Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os10g0116600 | OGI:10012470 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr10:1067078-1068007 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCAATTAAGAAACTTCCGGGATCTAATAATGCCTTGCAGACGTTCTGCTATATCTGTCATCTCGGGCCTTTGGTCCACATTATTGTCTAAACACTCTTTGGATATCACAACAAGATTATGGAGATGCTCAATGTCCTTTTCTTCAGCCTCCTTACCAAACAGCATCTTATTTGCTCTTATCTCAGTTAAGTATGTGTCAAGGTAATTTCTGACAAAGCTACTTTCACCACCATAAACAGCTTTCTTACCGGTGATGATTTCAAAGAGCACAAGACCGAAACTGTAGACATCACTCTTGTTAGTTAGCAGACCAGTTTCACGATAAACTGGATCCATATAGTTGTTGTCGCCAATAACATCGTTAGTGTGCTCGGTGACATCTCTTGCAATTAACCTTGATATTCCAAAATCAGATATTTTTGGGTTGAATTGATCGTCCAAAAGTATATTGGCAGGCTTAACGTCACCGTGTTGAATGCTAGTTGAGGTCTTGGAATGCATGTAAGCCAGGCCTTCTGCAGATTCGGCAGCAATGGCCAAACGTTTGTCTAAAGTGAGAGGAACTTTGTTCTCACCGTGAAGGATGTCTTGCAGGCTACCATTCGAAACAAATTCATAGACCAAGATCGGGACATCTACCTCAAGGCAGCAACCTATTAGCCTGACGATGTTCTTATGGATTACTTGAGATTGGATAATAACTTCATTTGCGAATTGGTCCTTCTGCGTCTTGTCAACTTTCATGGACTTCTTTACCGCAACAGGATGCTGTTCATCAAGGAACCCTTTATATACCATACCAAAGGCACCATTTCCAAGAACATGACTATAAGTTTTTGTAATTCGCTTTAGCTCCTCCTTCCTGAATATCTTTATGCTCTTTGCATTTTCCAGTATAGGACCACCATTTCTAATGAAAAATTCCCTCAT
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| CDS seq | ATGAGGGAATTTTTCATTAGAAATGGTGGTCCTATACTGGAAAATGCAAAGAGCATAAAGATATTCAGGAAGGAGGAGCTAAAGCGAATTACAAAAACTTATAGTCATGTTCTTGGAAATGGTGCCTTTGGTATGGTATATAAAGGGTTCCTTGATGAACAGCATCCTGTTGCGGTAAAGAAGTCCATGAAAGTTGACAAGACGCAGAAGGACCAATTCGCAAATGAAGTTATTATCCAATCTCAAGTAATCCATAAGAACATCGTCAGGCTAATAGGTTGCTGCCTTGAGGTAGATGTCCCGATCTTGGTCTATGAATTTGTTTCGAATGGTAGCCTGCAAGACATCCTTCACGGTGAGAACAAAGTTCCTCTCACTTTAGACAAACGTTTGGCCATTGCTGCCGAATCTGCAGAAGGCCTGGCTTACATGCATTCCAAGACCTCAACTAGCATTCAACACGGTGACGTTAAGCCTGCCAATATACTTTTGGACGATCAATTCAACCCAAAAATATCTGATTTTGGAATATCAAGGTTAATTGCAAGAGATGTCACCGAGCACACTAACGATGTTATTGGCGACAACAACTATATGGATCCAGTTTATCGTGAAACTGGTCTGCTAACTAACAAGAGTGATGTCTACAGTTTCGGTCTTGTGCTCTTTGAAATCATCACCGGTAAGAAAGCTGTTTATGGTGGTGAAAGTAGCTTTGTCAGAAATTACCTTGACACATACTTAACTGAGATAAGAGCAAATAAGATGCTGTTTGGTAAGGAGGCTGAAGAAAAGGACATTGAGCATCTCCATAATCTTGTTGTGATATCCAAAGAGTGTTTAGACAATAATGTGGACCAAAGGCCCGAGATGACAGATATAGCAGAACGTCTGCAAGGCATTATTAGATCCCGGAAGTTTCTTAATTGA
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| Protein seq | MREFFIRNGGPILENAKSIKIFRKEELKRITKTYSHVLGNGAFGMVYKGFLDEQHPVAVKKSMKVDKTQKDQFANEVIIQSQVIHKNIVRLIGCCLEVDVPILVYEFVSNGSLQDILHGENKVPLTLDKRLAIAAESAEGLAYMHSKTSTSIQHGDVKPANILLDDQFNPKISDFGISRLIARDVTEHTNDVIGDNNYMDPVYRETGLLTNKSDVYSFGLVLFEIITGKKAVYGGESSFVRNYLDTYLTEIRANKMLFGKEAEEKDIEHLHNLVVISKECLDNNVDQRPEMTDIAERLQGIIRSRKFLN |
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| Function | Wall-associated receptor kinase 1 [UniProtKB/Swiss-Prot:Q39191] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os10g0116600 | Os10t0116600-00 | Chr10 | 1067078 | 1068007 | - | irgsp1_rep | ||
| CDS seq | ATGAGGGAATTTTTCATTAGAAATGGTGGTCCTATACTGGAAAATGCAAAGAGCATAAAGATATTCAGGAAGGAGGAGCTAAAGCGAATTACAAAAACTTATAGTCATGTTCTTGGAAATGGTGCCTTTGGTATGGTATATAAAGGGTTCCTTGATGAACAGCATCCTGTTGCGGTAAAGAAGTCCATGAAAGTTGACAAGACGCAGAAGGACCAATTCGCAAATGAAGTTATTATCCAATCTCAAGTAATCCATAAGAACATCGTCAGGCTAATAGGTTGCTGCCTTGAGGTAGATGTCCCGATCTTGGTCTATGAATTTGTTTCGAATGGTAGCCTGCAAGACATCCTTCACGGTGAGAACAAAGTTCCTCTCACTTTAGACAAACGTTTGGCCATTGCTGCCGAATCTGCAGAAGGCCTGGCTTACATGCATTCCAAGACCTCAACTAGCATTCAACACGGTGACGTTAAGCCTGCCAATATACTTTTGGACGATCAATTCAACCCAAAAATATCTGATTTTGGAATATCAAGGTTAATTGCAAGAGATGTCACCGAGCACACTAACGATGTTATTGGCGACAACAACTATATGGATCCAGTTTATCGTGAAACTGGTCTGCTAACTAACAAGAGTGATGTCTACAGTTTCGGTCTTGTGCTCTTTGAAATCATCACCGGTAAGAAAGCTGTTTATGGTGGTGAAAGTAGCTTTGTCAGAAATTACCTTGACACATACTTAACTGAGATAAGAGCAAATAAGATGCTGTTTGGTAAGGAGGCTGAAGAAAAGGACATTGAGCATCTCCATAATCTTGTTGTGATATCCAAAGAGTGTTTAGACAATAATGTGGACCAAAGGCCCGAGATGACAGATATAGCAGAACGTCTGCAAGGCATTATTAGATCCCGGAAGTTTCTTAATTGA
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| Protein seq | MREFFIRNGGPILENAKSIKIFRKEELKRITKTYSHVLGNGAFGMVYKGFLDEQHPVAVKKSMKVDKTQKDQFANEVIIQSQVIHKNIVRLIGCCLEVDVPILVYEFVSNGSLQDILHGENKVPLTLDKRLAIAAESAEGLAYMHSKTSTSIQHGDVKPANILLDDQFNPKISDFGISRLIARDVTEHTNDVIGDNNYMDPVYRETGLLTNKSDVYSFGLVLFEIITGKKAVYGGESSFVRNYLDTYLTEIRANKMLFGKEAEEKDIEHLHNLVVISKECLDNNVDQRPEMTDIAERLQGIIRSRKFLN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0116600 | RBH | 0.0 | 0.000000 | 0.586391 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g02720 | RBH | 0.0 | 0.071024 | 0.220484 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0000160 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0000160 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0004190 | RBH | 0.0 | 2.878206 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0003160 | RBH | 0.000000 | 0.277881 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0003390 | SBH | 0.0 | 25.566597 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0018100 | SBH | 0.4669615 | 3.219749 | 0.0290525 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0003090 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0019500 | SBH | 0.9207445 | 1.182914 | 0.0044335 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0002900 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0003450 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0002990 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0004210 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0003660 | SBH | 0.394088 | 12.960301 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G003490 | SBH | 0.0 | 2.832500 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0004450 | SBH | 0.0 | 0.0 | 0.0 |
