Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
Os11g0668100 | OGI:11076840 | 15/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr11:26953151-26960443 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | TTAGCCACTCAAATACAAAACGGGAATGCTGCTGCTGCTGCTGCTACCATGGGGAGAATGAGTAGATTCCAAAGCAATTGTTACTCTAGGAATATGCTGGATCTTGTGCCAGTTTGGATGCCCAATTGTTTTGCAAGACCTCATGAACTCGTCATCGCAGGCCCCCAATCCAAACTCCTCAAGAGATCGGGGCAGCTTTGGAAGCGACTGAATGTTCAAGCAAAAATACATCTTCAGTTCATGGAGTGACATGAGTTGCTCCAGATTATCTGGCAAGAAGTTCCAGCTGCTTTTCCAAAGCCAGAGTGAACGGAGATGAATGAAAAACTCAAAGAGTTCAGGGGCAGGTCCCAGTCGGCTGCATCCACTGAGCTCAAGTTCGCGCAGGTACTTTGGGCCTTTGTGACCTCCGATCATCCAATCTGGGTAGCTTGAACCGTGATAATCTGTTATTTCTAGTCTTTCAAGCTCCAATGGTGGGCAAAGGCCCTCAAGCACCTCTGCCTCAACCTCTGGACTGCAGCTCTCATCATCCCAGACAAGTACCAGTTCTTTCAGGCGTTCCTTGCCATCTAATTTGGCTTCAAGAGCTTCCTCCTTGCTCCCAACGTTTCCAAGACCGTGGATATGTAGCTTGCCACGAAGCTTGTTTAGGTGTCTCAGCTGCTGTAATTCATACCCTGGTTCCTTCTTTACTGGGAACAATGGTAATGTTTGCAGTGACGTTAGCATGCCGATGTTTGGACAATTCAGATCAGCCGTGGCGATTATATGCTGCAAGTTGATGAGATTACTCATGTCTTCGCCAGAGGGAAACACTAAATCTCCACATACACCAAAATCTAGCACATGCATATAGCGAAGCTTGGCAATTGTGTTTGGTAAAACTTGTCTGATCAAGGTTGTCCGAAAACAAAGATGGCGTAGATGCCTCAGTTGACCAATAGATTCTGGGAATGAGAACACATGCGATCCTGTGATGATTTTAACGCTCAGTACCCGCAACTTCCTCAGCCTCATGAACATTCTTTCAAATATCTTTTCTTCAGTTGGTATTTCTGTATTGCCACTATAAATAATCAGAGTGCGTAAATTTCCCATTTTCAAAACCTTTTCAGTAATCATCGTTTTATTATAACTCTCGATATAAAGGTGGCGAACATCTCCAGGAAGATCTCCTGTCCAGCCATTCTCAACTTTGAAGCAATCATTTCTAGCAACCTTCTCTGCTAAATCGTGAAGCAGATCATGAACCGTGAAGTATTCGGAGGCACCAAACCTTTCTGCTTGTTTTTCTCCTAGTTGCAGAAATGAGGCTGATACCAATTCCTCAAAGTACTTTCTACCAACAGCCTCCATTTCTAATCCTACTTCAGTAGTCGTTATAAACCCTTCTGCCACCCACAAGTTAATTAACTCATGGCGTTCCAGCCGATGTCTTCTGGGGAAAATACTGCAGTAAGCAAAGCACCGTCTTACCTGCTGATCAAGGTGCTGGTAGCTCCACCATAGAGCTCCCATTGTCTCATTCAAGAGGTTCTGATTTCGAGCATCTTGCCAAAAGTCAATTGTTGGTCTCATGTGTAGTTGCCCTCCAACTGTTCTGGCTGCCAGAGGTGATCTCTTCAGCTTTTTTGCAATGTCAGATCCTATAGCTCTGAATATCATCCGATCGCGTTCATCTATGCCTGCACTGTCGAGAGCATAGTGCATGAAAAGTTCAAGGAACACAGTGTCATCCAATTCAGATATCGGAATACATTTTGCAGCACCCAAAGCTAATAATGCATCTCTAGTTCGACTAGTTAGTAGGATCTTACTTCCTAAAGCCCCAACCTTAAGTGGAAAAAGAATCTTTTGTAGCTCCTCCTGACTGTCATCCTTGTTGTACCATACATCATCTAGTACCAAAAGGAACCGTTTTCGACTCAATGCCTGTTCCAGCTTCTGCTCTAGGGTGTTAAGACTATTGAACTGAGGGCAAGAGTTCCCTGTAGCCTCTTCAAGCATCTTACTGAAAATCTTATCCACATTAAAATTCCTAGAAACATGAACCCACATGATAAGGTCGAAATGGCCAGCCTCTTTCTCTTGCCTGCCCCTTTTCTCATGGGCACAAACATACTGTGCAAGGGTAGATTTCCCGGACCCAGGAATGCCATGGATGCCAATGATGGAATGGGATAATGCACGACTGGGTTCATGTTGACCATCATTTTCTGTCTCATGAAGCAATACTAAGATCTTATCACGATCTTCATCTCGGCCAATTACTACAAATGGAGGAGATGCAGTAGTGACTGCAATACGTGAATCGTCAGAAACAGTTTGTCTCTTGTTGATATTACTGTGGCCTGGCAAATTCAGAAGCTGCAAAATTTTGTGTCCATCGTTGATAATATTTTCTATCTTCTTTAGGATTTTCTTCAACTCCAATTTTGACATATTAGGAGGAGGAGCATCTGAAGGCTGTAAAACAAAATTAGCAGGTCAGGTTTTTATGGTATTTTACAGGAACTCATCAATCATTCATCACCACCCCCCTCACATAAAAGGACTGACATAACTTGCGTAAATCTATCTATTATATTATTAAAGGAATAGAAAAAGGAGCCTCCACGTTCGCTCTCATGGCCTAGAAATTCTCACGTTAATCGGAGAAAAAGAAAAAGCAGAGTCCATATAGAAATACATTTAGAAATAGCTGAAATTTGGAATTAAAAATTAAGGAACATTAGAAGAGGAGACTAGAGTCCATATAGAAATACAATTTAGAAATAGTTGAAATTCGGAATTAAAAAATAAGAAATATTAGAAGAGGAGACTAGAGTCCATATAGAAATACAATTAGGAAATAACTGAAAGTCGGAATTAAAAATAAGGAATATTAGAAGTAGAGTATAGAGTTCATATAGAAATACAATTAGGAAATAGCTGAAATTCGGAATTAAAAAATAAGGAATATTAAAAGAGGATACTAGAGTCCATATAGAAATACAATTAGGAAATAGCTGTAATTCGGAATTAAAAAATAAGGAATATTAAAAGAGAAGACTAGAGTCCATATAGAAATACAATTAGAAAATAACTGAAATTCGGAATTAAAAAATAAGGAATATTAGAAGTAAAGTATAGAGTCCATATAGAAATACAATGAAGAAAAAAAGGAAATTTGGAATTAAAAAATAAGGAATATTAGAAGTAGAGTATAGAGTCCATACATGAATTTGAAACTAACTAAAATTCGGAATAAATGTGATAAAATTAAAAGTAGAGTTTAGAGTCCGTATAAAAATACAATTTACAAATAACTAAAATTCGAAATTAAGAAAAACATGGGAAGAAGAGTTTAAAGTCAATATAGGAATACAATTTAGAAGTAACTGAAATTTGAAATTAAAAATTAAAGAATATTGAAAGATGAGTTTAGAGTCCACATAGAAATACAATTAGAAATAATAAAAATTTAGAATTAAAAAAAAATAAAAGACGAGTCTAGAGTCCATAAAGGAATATATATAATTTATAGATAACTAAAATTTGATAGTAAAAATAATTAATAACTAACACGTATATAAAATACAATATGAATATTACACATTAGTAGTTTCGTAAAGTTATTGCAAAATTTAAAATTATGTTGTCATTGTAATATATTTTAATAATATAATGAGAAAACATATATGCTATTATATGAGAGAAAATATAATGATGCTAGCCGCGCAATCTGCGCGGGCCTCCATGCTAGTTATATAATTAAAGGAATAGAAAAAGGAGCCTCCACGTTCGCTCTCATGGCCTGGAAATTCTCACATTAATCGGAGAAAAAGAAGAAAAAGAAAAAGCAAAGTCCATATAGAAATACAATTTAAAAATAGTGAAATTCGGAATTAAAAAATAAGGAATATTAGAAGAGGAGACTAGAGTCCATATAGAAATACAATTAGGAAATAACTGAAATTCGGAATTAAAATATAAGGAATATTATAAGAGGAGACTAGAGTCCATATAGAAATACAATTAGGAAATAACTGAAATTCGGAATTAAAATATAAGGAATATTAGAAAAGGAGACTAGAGTCTATATAGAAATACAATTAGGAAATAACTGAAATTCGGAATTAAAAATAAGGAATATTAGAAGTAGAGTATATAGAGTCTATATAGAAATACAATTAGGAAATAACTGAAATTCGGAATTAAAAATAAGGAATATTAGAAGTAGAGTATATAGTTCATATAGAAGCCTCCACGTTCGCTCTCATGGCCTAGAAATTCTCACATTAATCGGAGAAAAAGAAGAAAAAGAAAAAGCAAAGTCCATATAGAAATACAATTTAAAAATAGTGAAATTCGGAATTAAAAAATAAGGAATATTAGAAGAGGAGACTAGAGTCCATATAGAAATACAATTAGGAAATAACTGAAATTCGGAATTAAAATATAAGGAATATTATAAGAGGAGACTAGAGTCCATATAGAAATACAATTAGGAAATAACTGAAATTCGGAATTAAAATATAAGGAATATTAGAAAAGGAGACTAGAGTCTATATAGAAATACAATTAGGAAATAACTGAAATTCGGAATTAAAAATAAGGAATATTAGAAGTAGAGTATATAGTTCATATAGAAATACAATTAGGAAATGAAAGAAATTTGGAGTTAAAAATAAGGAATATTAGAAATAGAGTATAGAGTCCATATAGAAATACAATTAAGAAAAAAAAATAGAAATTCGGAATTAAAAAATAAGGATTATTAGAAGTAGAGTATAGAGTTCATATAGAAATTTAAAACTAACTTAAATTTGGAATAAACATAATAAAATAAAAGTAGAGTTTAGAGTCCGTATAAAAATACAATTTACAAATAACTATAAAATTCAAAATTAAGAAAAACATGGGAAGAAGAGTTTAAGGTCAATATAGGAATACATATATAGGAATACAATTTAAAAGTAACTGAAATTCGAAATTAAAAATTAAAGAATATTGAAAGATGAGTTTCGAGTCCACATAGAAATACAATTAGAAATAATAAAAATTCAGAAATAAAAATAAATAATATTGGAAGAAGAGCCTAAAGTCTATATAGAAATACAATTTACAGAAAATTCGAAATTAAAAAAAGAAATATTAAAAGACGAGTCTAGAGTCTATATAGGAATATATATAATTTACAAATAACTAAAATTTGATATTAAAAATAATTAATAACTAACACGTATATAAAATATAATATAAAAATTCAGAAATAAAAATAAATAATATAAAAAAATATAATAATGCTAACCGCGCAATTTGCGCGGGCCACCATGCTAGTTTATATAAAAAGATAAGGATTCGTTGAAGAAAATAGAACTTCCGCAGTTCCCTCCAAGAACGACTGCTAAAATGCATTGTGCATTAGGTCTTTGGTACCCTATCTCCTTCAAGTTGAGTCTCCAGTGATGGATTGTTACAGATAGCTTGAATTTGTACATATTTTTTTCCTAGGAAGTTGGTATCTCCGGTGGCGGTGGTTGCAGGAAACAAGAACACAGTGAGGCGACGTGCACTAGTGGCAAGCTACTCTGCAGCAGCCACAGATATTGATACAAGCATGCATAGATGTACTGAAGAGGAATATTGTTTTGCTGCACCAATTGTATGTTTTAGTTTGACAGAAAGGAAACCTGCACTGGAAAAGAATATCCTGTTTTGTATATTTAATGTTATGATTCAGTTCAACAAAATTCTTTTTTCTTTCTGATTACCCTGTGTGAAAGAAAAAAAAAGACTCATTCCAGTGAATACTACAAAGGAAATCTATAAGTTCAGTTATACTAAGAATGTTGTGTGTTCTAGGAGTCACCCTTTGGAGTTATAGCACATAGGTTCAGAGTTCTTATAGGCGCAGTACAATTATGGATGAATTTGTCATATCAACAAAATACTGTAGCCCTTGCAAGGAAATCTTTATCGAACAGAATATGAAAAGATTTCTGGTGTTGAGTAAATTACAAAGAGATTTTTTACTGTCGTTGAGACTGTGCCGTACTAAATCGTGACCGTTGATCTGACATCATCCAACAGTAAAAAAAACGTCGGTACCTCATGGTACCGCACCTTCCCAATGGAGTGGTACCGTGGGTGGGGGGTAGTTTTGTACTTTCGCGTTGTATCGGCATCTCTTCCTTCTCTGTTCGCGGGAGAAAACGAATCGCTGGGCAGGAGCAGCAAGAGAAACGACGATGGTCCAGTTCAGGCCGTCAGGAGCAGCAAGAGAAACGACGATGGCTGGTCTGCGCCAGAGACGCAGGAAGAACGGAGTCCACAGCAGCAGCGGGGTGGAAGCGACGCCGGAGTCTTCGAGGTGGATGCGACGACGGGATGCGCTGGTCTTGATGCGACGGCGGCCGCGGCGGCCTCGATGCGACGGGATGCCCCGGTCTTGATGCGACGCGCGGCCGCGGCGGCCTCGATGCAACGTCAGCTGCGGCGGCCTCGATGTGACATCAGCCGCGGCGGACTAGCTGCGATGCGACGGCGGCCGCGGCGGATTCGATGCGGCACGGAGATGCTATTGGCTGAGAGGCTGAGATGGGTGGTGATTAGCGCCGCCCTAAATTTGTTTAGTCCGATCGTACCCTTTCTAAATCAACGGTTAGATTAGATCGGTACCTCATGGTACCTCGTACCTTATAATACCTCATGGTATCTCCTCAAGGATGAGAAAAATGCTCAATTACAAAAGGGTTTCCTTTCCAGGGTGTAAAAGATTACAAAGCTTTAGTATTATGATACAACCAACAGTTAGATAAGAAATAGAAGAGCAATAATAGCAGGCAAAACATATTGGCATATTATGACAACAAAGTTCACCTTCAGACTTCAGAGGGTCTCAAGCAGGACAGTAATACCTGGTTTTTTATGCGGACGCTCTTCGGTAGGGCAGACTGGAGCATCTACACCAAATTCCTCCTACGAGGAGGCCTGCCGTTTGACTCCAAATTGTCATCAGGCTGAGATGAGATCTGCCTTTCAAGACGGTGATACTCAATATCATCCAAGATGTCTTCAGCTTCATAGACAGCCGACCTAAGCTGCTGCAACCATTCCTCCAAACGGCCCCTGTGAGGACTCTCCTCAACTGCTTCCAGCACTAGTTCCAGCTGTAGAACTTTAGTCTGAAGTTGTTTCAGCTTCTCTGATCCATGAAAGCCGAGGTAGGAGAAGCCTTTGTTGAGGATCTTGGTGATGATCGGTGAGACGACCCAACCTACAGCAGATATGCCCCAGCCAACTGCG
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CDS seq | ATGCTCCAGTCTGCCCTACCGAAGAGCGTCCGCATAAAAAACCAGGTATTACTGTCCTGCTTGAGACCCTCTGAATTGAAGAAAATCCTAAAGAAGATAGAAAATATTATCAACGATGGACACAAAATTTTGCAGCTTCTGAATTTGCCAGGCCACAGTAATATCAACAAGAGACAAACTGTTTCTGACGATTCACGTATTGCAGTCACTACTGCATCTCCTCCATTTGTAGTAATTGGCCGAGATGAAGATCGTGATAAGATCTTAGTATTGCTTCATGAGACAGAAAATGATGGTCAACATGAACCCAGTCGTGCATTATCCCATTCCATCATTGGCATCCATGGCATTCCTGGGTCCGGGAAATCTACCCTTGCACAGTATGTTTGTGCCCATGAGAAAAGGGGCAGGCAAGAGAAAGAGGCTGGCCATTTCGACCTTATCATGTGGGTTCATGTTTCTAGGAATTTTAATGTGGATAAGATTTTCAGTAAGATGCTTGAAGAGGCTACAGGGAACTCTTGCCCTCAGTTCAATAGTCTTAACACCCTAGAGCAGAAGCTGGAACAGGCATTGAGTCGAAAACGGTTCCTTTTGGTACTAGATGATGTATGGTACAACAAGGATGACAGTCAGGAGGAGCTACAAAAGATTCTTTTTCCACTTAAGGTTGGGGCTTTAGGAAGTAAGATCCTACTAACTAGTCGAACTAGAGATGCATTATTAGCTTTGGGTGCTGCAAAATGTATTCCGATATCTGAATTGGATGACACTGTGTTCCTTGAACTTTTCATGCACTATGCTCTCGACAGTGCAGGCATAGATGAACGCGATCGGATGATATTCAGAGCTATAGGATCTGACATTGCAAAAAAGCTGAAGAGATCACCTCTGGCAGCCAGAACAGTTGGAGGGCAACTACACATGAGACCAACAATTGACTTTTGGCAAGATGCTCGAAATCAGAACCTCTTGAATGAGACAATGGGAGCTCTATGGTGGAGCTACCAGCACCTTGATCAGCAGGTAAGACGGTGCTTTGCTTACTGCAGTATTTTCCCCAGAAGACATCGGCTGGAACGCCATGAGTTAATTAACTTGTGGGTGGCAGAAGGGTTTATAACGACTACTGAAGTAGGATTAGAAATGGAGGCTGTTGGTAGAAAGTACTTTGAGGAATTGGTATCAGCCTCATTTCTGCAACTAGGAGAAAAACAAGCAGAAAGGTTTGGTGCCTCCGAATACTTCACGGTTCATGATCTGCTTCACGATTTAGCAGAGAAGGTTGCTAGAAATGATTGCTTCAAAGTTGAGAATGGCTGGACAGGAGATCTTCCTGGAGATGTTCGCCACCTTTATATCGAGAGTTATAATAAAACGATGATTACTGAAAAGGTTTTGAAAATGGGAAATTTACGCACTCTGATTATTTATAGTGGCAATACAGAAATACCAACTGAAGAAAAGATATTTGAAAGAATGTTCATGAGGCTGAGGAAGTTGCGGGTACTGAGCGTTAAAATCATCACAGGATCGCATGTGTTCTCATTCCCAGAATCTATTGGTCAACTGAGGCATCTACGCCATCTTTGTTTTCGGACAACCTTGATCAGACAAGTTTTACCAAACACAATTGCCAAGCTTCGCTATATGCATGTGCTAGATTTTGGTGTATGTGGAGATTTAGTGTTTCCCTCTGGCGAAGACATGAGTAATCTCATCAACTTGCAGCATATAATCGCCACGGCTGATCTGAATTGTCCAAACATCGGCATGCTAACGTCACTGCAAACATTACCATTGTTCCCAGTAAAGAAGGAACCAGGGTATGAATTACAGCAGCTGAGACACCTAAACAAGCTTCGTGGCAAGCTACATATCCACGGTCTTGGAAACGTTGGGAGCAAGGAGGAAGCTCTTGAAGCCAAATTAGATGGCAAGGAACGCCTGAAAGAACTGGTACTTGTCTGGGATGATGAGAGCTGCAGTCCAGAGGTTGAGGCAGAGGTGCTTGAGGGCCTTTGCCCACCATTGGAGCTTGAAAGACTAGAAATAACAGATTATCACGGTTCAAGCTACCCAGATTGGATGATCGGAGGTCACAAAGGCCCAAAGTACCTGCGCGAACTTGAGCTCAGTGGATGCAGCCGACTGGGACCTGCCCCTGAACTCTTTGAGTTTTTCATTCATCTCCGTTCACTCTGGCTTTGGAAAAGCAGCTGGAACTTCTTGCCAGATAATCTGGAGCAACTCATGTCACTCCATGAACTGAAGATGTATTTTTGCTTGAACATTCAGTCGCTTCCAAAGCTGCCCCGATCTCTTGAGGAGTTTGGATTGGGGGCCTGCGATGACGAGTTCATGAGGTCTTGCAAAACAATTGGGCATCCAAACTGGCACAAGATCCAGCATATTCCTAGAGTAACAATTGCTTTGGAATCTACTCATTCTCCCCATGGTAGCAGCAGCAGCAGCAGCATTCCCGTTTTGTATTTGAGTGGCTAA
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Protein seq | MLQSALPKSVRIKNQVLLSCLRPSELKKILKKIENIINDGHKILQLLNLPGHSNINKRQTVSDDSRIAVTTASPPFVVIGRDEDRDKILVLLHETENDGQHEPSRALSHSIIGIHGIPGSGKSTLAQYVCAHEKRGRQEKEAGHFDLIMWVHVSRNFNVDKIFSKMLEEATGNSCPQFNSLNTLEQKLEQALSRKRFLLVLDDVWYNKDDSQEELQKILFPLKVGALGSKILLTSRTRDALLALGAAKCIPISELDDTVFLELFMHYALDSAGIDERDRMIFRAIGSDIAKKLKRSPLAARTVGGQLHMRPTIDFWQDARNQNLLNETMGALWWSYQHLDQQVRRCFAYCSIFPRRHRLERHELINLWVAEGFITTTEVGLEMEAVGRKYFEELVSASFLQLGEKQAERFGASEYFTVHDLLHDLAEKVARNDCFKVENGWTGDLPGDVRHLYIESYNKTMITEKVLKMGNLRTLIIYSGNTEIPTEEKIFERMFMRLRKLRVLSVKIITGSHVFSFPESIGQLRHLRHLCFRTTLIRQVLPNTIAKLRYMHVLDFGVCGDLVFPSGEDMSNLINLQHIIATADLNCPNIGMLTSLQTLPLFPVKKEPGYELQQLRHLNKLRGKLHIHGLGNVGSKEEALEAKLDGKERLKELVLVWDDESCSPEVEAEVLEGLCPPLELERLEITDYHGSSYPDWMIGGHKGPKYLRELELSGCSRLGPAPELFEFFIHLRSLWLWKSSWNFLPDNLEQLMSLHELKMYFCLNIQSLPKLPRSLEEFGLGACDDEFMRSCKTIGHPNWHKIQHIPRVTIALESTHSPHGSSSSSSIPVLYLSG |
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Function | Putative disease resistance protein RGA4 [UniProtKB/Swiss-Prot:Q7XA39] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
Os11g0668100 | Os11t0668100-00 | Chr11 | 26953151 | 26960443 | - | irgsp1_rep | ||
CDS seq | ATGCTCCAGTCTGCCCTACCGAAGAGCGTCCGCATAAAAAACCAGGTATTACTGTCCTGCTTGAGACCCTCTGAATTGAAGAAAATCCTAAAGAAGATAGAAAATATTATCAACGATGGACACAAAATTTTGCAGCTTCTGAATTTGCCAGGCCACAGTAATATCAACAAGAGACAAACTGTTTCTGACGATTCACGTATTGCAGTCACTACTGCATCTCCTCCATTTGTAGTAATTGGCCGAGATGAAGATCGTGATAAGATCTTAGTATTGCTTCATGAGACAGAAAATGATGGTCAACATGAACCCAGTCGTGCATTATCCCATTCCATCATTGGCATCCATGGCATTCCTGGGTCCGGGAAATCTACCCTTGCACAGTATGTTTGTGCCCATGAGAAAAGGGGCAGGCAAGAGAAAGAGGCTGGCCATTTCGACCTTATCATGTGGGTTCATGTTTCTAGGAATTTTAATGTGGATAAGATTTTCAGTAAGATGCTTGAAGAGGCTACAGGGAACTCTTGCCCTCAGTTCAATAGTCTTAACACCCTAGAGCAGAAGCTGGAACAGGCATTGAGTCGAAAACGGTTCCTTTTGGTACTAGATGATGTATGGTACAACAAGGATGACAGTCAGGAGGAGCTACAAAAGATTCTTTTTCCACTTAAGGTTGGGGCTTTAGGAAGTAAGATCCTACTAACTAGTCGAACTAGAGATGCATTATTAGCTTTGGGTGCTGCAAAATGTATTCCGATATCTGAATTGGATGACACTGTGTTCCTTGAACTTTTCATGCACTATGCTCTCGACAGTGCAGGCATAGATGAACGCGATCGGATGATATTCAGAGCTATAGGATCTGACATTGCAAAAAAGCTGAAGAGATCACCTCTGGCAGCCAGAACAGTTGGAGGGCAACTACACATGAGACCAACAATTGACTTTTGGCAAGATGCTCGAAATCAGAACCTCTTGAATGAGACAATGGGAGCTCTATGGTGGAGCTACCAGCACCTTGATCAGCAGGTAAGACGGTGCTTTGCTTACTGCAGTATTTTCCCCAGAAGACATCGGCTGGAACGCCATGAGTTAATTAACTTGTGGGTGGCAGAAGGGTTTATAACGACTACTGAAGTAGGATTAGAAATGGAGGCTGTTGGTAGAAAGTACTTTGAGGAATTGGTATCAGCCTCATTTCTGCAACTAGGAGAAAAACAAGCAGAAAGGTTTGGTGCCTCCGAATACTTCACGGTTCATGATCTGCTTCACGATTTAGCAGAGAAGGTTGCTAGAAATGATTGCTTCAAAGTTGAGAATGGCTGGACAGGAGATCTTCCTGGAGATGTTCGCCACCTTTATATCGAGAGTTATAATAAAACGATGATTACTGAAAAGGTTTTGAAAATGGGAAATTTACGCACTCTGATTATTTATAGTGGCAATACAGAAATACCAACTGAAGAAAAGATATTTGAAAGAATGTTCATGAGGCTGAGGAAGTTGCGGGTACTGAGCGTTAAAATCATCACAGGATCGCATGTGTTCTCATTCCCAGAATCTATTGGTCAACTGAGGCATCTACGCCATCTTTGTTTTCGGACAACCTTGATCAGACAAGTTTTACCAAACACAATTGCCAAGCTTCGCTATATGCATGTGCTAGATTTTGGTGTATGTGGAGATTTAGTGTTTCCCTCTGGCGAAGACATGAGTAATCTCATCAACTTGCAGCATATAATCGCCACGGCTGATCTGAATTGTCCAAACATCGGCATGCTAACGTCACTGCAAACATTACCATTGTTCCCAGTAAAGAAGGAACCAGGGTATGAATTACAGCAGCTGAGACACCTAAACAAGCTTCGTGGCAAGCTACATATCCACGGTCTTGGAAACGTTGGGAGCAAGGAGGAAGCTCTTGAAGCCAAATTAGATGGCAAGGAACGCCTGAAAGAACTGGTACTTGTCTGGGATGATGAGAGCTGCAGTCCAGAGGTTGAGGCAGAGGTGCTTGAGGGCCTTTGCCCACCATTGGAGCTTGAAAGACTAGAAATAACAGATTATCACGGTTCAAGCTACCCAGATTGGATGATCGGAGGTCACAAAGGCCCAAAGTACCTGCGCGAACTTGAGCTCAGTGGATGCAGCCGACTGGGACCTGCCCCTGAACTCTTTGAGTTTTTCATTCATCTCCGTTCACTCTGGCTTTGGAAAAGCAGCTGGAACTTCTTGCCAGATAATCTGGAGCAACTCATGTCACTCCATGAACTGAAGATGTATTTTTGCTTGAACATTCAGTCGCTTCCAAAGCTGCCCCGATCTCTTGAGGAGTTTGGATTGGGGGCCTGCGATGACGAGTTCATGAGGTCTTGCAAAACAATTGGGCATCCAAACTGGCACAAGATCCAGCATATTCCTAGAGTAACAATTGCTTTGGAATCTACTCATTCTCCCCATGGTAGCAGCAGCAGCAGCAGCATTCCCGTTTTGTATTTGAGTGGCTAA
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Protein seq | MLQSALPKSVRIKNQVLLSCLRPSELKKILKKIENIINDGHKILQLLNLPGHSNINKRQTVSDDSRIAVTTASPPFVVIGRDEDRDKILVLLHETENDGQHEPSRALSHSIIGIHGIPGSGKSTLAQYVCAHEKRGRQEKEAGHFDLIMWVHVSRNFNVDKIFSKMLEEATGNSCPQFNSLNTLEQKLEQALSRKRFLLVLDDVWYNKDDSQEELQKILFPLKVGALGSKILLTSRTRDALLALGAAKCIPISELDDTVFLELFMHYALDSAGIDERDRMIFRAIGSDIAKKLKRSPLAARTVGGQLHMRPTIDFWQDARNQNLLNETMGALWWSYQHLDQQVRRCFAYCSIFPRRHRLERHELINLWVAEGFITTTEVGLEMEAVGRKYFEELVSASFLQLGEKQAERFGASEYFTVHDLLHDLAEKVARNDCFKVENGWTGDLPGDVRHLYIESYNKTMITEKVLKMGNLRTLIIYSGNTEIPTEEKIFERMFMRLRKLRVLSVKIITGSHVFSFPESIGQLRHLRHLCFRTTLIRQVLPNTIAKLRYMHVLDFGVCGDLVFPSGEDMSNLINLQHIIATADLNCPNIGMLTSLQTLPLFPVKKEPGYELQQLRHLNKLRGKLHIHGLGNVGSKEEALEAKLDGKERLKELVLVWDDESCSPEVEAEVLEGLCPPLELERLEITDYHGSSYPDWMIGGHKGPKYLRELELSGCSRLGPAPELFEFFIHLRSLWLWKSSWNFLPDNLEQLMSLHELKMYFCLNIQSLPKLPRSLEEFGLGACDDEFMRSCKTIGHPNWHKIQHIPRVTIALESTHSPHGSSSSSSIPVLYLSG
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | None | None | None |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0668100 | RBH | 0.545508 | 1.187026 | 0.660127 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g44580 | RBH | 0.270107 | 0.700377 | 0.157062 |
Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0023060 | RBH | 0.721716 | 4.629389 | 1.179042 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0023140 | RBH | 0.000000 | 0.000000 | 1.017373 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0022770 | RBH | 0.979597 | 4.284066 | 2.042390 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0022460 | RBH | 0.124196 | 0.081978 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0022720 | RBH | 2.844949 | 2.401514 | 2.983024 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0405000 | RBH | 2.546412 | 9.46714 | 0.3946455 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0023620 | RBH | 0.393959 | 0.167419 | 0.935478 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0430200 | SBH | 14.200319 | 23.9624835 | 0.1261395 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0023250 | RBH | 0.086567 | 0.000000 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0023370 | RBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0022960 | RBH | 0.000000 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0022690 | RBH | 0.796213 | 0.0 | 0.076279 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0022580 | RBH | 0.015212 | 0.477175 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G022940 | RBH | 0.684989 | 0.867905 | 0.231093 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0023370 | RBH | 1.251961 | 12.032497 | 1.134784 |