGAAAGGTTTGGTGCCTCCGAATACTTCACGGTTCATGATCTGCTTCACGATTTAGCAGAGAAGGTTGCTAGAAATGATTGCTTCAAAGTTGAGAATGGCTGGACAGGAGATCTTCCTGGAGATGTTCGCCACCTTTATATCGAGAGTTATAATAAAACGATGATTACTGAAAAGGTTTTGAAAATGGGAAATTTACGCACTCTGATTATTTATAGTGGCAATACAGAAATACCAACTGAAGAAAAGATATTTGAAAGAATGTTCATGAGGCTGAGGAAGTTGCGGGTACTGAGCGTTAAAATCATCACAGGATCGCATGTGTTCTCATTCCCAGAATCTATTGGTCAACTGAGGCATCTACGCCATCTTTGTTTTCGGACAACCTTGATCAGACAAGTTTTACCAAACACAATTGCCAAGCTTCGCTATATGCATGTGCTAGATTTTGGTGTATGTGGAGATTTAGTGTTTCCCTCTGGCGAAGACATGAGTAATCTCATCAACTTGCAGCATATAATCGCCACGGCTGATCTGAATTGTCCAAACATCGGCATGCTAACGTCACTGCAAACATTACCATTGTTCCCAGTAAAGAAGGAACCAGGGTATGAATTACAGCAGCTGAGACACCTAAACAAGCTTCGTGGCAAGCTACATATCCACGGTCTTGGAAACGTTGGGAGCAAGGAGGAAGCTCTTGAAGCCAAATTAGATGGCAAGGAACGCCTGAAAGAACTGGTACTTGTCTGGGATGATGAGAGCTGCAGTCCAGAGGTTGAGGCAGAGGTGCTTGAGGGCCTTTGCCCACCATTGGAGCTTGAAAGACTAGAAATAACAGATTATCACGGTTCAAGCTACCCAGATTGGATGATCGGAGGTCACAAAGGCCCAAAGTACCTGCGCGAACTTGAGCTCAGTGGATGCAGCCGACTGGGACCTGCCCCTGAACTCTTTGAGTTTTTCATTCATCTCCGTTCACTCTGGCTTTGGAAAAGCAGCTGGAACTTCTTGCCAGATAATCTGGAGCAACTCATGTCACTCCATGAACTGAAGATGTATTTTTGCTTGAACATTCAGTCGCTTCCAAAGCTGCCCCGATCTCTTGAGGAGTTTGGATTGGGGGCCTGCGATGACGAGTTCATGAGGTCTTGCAAAACAATTGGGCATCCAAACTGGCACAAGATCCAGCATATTCCTAGAGTAACAATTGCTTTGGAATCTACTCATTCTCCCCATGGTAGCAGCAGCAGCAGCAGCATTCCCGTTTTGTATTTGAGTGGCTAA

More
Protein seq

MLQSALPKSVRIKNQVLLSCLRPSELKKILKKIENIINDGHKILQLLNLPGHSNINKRQTVSDDSRIAVTTASPPFVVIGRDEDRDKILVLLHETENDGQHEPSRALSHSIIGIHGIPGSGKSTLAQYVCAHEKRGRQEKEAGHFDLIMWVHVSRNFNVDKIFSKMLEEATGNSCPQFNSLNTLEQKLEQALSRKRFLLVLDDVWYNKDDSQEELQKILFPLKVGALGSKILLTSRTRDALLALGAAKCIPISELDDTVFLELFMHYALDSAGIDERDRMIFRAIGSDIAKKLKRSPLAARTVGGQLHMRPTIDFWQDARNQNLLNETMGALWWSYQHLDQQVRRCFAYCSIFPRRHRLERHELINLWVAEGFITTTEVGLEMEAVGRKYFEELVSASFLQLGEKQAERFGASEYFTVHDLLHDLAEKVARNDCFKVENGWTGDLPGDVRHLYIESYNKTMITEKVLKMGNLRTLIIYSGNTEIPTEEKIFERMFMRLRKLRVLSVKIITGSHVFSFPESIGQLRHLRHLCFRTTLIRQVLPNTIAKLRYMHVLDFGVCGDLVFPSGEDMSNLINLQHIIATADLNCPNIGMLTSLQTLPLFPVKKEPGYELQQLRHLNKLRGKLHIHGLGNVGSKEEALEAKLDGKERLKELVLVWDDESCSPEVEAEVLEGLCPPLELERLEITDYHGSSYPDWMIGGHKGPKYLRELELSGCSRLGPAPELFEFFIHLRSLWLWKSSWNFLPDNLEQLMSLHELKMYFCLNIQSLPKLPRSLEEFGLGACDDEFMRSCKTIGHPNWHKIQHIPRVTIALESTHSPHGSSSSSSIPVLYLSG

More
Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM None None None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_11g0668100 RBH 0.545508 1.187026 0.660127
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g44580 RBH 0.270107 0.700377 0.157062
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0023060 RBH 0.721716 4.629389 1.179042
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0023140 RBH 0.000000 0.000000 1.017373
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_11g0022770 RBH 0.979597 4.284066 2.042390
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_11g0022460 RBH 0.124196 0.081978 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_11g0022720 RBH 2.844949 2.401514 2.983024
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0405000 RBH 2.546412 9.46714 0.3946455
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_11g0023620 RBH 0.393959 0.167419 0.935478
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0430200 SBH 14.200319 23.9624835 0.1261395
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_11g0023250 RBH 0.086567 0.000000 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0023370 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_11g0022960 RBH 0.000000 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_11g0022690 RBH 0.796213 0.0 0.076279
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_11g0022580 RBH 0.015212 0.477175 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G022940 RBH 0.684989 0.867905 0.231093
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_11g0023370 RBH 1.251961 12.032497 1.134784
Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.