Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os10g0439700 | OGI:10050670 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr10:15791484-15792467 | ||||||||
| Gene Symbol | CYP71Z3, Oscyp71Z3 | ||||||||||
| DNA seq | TTAGTTGTTGGATGCTGTTGTGAGGGGGTTGGGAGTGAGGAGGCAATTGCTTACAAATAAAAGCATGACGATGAGTTCCATGGTAATTGGGATTGGTGTGTCCCCCTCCTTCTGAAGCCTGAGCAGGACGTCGAGGAAGCACTCGTTTGTGGGCCCCGCCTCGCCATCGCCGCTCCTGTCCGTCGTCATCTCCTCTCGTTCTTGTATGATCTGCTCCAAGATAAGCTCCATCTTCTTCCGGCTGGCGAGCGCCCTGCGCGGCGCCGTGCCGAGCATCCGCGCGAGCCTGCTCGACGGGAAGAGGTCGGCGACGGTGAGCCACGACGTCTGGCTCAGGGCGGTGCAGAGCGCGCCGAGGAACTCGTCGCGGTGCTTGCTCCGGCCACCGACGCAGCACCTCACCATGATGTCGTTGACGAGCCTGGCGACCCTCTCGCTGAGGTTCACGGCGACCTCGCCGCCGCCGGCGGCGGACGCGGCGAGGTCCCGGACCAGGCGCGCCACCTCCTCCTCGCGGATCCGCCGGAATGACCTCACCCGCGCGGCGGTCAGCAGCTGCTGCGTGCAGAGCATCTTGAGGTGGCGCCACCGCTCGCCGTAGGGGGCGAAGGCGAGGTCGCCGCCGCCGAAGGTGATGGCCCCGAGCGTGGTGGTGATGAACCGGTCGGCGAACCTGGCGTCCTGGTTCTTGAGGACCTCCTCCGCCGCCTCCGTCGATGACACGACCACCGCGGGCACCTCGCCGAGCCACACCTGCATGAGCGGGCCGTGCTTCTCGGCTAGCGCCCGCATCGAGCGGTGGATGCTGGGGCTCCTCATCACGAGGTGGTGGAGGCTGCCGATCACCGGCAGCGTCCATGGCCCCGGCGGCAGGTTCAGCCTCGGCTTGTTGGTTGCACGATATACCAGCTTGGAGATGGTCACGATGGAGACGACGGACACGGCCAGAGCCAGCAGCAGCAGCTGCAGCAGCTTGTCGTCCAT
More
|
||||||||||
| CDS seq | ATGGACGACAAGCTGCTGCAGCTGCTGCTGCTGGCTCTGGCCGTGTCCGTCGTCTCCATCGTGACCATCTCCAAGCTGGTATATCGTGCAACCAACAAGCCGAGGCTGAACCTGCCGCCGGGGCCATGGACGCTGCCGGTGATCGGCAGCCTCCACCACCTCGTGATGAGGAGCCCCAGCATCCACCGCTCGATGCGGGCGCTAGCCGAGAAGCACGGCCCGCTCATGCAGGTGTGGCTCGGCGAGGTGCCCGCGGTGGTCGTGTCATCGACGGAGGCGGCGGAGGAGGTCCTCAAGAACCAGGACGCCAGGTTCGCCGACCGGTTCATCACCACCACGCTCGGGGCCATCACCTTCGGCGGCGGCGACCTCGCCTTCGCCCCCTACGGCGAGCGGTGGCGCCACCTCAAGATGCTCTGCACGCAGCAGCTGCTGACCGCCGCGCGGGTGAGGTCATTCCGGCGGATCCGCGAGGAGGAGGTGGCGCGCCTGGTCCGGGACCTCGCCGCGTCCGCCGCCGGCGGCGGCGAGGTCGCCGTGAACCTCAGCGAGAGGGTCGCCAGGCTCGTCAACGACATCATGGTGAGGTGCTGCGTCGGTGGCCGGAGCAAGCACCGCGACGAGTTCCTCGGCGCGCTCTGCACCGCCCTGAGCCAGACGTCGTGGCTCACCGTCGCCGACCTCTTCCCGTCGAGCAGGCTCGCGCGGATGCTCGGCACGGCGCCGCGCAGGGCGCTCGCCAGCCGGAAGAAGATGGAGCTTATCTTGGAGCAGATCATACAAGAACGAGAGGAGATGACGACGGACAGGAGCGGCGATGGCGAGGCGGGGCCCACAAACGAGTGCTTCCTCGACGTCCTGCTCAGGCTTCAGAAGGAGGGGGACACACCAATCCCAATTACCATGGAACTCATCGTCATGCTTTTATTTGTAAGCAATTGCCTCCTCACTCCCAACCCCCTCACAACAGCATCCAACAACTAA
More
|
||||||||||
| Protein seq | MDDKLLQLLLLALAVSVVSIVTISKLVYRATNKPRLNLPPGPWTLPVIGSLHHLVMRSPSIHRSMRALAEKHGPLMQVWLGEVPAVVVSSTEAAEEVLKNQDARFADRFITTTLGAITFGGGDLAFAPYGERWRHLKMLCTQQLLTAARVRSFRRIREEEVARLVRDLAASAAGGGEVAVNLSERVARLVNDIMVRCCVGGRSKHRDEFLGALCTALSQTSWLTVADLFPSSRLARMLGTAPRRALASRKKMELILEQIIQEREEMTTDRSGDGEAGPTNECFLDVLLRLQKEGDTPIPITMELIVMLLFVSNCLLTPNPLTTASNN |
||||||||||
| Function | Ent-cassadiene hydroxylase [UniProtKB/Swiss-Prot:Q6YV88] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os10g0439700 | Os10t0439700-00 | Chr10 | 15791484 | 15792467 | - | irgsp1_rep | ||
| CDS seq | ATGGACGACAAGCTGCTGCAGCTGCTGCTGCTGGCTCTGGCCGTGTCCGTCGTCTCCATCGTGACCATCTCCAAGCTGGTATATCGTGCAACCAACAAGCCGAGGCTGAACCTGCCGCCGGGGCCATGGACGCTGCCGGTGATCGGCAGCCTCCACCACCTCGTGATGAGGAGCCCCAGCATCCACCGCTCGATGCGGGCGCTAGCCGAGAAGCACGGCCCGCTCATGCAGGTGTGGCTCGGCGAGGTGCCCGCGGTGGTCGTGTCATCGACGGAGGCGGCGGAGGAGGTCCTCAAGAACCAGGACGCCAGGTTCGCCGACCGGTTCATCACCACCACGCTCGGGGCCATCACCTTCGGCGGCGGCGACCTCGCCTTCGCCCCCTACGGCGAGCGGTGGCGCCACCTCAAGATGCTCTGCACGCAGCAGCTGCTGACCGCCGCGCGGGTGAGGTCATTCCGGCGGATCCGCGAGGAGGAGGTGGCGCGCCTGGTCCGGGACCTCGCCGCGTCCGCCGCCGGCGGCGGCGAGGTCGCCGTGAACCTCAGCGAGAGGGTCGCCAGGCTCGTCAACGACATCATGGTGAGGTGCTGCGTCGGTGGCCGGAGCAAGCACCGCGACGAGTTCCTCGGCGCGCTCTGCACCGCCCTGAGCCAGACGTCGTGGCTCACCGTCGCCGACCTCTTCCCGTCGAGCAGGCTCGCGCGGATGCTCGGCACGGCGCCGCGCAGGGCGCTCGCCAGCCGGAAGAAGATGGAGCTTATCTTGGAGCAGATCATACAAGAACGAGAGGAGATGACGACGGACAGGAGCGGCGATGGCGAGGCGGGGCCCACAAACGAGTGCTTCCTCGACGTCCTGCTCAGGCTTCAGAAGGAGGGGGACACACCAATCCCAATTACCATGGAACTCATCGTCATGCTTTTATTTGTAAGCAATTGCCTCCTCACTCCCAACCCCCTCACAACAGCATCCAACAACTAA
More
|
|||||||
| Protein seq | MDDKLLQLLLLALAVSVVSIVTISKLVYRATNKPRLNLPPGPWTLPVIGSLHHLVMRSPSIHRSMRALAEKHGPLMQVWLGEVPAVVVSSTEAAEEVLKNQDARFADRFITTTLGAITFGGGDLAFAPYGERWRHLKMLCTQQLLTAARVRSFRRIREEEVARLVRDLAASAAGGGEVAVNLSERVARLVNDIMVRCCVGGRSKHRDEFLGALCTALSQTSWLTVADLFPSSRLARMLGTAPRRALASRKKMELILEQIIQEREEMTTDRSGDGEAGPTNECFLDVLLRLQKEGDTPIPITMELIVMLLFVSNCLLTPNPLTTASNN
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0439700 | RBH | 0.0 | 0.0 | 0.909630 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g30380 | RBH | 0.0 | 0.0 | 0.146851 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0012260 | RBH | 0.339838 | 0.565423 | 0.741895 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0012470 | RBH | 0.0 | 0.0 | 0.058350 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0012170 | RBH | 2.684195 | 8.254560 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0012430 | SBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0012180 | SBH | 0.0 | 0.0 | 0.605906 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0263400 | SBH | 0.6215445 | 0.992475 | 1.5297265 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0012210 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0283600 | SBH | 1.227944 | 0.8644665 | 4.178055 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0011960 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0011920 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0012340 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0011930 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0012430 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G012300 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0012240 | SBH | 0.0 | 0.0 | 0.0 |
