Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os09g0479500 | OGI:09053710 | 13/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr09:18391869-18397839 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GAAAGCAAATATCAGCCATTGTAATATTTTGATTTGACGTACAGTCCAAACATGACCAGCTACGTAAATTATTTCAGATAAACACCAAATGGTTCAGTTCATTTTGGTGAGTGAATGGTGATAGACTGATGCATCTACAAATATGGGTAGTCCATTTCGGACGCTACACTTCGTCTCGCATAATCATCTTGACCAGAAAATGGTCGGAGCGAAAAAAAAAAGAGCGAGAACGTTATTTGCAATGCTAAATATGGGATAATAACACGATAATTTTCTGAATGTATCAATCTTCTATTTAGTAGTTATCTTCCTGTAAATCGGCATGCAGCAGGTAGCGTGATCTCTTCTTGCAACAATCATCTGGAATTCTTGATGCTACCATCCAGTGGAGGAAACAAGGCGTGGTCGCAGAAAGAAGTTTCTGAGTTGCTCTGACAATGGAGGAGCAGCTTTCAGTATACATGGCCACGGAATGACAAAATGCCACTGGCTCTTCAAGTTACTTCAAAAATTGCAGAGAATCTGACACTGTTCTGTTGTGCCAAGAGAAAGAAAGGATGGTGATGGAGACATAGCTTACCAGAAAGCTTTGCTTCCAAATACTAAATCAGAGTGGAAGTGCAGCACCGATTCAGCTCCAGTGTTTACTTCAGTGAACCAGGTGTACACAAACATTGCAGCAGAGGGAAATGGTTATGCACTGTTGTCAGGTCGAAGTGTCGAACCAGCAACCTAGCTCCGCAAATTGGATTAGATGAAAACCCAGCCTGATCCACCTAAGATGCGCCATTCTGGGTTTGTGTTGGTCATGTTGGATGCTCCAGGCAGATTAGCAAGTCCAGTGAGATCCGTGGACACCCCTGCAATTTATGTACAAAAATGAAGCATACTATGAAGATGCACACGATCTTGGATGCAAAACTCTGGTATCTGTACACTTCGTGTCAATAAAAATGTACTACCTCCGTCCCAAAATATAACAACTTTTGGCTACGAATCTGGACACACAGTTGTCCAGATTCATAGCTAAAAATGTTTATATTTTGGGACGGAGGGAGTATTTGTTATGCTTACTTACAAAGTGAATTCATGATTGCGCACAAAACTACTTGCAGGTGAGTAATTTTCAGTTATAAACAGGTTATGTTTGTAACTGGTTAACATTGTGGAAGACATGCGAAATCTAAGCAATGTATGGGTTGAGAGAGTGATCAAAACTCACCTTGTGTTGACCAGTGGACCTTCGGGATATGGCTTATCTTTCCTGTTCGTAAATTCCTTACAAAATCAGAATGCATCCTGGTAAAATATGCCTCTTTCACTGAACTGAGAAACTCAATACCGACAGGGATGTCACGTAGTTCCATGAGGCTATCGATGTGAAGATAATGCAGGTTGGCCAGAGCTCCCTCCTGTATAAATATTTGCTTCACTTGCTGCAAATCCCACAAGACGGCTTTCTTTAATTTCGGGAACCAGTTTGCAGGAAAGTACAGCCAAGGCCCAGTGTACACCCTTGTAAGACGTAACTCGGTTAAATCCGAGAACTCTGCAAGGCGGGCCACTGGATTCACTGTGAGCTTACACCATGAAAGTTCAATTTGCAGGAGTTTATATCCATGAATAGAGAAAAAGGGAGATTCCAAGGTTCCTTCTGACAACTGGCCTACCAGTTCAAGCTTTTCGAGAGGGTTTGACAATGTGAAATCATCCAGCAAGAGCAGCTCATCTTCATTGCGTGCTCTTATGTTTAATCTTGTGAGATGTTGCATCTTTGATAAAGAGTTGCACAATTGCACACAGTGACTACTCCTTACATAAGTAATGCAGAGGCTCCTCAGCTGGGATAAATTTCCTAGATTTGAAACAAAGGCTTTAGTTGCACGAACCTCATTCAAATAATGCAATTCCTTCAAGTCCCACAAGCCCTCAAATGGCTCCATAGATTCCCAGTTATTCAGACTTTTGTATGTAGCATCTACTAACTTCCAAACAAGCAGATGGCGCAATTTCTTTAGATTTGAAAACCCTCGTGGGAAATTCAACAACTGGGTACGTTCAAGGCTCAATGTTTGTAAATTGCTAAGCTTCGTAACAGATTTTGGGAATTCCTTCACATTGGTGTCGTTGAGACACAAAAACCGAAGGTTAAACAGCTCCCCAACTGAATATGGAATAGTCTCAATAGGCAAGCCTGACAAGTCTAATACATTAAGGTACTTAGATTCTGAGAAAATGAAAGAAGACCATGAAGATAATGCCATGGTGGTGTCAAATGCTATGAAGGTGTGAAGCCTGGATGGATCTATGCTTGATCTAATATCATTGTTGCATCGAAGCACCGAGACACGACGAGAGTCTAATCCCACTTGTGCCACTCCATGAGTGTCATCATAAATTGTACAGAAACTTTCTTTCTTCAATTGGAAAATGGCTAATTCACGCACAATGTCATGCATTCGAAGACACTGAACCCTATCAAAACTGTTACATGCTACAACTTGAAGCATGCTTCGTTGGACAAGCTCTGCTAGGTAACCTTCAGCGACATCTTCTAAGCTGCATGCTCCTTTTTGTTCTATAAATCCTTCACTGATCCACAGTCTAATTAATCTCTTTCTGTGAATCAGATAATCTTCTGGGAACATAGCACAATATAAGAAACAATACTTCAGATGGTTTGGCAGGTGCTTGTAGCTTAGATTTAGAATTTTCTCCACCCGGTTTAAGTTCTCATTATTGTGTACCTCTGAAATAAGTTGATTGTAGAAAAGCCTCCAATCTTTATTATTCTTTGATTTGAAGGACAATAAACTCCCTATTGCCACAAGAGCTAAAGGCAAACCGTCACATTTATCGATAATGTCCATACCACACTGCTCTAATTCTGGAGGGCATATATGATCTTCAATTTTTGGAAATGCTTTCCTACAGAAGAGAAGCCATGCATCATGGTTATCTAGAGGCTCTAAACTGATCTTACAACCATTCTCAGCTATGGAAGCAACTTCCTCAATTCTTGTTGTGATTATTACTCTGCTTCCTAGGCCATTATCAACAAGAACCTCTCTAATCTTTAAAAAATCTGTAGCCAACCAGACATCATCCAATATGATCAAGTACCGCTTTTGATCCAGAATTTTAGTTAATTCCACTTTTAGTTCTGTACTGCTCATATTTTCAGCATCAAACTCTCTGCTTTCTTTTCCACAGAGCTCTTTCAGCATGTTTCGCCAAATATCAAGTACTCTACATGACTGAGAGATAGAAAGCCATGCACGGTAATTGAAATTGGATACTGTTGCTTCTTTTTTGTAGACATTGTTGACAAGAGTGCTTTTCCCAAGGCCACCCATGCCCCAGACAGCAATGATCCGAAGAGAACAATCTTCCAAACACAATGATTCAATCAAGGTTTGTCTATTTTTATCAATTCCTACAAGCTCAGCATCAGTAATTGAATAATCATGTCCAGGTAGATACAACTGTTGTTGTTCAGTGTCATATTTTGTTGCAGGAATACTACCCCCACTCAATATCGGTTGGGTCCAACGTCCTAGTCTTTTAGAAAGCTCCATAAGCTGTCTGTTTATCCTATCTGCTTTAGTAGCAATTTCATCAAGTGAAAATAAAGGTTTAGGTTTCTTGATAATTTTCTTCACATAAGCTCGTGACTCTCTCTCTTTGTTTTTGCCAATAACATACATAAACTCATCCACAACATCTTCCATATCATGCGCCAACCTCCGTACTTGCCTTACCCAAGTTTCTACAACTTCACCTTTGCATCCATTCATGCCAAGTTCCTTCAGAAATGCATTGATAACCTCAAGTTCATCTTTTATCAGTTTCATGTTAACTGGAAGTGCTGTTACTAGCTCAGCTTTCTTTAACTCGGTTTTGTTTGCAAGCAAGGGTTTAGCTAGCTTCAGTGTTTCACCTGCCACAGCTATTCCTATCTTTTTTATGACAAAAAGAACGATAATTTCTGCCATTTCTCTTTGTGCGGTTTGACTTCAGTATTTCAGTGAAGTATAGTTGTAATAATCAAAGATCGATCTTCTGTACCAATCCAATTCTTGTATATCAAATCTATGGGGAAAAAAGAAACTCTTTTATCAAACAGGAAATCCTAACTAATGAGCAAATATGTAGTGGTTAAAGGGCTAATTTATACAATTCACATCTGCTAACAAGATTGTTGCTGAAATACCTGCAGTGTTGCTGATTTTTTTTTAAATGCACCTTATGCTTGGATCAAAGGAACTTGCTGGAGATAAAGATGGATCATTAATAAAGACCGAAGTGGATGGTATCCATAGCCATGTTGCTCCTTTATCTGTCATAGTGATTTACGAAGGGGTGGGAAATGGAGGAATTGTGTCAGTTAAAGATAAAAGTACCGGCAAAACAATTGAACTGTTTTTCAAATTGGGAAAATGATAGTATATTAAAGAAAAGCAACATACTAAATTTCCAAGTTATCTTTTTTTCCCTTAACAAACTAGTGAAGAAATCACATGTAACTGTATCATACTTACATTGTAAATTGGTTAACGTATTTCTCCGAGACAAGTGAAGGAGCTAAAGGTGAAGAGAGCTTGCAACTTTACACATTTCATCAGACTCTCTTCATCATCCTGCTGGTGTGAATAAATATTTAGAGTTCCCAAGTGTGCAGAATGGGAAGGTTGAGGGAAGGCAAAAATACAGAAGCACTACTGCACTAGTGAGGCAGTGGCCTTCTCCTTTTTAAACTCAAAGGCTGGAGAATTTTTCTTCTATTACTATAGAGATACATCATCATTCATCAACACGAAATCTAAGACCAAAGGTCCAGTTGACTTGACTAGTTGACTCCTAGAAAGTAGAAAGTGTCATCCTAATTCCTTAGTTACTCATACACGTTTCCTAAACACATGAGGTTAAATAATTACATAATCATTTTTTTTGGATGAAAATTACACATTCAGTGTGACTCATATTAATTTGAATGGGAACTATACACCCAATGCGGCTCAAATATTTTCAAAGAAATTGCGCAGCCAATGTGGAGACAGATTTATGACTTGGTCCATTCAAATACATGAACTATGACAGCTTTTTGTCTGGCTTAGTTTACAATTTTCGTTTTATAGTCTATTAGTTTTCAAGAAGGCAAAATATCATGGTTGTACATTAACCAATTTGCAGGCCTACTATAAATTCTCACGGAAGCAATATTTTTTGGAGTTCTCCTTTTTAAACTGGTATAGAGGTAGCATGAACAGTGTTAATGTGTTATCCAGTAGGTGCATCTTGCACTAGGGACAACAATTATACGCATAGATATAGAAAGGAGGGCATCAGAGCCATTGGGGGGGGGGGGGGGGGTGATTTAATAACTGAATTTCCTTTCACTAAAGAAATGGTGAAGTCTCTTATGCAGCATAGGAGTACTTCCGGCATGAAGAAACAGTCAAAATGTGGACATATTGATACACCGACTGAAGCAACTAAGTTAGGAAAGAAATGAGCTTGAATAATCAGTAAGCTGAAGGATGTGTTGTTTGCAACTTGCAAGTTGACCCTTTTACTTGATTTTCTCCATCCAATGGATTTTCTTTTACCGGGTTTGCTTAAGTCAAAGAAATCGAGATATACCTTCTTCTAGACAGGCGCGATGGCGAATATTCCATCAGAAAGAGGAGGAGGAGGTGACCTCCGGCGACGGTGCTTGTCGGCGCATCACACGGCCATTACATCGAACAGCTCACGTGCAGCACCGGAGATTGAGCGCACGAGAGCGGAAAGCCCGGTGACGGCGGCGCCCACATCTCGACGGTTGCGGCGGCCACCGCCGCCGCCGCCGCCGCTAGCTTCTGCCACGGCGAAGGCCAGGGTACCCCCCGCGTCATCTTCCCGTTCGCCGGTGAGGCGGTGATCGCCGCTACAGGAGAAGGGGGAAAGACGAGAAGACATATTTGCGGAC
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| CDS seq | ATGGCAGAAATTATCGTTCTTTTTGTCATAAAAAAGATAGGAATAGCTGTGGCAGGTGAAACACTGAAGCTAGCTAAACCCTTGCTTGCAAACAAAACCGAGTTAAAGAAAGCTGAGCTAGTAACAGCACTTCCAGTTAACATGAAACTGATAAAAGATGAACTTGAGGTTATCAATGCATTTCTGAAGGAACTTGGCATGAATGGATGCAAAGGTGAAGTTGTAGAAACTTGGGTAAGGCAAGTACGGAGGTTGGCGCATGATATGGAAGATGTTGTGGATGAGTTTATGTATGTTATTGGCAAAAACAAAGAGAGAGAGTCACGAGCTTATGTGAAGAAAATTATCAAGAAACCTAAACCTTTATTTTCACTTGATGAAATTGCTACTAAAGCAGATAGGATAAACAGACAGCTTATGGAGCTTTCTAAAAGACTAGGACGTTGGACCCAACCGATATTGAGTGGGGGTAGTATTCCTGCAACAAAATATGACACTGAACAACAACAGTTGTATCTACCTGGACATGATTATTCAATTACTGATGCTGAGCTTGTAGGAATTGATAAAAATAGACAAACCTTGATTGAATCATTGTGTTTGGAAGATTGTTCTCTTCGGATCATTGCTGTCTGGGGCATGGGTGGCCTTGGGAAAAGCACTCTTGTCAACAATGTCTACAAAAAAGAAGCAACAGTATCCAATTTCAATTACCGTGCATGGCTTTCTATCTCTCAGTCATGTAGAGTACTTGATATTTGGCGAAACATGCTGAAAGAGCTCTGTGGAAAAGAAAGCAGAGAGTTTGATGCTGAAAATATGAGCAGTACAGAACTAAAAGTGGAATTAACTAAAATTCTGGATCAAAAGCGGTACTTGATCATATTGGATGATGTCTGGTTGGCTACAGATTTTTTAAAGATTAGAGAGGTTCTTGTTGATAATGGCCTAGGAAGCAGAGTAATAATCACAACAAGAATTGAGGAAGTTGCTTCCATAGCTGAGAATGGTTGTAAGATCAGTTTAGAGCCTCTAGATAACCATGATGCATGGCTTCTCTTCTGTAGGAAAGCATTTCCAAAAATTGAAGATCATATATGCCCTCCAGAATTAGAGCAGTGTGGTATGGACATTATCGATAAATGTGACGGTTTGCCTTTAGCTCTTGTGGCAATAGGGAGTTTATTGTCCTTCAAATCAAAGAATAATAAAGATTGGAGGCTTTTCTACAATCAACTTATTTCAGAGGTACACAATAATGAGAACTTAAACCGGGTGGAGAAAATTCTAAATCTAAGCTACAAGCACCTGCCAAACCATCTGAAGTATTGTTTCTTATATTGTGCTATGTTCCCAGAAGATTATCTGATTCACAGAAAGAGATTAATTAGACTGTGGATCAGTGAAGGATTTATAGAACAAAAAGGAGCATGCAGCTTAGAAGATGTCGCTGAAGGTTACCTAGCAGAGCTTGTCCAACGAAGCATGCTTCAAGTTGTAGCATGTAACAGTTTTGATAGGGTTCAGTGTCTTCGAATGCATGACATTGTGCGTGAATTAGCCATTTTCCAATTGAAGAAAGAAAGTTTCTGTACAATTTATGATGACACTCATGGAGTGGCACAAGTGGGATTAGACTCTCGTCGTGTCTCGGTGCTTCGATGCAACAATGATATTAGATCAAGCATAGATCCATCCAGGCTTCACACCTTCATAGCATTTGACACCACCATGGCATTATCTTCATGGTCTTCTTTCATTTTCTCAGAATCTAAGTACCTTAATGTATTAGACTTGTCAGGCTTGCCTATTGAGACTATTCCATATTCAGTTGGGGAGCTGTTTAACCTTCGGTTTTTGTGTCTCAACGACACCAATGTGAAGGAATTCCCAAAATCTGTTACGAAGCTTAGCAATTTACAAACATTGAGCCTTGAACGTACCCAGTTGTTGAATTTCCCACGAGGGTTTTCAAATCTAAAGAAATTGCGCCATCTGCTTGTTTGGAAGTTAGTAGATGCTACATACAAAAGTCTGAATAACTGGGAATCTATGGAGCCATTTGAGGGCTTGTGGGACTTGAAGGAATTGCATTATTTGAATGAGGTTCGTGCAACTAAAGCCTTTGTTTCAAATCTAGGAAATTTATCCCAGCTGAGGAGCCTCTGCATTACTTATGTAAGGAGTAGTCACTGTGTGCAATTGTGCAACTCTTTATCAAAGATGCAACATCTCACAAGATTAAACATAAGAGCACGCAATGAAGATGAGCTGCTCTTGCTGGATGATTTCACATTGTCAAACCCTCTCGAAAAGCTTGAACTGGTAGGCCAGTTGTCAGAAGGAACCTTGGAATCTCCCTTTTTCTCTATTCATGGATATAAACTCCTGCAAATTGAACTTTCATGGTGTAAGCTCACAGTGAATCCAGTGGCCCGCCTTGCAGAGTTCTCGGATTTAACCGAGTTACGTCTTACAAGGGTGTACACTGGGCCTTGGCTGTACTTTCCTGCAAACTGGTTCCCGAAATTAAAGAAAGCCGTCTTGTGGGATTTGCAGCAAGTGAAGCAAATATTTATACAGGAGGGAGCTCTGGCCAACCTGCATTATCTTCACATCGATAGCCTCATGGAACTACGTGACATCCCTGTCGGTATTGAGTTTCTCAGTTCAGTGAAAGAGGCATATTTTACCAGGATGCATTCTGATTTTGTAAGGAATTTACGAACAGGAAAGATAAGCCATATCCCGAAGGTCCACTGGTCAACACAAGGGGTGTCCACGGATCTCACTGGACTTGCTAATCTGCCTGGAGCATCCAACATGACCAACACAAACCCAGAATGGCGCATCTTAGGTGGATCAGGCTGGGTTTTCATCTAA
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| Protein seq | MAEIIVLFVIKKIGIAVAGETLKLAKPLLANKTELKKAELVTALPVNMKLIKDELEVINAFLKELGMNGCKGEVVETWVRQVRRLAHDMEDVVDEFMYVIGKNKERESRAYVKKIIKKPKPLFSLDEIATKADRINRQLMELSKRLGRWTQPILSGGSIPATKYDTEQQQLYLPGHDYSITDAELVGIDKNRQTLIESLCLEDCSLRIIAVWGMGGLGKSTLVNNVYKKEATVSNFNYRAWLSISQSCRVLDIWRNMLKELCGKESREFDAENMSSTELKVELTKILDQKRYLIILDDVWLATDFLKIREVLVDNGLGSRVIITTRIEEVASIAENGCKISLEPLDNHDAWLLFCRKAFPKIEDHICPPELEQCGMDIIDKCDGLPLALVAIGSLLSFKSKNNKDWRLFYNQLISEVHNNENLNRVEKILNLSYKHLPNHLKYCFLYCAMFPEDYLIHRKRLIRLWISEGFIEQKGACSLEDVAEGYLAELVQRSMLQVVACNSFDRVQCLRMHDIVRELAIFQLKKESFCTIYDDTHGVAQVGLDSRRVSVLRCNNDIRSSIDPSRLHTFIAFDTTMALSSWSSFIFSESKYLNVLDLSGLPIETIPYSVGELFNLRFLCLNDTNVKEFPKSVTKLSNLQTLSLERTQLLNFPRGFSNLKKLRHLLVWKLVDATYKSLNNWESMEPFEGLWDLKELHYLNEVRATKAFVSNLGNLSQLRSLCITYVRSSHCVQLCNSLSKMQHLTRLNIRARNEDELLLLDDFTLSNPLEKLELVGQLSEGTLESPFFSIHGYKLLQIELSWCKLTVNPVARLAEFSDLTELRLTRVYTGPWLYFPANWFPKLKKAVLWDLQQVKQIFIQEGALANLHYLHIDSLMELRDIPVGIEFLSSVKEAYFTRMHSDFVRNLRTGKISHIPKVHWSTQGVSTDLTGLANLPGASNMTNTNPEWRILGGSGWVFI |
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| Function | Disease resistance protein RPM1 [UniProtKB/Swiss-Prot:Q39214] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os09g0479500 | Os09t0479500-01 | Chr09 | 18391869 | 18397839 | - | irgsp1_rep | ||
| CDS seq | ATGGCAGAAATTATCGTTCTTTTTGTCATAAAAAAGATAGGAATAGCTGTGGCAGGTGAAACACTGAAGCTAGCTAAACCCTTGCTTGCAAACAAAACCGAGTTAAAGAAAGCTGAGCTAGTAACAGCACTTCCAGTTAACATGAAACTGATAAAAGATGAACTTGAGGTTATCAATGCATTTCTGAAGGAACTTGGCATGAATGGATGCAAAGGTGAAGTTGTAGAAACTTGGGTAAGGCAAGTACGGAGGTTGGCGCATGATATGGAAGATGTTGTGGATGAGTTTATGTATGTTATTGGCAAAAACAAAGAGAGAGAGTCACGAGCTTATGTGAAGAAAATTATCAAGAAACCTAAACCTTTATTTTCACTTGATGAAATTGCTACTAAAGCAGATAGGATAAACAGACAGCTTATGGAGCTTTCTAAAAGACTAGGACGTTGGACCCAACCGATATTGAGTGGGGGTAGTATTCCTGCAACAAAATATGACACTGAACAACAACAGTTGTATCTACCTGGACATGATTATTCAATTACTGATGCTGAGCTTGTAGGAATTGATAAAAATAGACAAACCTTGATTGAATCATTGTGTTTGGAAGATTGTTCTCTTCGGATCATTGCTGTCTGGGGCATGGGTGGCCTTGGGAAAAGCACTCTTGTCAACAATGTCTACAAAAAAGAAGCAACAGTATCCAATTTCAATTACCGTGCATGGCTTTCTATCTCTCAGTCATGTAGAGTACTTGATATTTGGCGAAACATGCTGAAAGAGCTCTGTGGAAAAGAAAGCAGAGAGTTTGATGCTGAAAATATGAGCAGTACAGAACTAAAAGTGGAATTAACTAAAATTCTGGATCAAAAGCGGTACTTGATCATATTGGATGATGTCTGGTTGGCTACAGATTTTTTAAAGATTAGAGAGGTTCTTGTTGATAATGGCCTAGGAAGCAGAGTAATAATCACAACAAGAATTGAGGAAGTTGCTTCCATAGCTGAGAATGGTTGTAAGATCAGTTTAGAGCCTCTAGATAACCATGATGCATGGCTTCTCTTCTGTAGGAAAGCATTTCCAAAAATTGAAGATCATATATGCCCTCCAGAATTAGAGCAGTGTGGTATGGACATTATCGATAAATGTGACGGTTTGCCTTTAGCTCTTGTGGCAATAGGGAGTTTATTGTCCTTCAAATCAAAGAATAATAAAGATTGGAGGCTTTTCTACAATCAACTTATTTCAGAGGTACACAATAATGAGAACTTAAACCGGGTGGAGAAAATTCTAAATCTAAGCTACAAGCACCTGCCAAACCATCTGAAGTATTGTTTCTTATATTGTGCTATGTTCCCAGAAGATTATCTGATTCACAGAAAGAGATTAATTAGACTGTGGATCAGTGAAGGATTTATAGAACAAAAAGGAGCATGCAGCTTAGAAGATGTCGCTGAAGGTTACCTAGCAGAGCTTGTCCAACGAAGCATGCTTCAAGTTGTAGCATGTAACAGTTTTGATAGGGTTCAGTGTCTTCGAATGCATGACATTGTGCGTGAATTAGCCATTTTCCAATTGAAGAAAGAAAGTTTCTGTACAATTTATGATGACACTCATGGAGTGGCACAAGTGGGATTAGACTCTCGTCGTGTCTCGGTGCTTCGATGCAACAATGATATTAGATCAAGCATAGATCCATCCAGGCTTCACACCTTCATAGCATTTGACACCACCATGGCATTATCTTCATGGTCTTCTTTCATTTTCTCAGAATCTAAGTACCTTAATGTATTAGACTTGTCAGGCTTGCCTATTGAGACTATTCCATATTCAGTTGGGGAGCTGTTTAACCTTCGGTTTTTGTGTCTCAACGACACCAATGTGAAGGAATTCCCAAAATCTGTTACGAAGCTTAGCAATTTACAAACATTGAGCCTTGAACGTACCCAGTTGTTGAATTTCCCACGAGGGTTTTCAAATCTAAAGAAATTGCGCCATCTGCTTGTTTGGAAGTTAGTAGATGCTACATACAAAAGTCTGAATAACTGGGAATCTATGGAGCCATTTGAGGGCTTGTGGGACTTGAAGGAATTGCATTATTTGAATGAGGTTCGTGCAACTAAAGCCTTTGTTTCAAATCTAGGAAATTTATCCCAGCTGAGGAGCCTCTGCATTACTTATGTAAGGAGTAGTCACTGTGTGCAATTGTGCAACTCTTTATCAAAGATGCAACATCTCACAAGATTAAACATAAGAGCACGCAATGAAGATGAGCTGCTCTTGCTGGATGATTTCACATTGTCAAACCCTCTCGAAAAGCTTGAACTGGTAGGCCAGTTGTCAGAAGGAACCTTGGAATCTCCCTTTTTCTCTATTCATGGATATAAACTCCTGCAAATTGAACTTTCATGGTGTAAGCTCACAGTGAATCCAGTGGCCCGCCTTGCAGAGTTCTCGGATTTAACCGAGTTACGTCTTACAAGGGTGTACACTGGGCCTTGGCTGTACTTTCCTGCAAACTGGTTCCCGAAATTAAAGAAAGCCGTCTTGTGGGATTTGCAGCAAGTGAAGCAAATATTTATACAGGAGGGAGCTCTGGCCAACCTGCATTATCTTCACATCGATAGCCTCATGGAACTACGTGACATCCCTGTCGGTATTGAGTTTCTCAGTTCAGTGAAAGAGGCATATTTTACCAGGATGCATTCTGATTTTGTAAGGAATTTACGAACAGGAAAGATAAGCCATATCCCGAAGGTCCACTGGTCAACACAAGGGGTGTCCACGGATCTCACTGGACTTGCTAATCTGCCTGGAGCATCCAACATGACCAACACAAACCCAGAATGGCGCATCTTAGGTGGATCAGGCTGGGTTTTCATCTAA
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| Protein seq | MAEIIVLFVIKKIGIAVAGETLKLAKPLLANKTELKKAELVTALPVNMKLIKDELEVINAFLKELGMNGCKGEVVETWVRQVRRLAHDMEDVVDEFMYVIGKNKERESRAYVKKIIKKPKPLFSLDEIATKADRINRQLMELSKRLGRWTQPILSGGSIPATKYDTEQQQLYLPGHDYSITDAELVGIDKNRQTLIESLCLEDCSLRIIAVWGMGGLGKSTLVNNVYKKEATVSNFNYRAWLSISQSCRVLDIWRNMLKELCGKESREFDAENMSSTELKVELTKILDQKRYLIILDDVWLATDFLKIREVLVDNGLGSRVIITTRIEEVASIAENGCKISLEPLDNHDAWLLFCRKAFPKIEDHICPPELEQCGMDIIDKCDGLPLALVAIGSLLSFKSKNNKDWRLFYNQLISEVHNNENLNRVEKILNLSYKHLPNHLKYCFLYCAMFPEDYLIHRKRLIRLWISEGFIEQKGACSLEDVAEGYLAELVQRSMLQVVACNSFDRVQCLRMHDIVRELAIFQLKKESFCTIYDDTHGVAQVGLDSRRVSVLRCNNDIRSSIDPSRLHTFIAFDTTMALSSWSSFIFSESKYLNVLDLSGLPIETIPYSVGELFNLRFLCLNDTNVKEFPKSVTKLSNLQTLSLERTQLLNFPRGFSNLKKLRHLLVWKLVDATYKSLNNWESMEPFEGLWDLKELHYLNEVRATKAFVSNLGNLSQLRSLCITYVRSSHCVQLCNSLSKMQHLTRLNIRARNEDELLLLDDFTLSNPLEKLELVGQLSEGTLESPFFSIHGYKLLQIELSWCKLTVNPVARLAEFSDLTELRLTRVYTGPWLYFPANWFPKLKKAVLWDLQQVKQIFIQEGALANLHYLHIDSLMELRDIPVGIEFLSSVKEAYFTRMHSDFVRNLRTGKISHIPKVHWSTQGVSTDLTGLANLPGASNMTNTNPEWRILGGSGWVFI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0479500 | RBH | 0.000000 | 0.060565 | 0.975006 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g30220 | RBH | 0.000000 | 0.040735 | 0.250985 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0479600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0014160 | RBH | 0.109056 | 1.506392 | 1.160318 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0014120 | RBH | 0.0 | 0.0 | 0.308476 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0014370 | RBH | 0.407354 | 0.0 | 0.442599 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0014200 | RBH | 0.0 | 0.014269 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0014300 | SBH | 0.158131 | 2.597712 | 0.170243 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0307300 | RBH | 0.197258 | 0.904439 | 0.4737405 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0014190 | SBH | 0.000000 | 0.000000 | 0.109314 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0297500 | RBH | 0.519293 | 1.190614 | 3.538157 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0014170 | RBH | 0.0 | 0.038216 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0014010 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0014060 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0013960 | RBH | 0.057877 | 0.0 | 0.087831 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0014020 | RBH | 0.018382 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G014500 | RBH | 0.037926 | 0.215150 | 0.299855 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0014270 | SBH | 0.071551 | 4.118673 | 0.730405 |
