Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
Os07g0640300 OGI:07073910 | 16/16 Nipponbare | IRGSP 1.0 | RAP-db Chr07:26646515-26647959
Gene Symbol -
DNA seq

GTCAACAAATGTATAGGTGGTCCCATAAAGTTTTGTTTATTCGATTACAGCAAACTGTAGGTAGGTAGTAATACTGTGAGCTGGAAACAGTAGGAAACTGTAAGTTCTAAATCTCATTGTTTTTGACATTTTCTCCATCGAGAATGATATGCATGTGAGGAAGCTTATTTTTCATGTAATTCACAACGTGAGCTTGAGTTGGCTGCAGCTTGGAGAGGTCGTCGGTGGATGATTTCCCTTGGAGAGTGATAGAAATAGCTGTTGATTTGGATGCAATAATCTTGGAAACTGCTTGCAGGTAGTTGGTGTGGATGAGTTGCACCTCATGGTTCCTGAAGAAGAGTAATGCGTTTTATGATGTATAGATAGGCATATACAATGTACAGAGCACTGAAATGCATGAAGCATGTTAAATATAAAATATAAGCTTGAAAACTATGTAATTAGGAAGCTATAGCTGAACATGGATAGCGAGAGCTAACCTATTTTTTTCTGGTTGTTGGTCCATCTGTGTTGGCAATGGACGTTGTGTTTGCAGAAGAAATTTTGTGAAGGAAGGACTGTGGTATGAGAAATTGAGCAGTGCACATGTGGTGGTGTTGTGGGTGATTCTTATAGTATTTCACTGGTGATAATAAGGATACTAATTTTGTTTTCTCATTTATTGCAGAATCAGATATGATTAAGAATCATATCTTGAGTCTTTTATTATTGAGGATAAAATATGGAATAGATATAAATGCCATATTTCAGATTTGGTTGGTTTTGCCAGTAAACTTGCAAGTAATGGTTGCAAAGATAAGTTAGCAATGATGGTGATAGATTTGGTGCAGGTTTAAATTTCTTAAGGAAATTGTTAGCAGTGATGGTGACAGATTTGGTGCAGGTCTAATTTTTTTAAGAAAAACTATATATGTTGCTGATAAAAGGCCATGTTGTAGGAGAATTGTGAAGGATTTGAAGAGTTGTACCTGTTCCTTGTGACCCGATGGCTGTTGATCAGCTATCTTTGGCTGCTGCAGCTGGTTTTCCTCTCCATTGGTGGAGGCTTCCATTCTGAATTTAGCAGTCAAATTAGTAGCAAAACATACATACATATATATATGCGCGCGCGTGACACACATATATATGTTTATAGGCTGAAACTTAAGGTGTGCACGTACACTTTTTTATGGCGCTTAGAATTTTGTCCTGGAGAAAATTCTGTTGACGGTTGTTTTTCCTTGCTGAGATCTACTTGTTGGGAATGATAAAGTTGATTTGTTGCAACCTGAATAGTGTTTGCAATTGCTGGGCTGATGCATATATGAAAGGAATTTAGTTGAAGAATAGTTTGTATATTCTGCAAAAAGAACTTGTATCAGTGCAGTACCTTGGTTGATCAATGTGTAACTCCTTTTCAAATTGAAGAGCTCTCTTTGCTGAAGGTATAATTTGGTTTACTG

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CDS seq

GTAAACCAAATTATACCTTCAGCAAAGAGAGCTCTTCAATTTGAAAAGGAGTTACACATTGATCAACCAAGCCCAGCAATTGCAAACACTATTCAGGTTGCAACAAATCAACTTTATCATTCCCAACAAGTAGATCTCAGCAAGGAAAAACAACCGTCAACAGAATTTTCTCCAGGACAAAATTCTAAGCGCCATAAAAAAGTAATGGAAGCCTCCACCAATGGAGAGGAAAACCAGCTGCAGCAGCCAAAGATAGCTGATCAACAGCCATCGGGTCACAAGGAACAGGAACCATGA

Protein seq

VNQIIPSAKRALQFEKELHIDQPSPAIANTIQVATNQLYHSQQVDLSKEKQPSTEFSPGQNSKRHKKVMEASTNGEENQLQQPKIADQQPSGHKEQEP

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
Os07g0640300 Os07t0640300-00 Chr07 26646515 26647959 - irgsp1_rep
CDS seq

GTAAACCAAATTATACCTTCAGCAAAGAGAGCTCTTCAATTTGAAAAGGAGTTACACATTGATCAACCAAGCCCAGCAATTGCAAACACTATTCAGGTTGCAACAAATCAACTTTATCATTCCCAACAAGTAGATCTCAGCAAGGAAAAACAACCGTCAACAGAATTTTCTCCAGGACAAAATTCTAAGCGCCATAAAAAAGTAATGGAAGCCTCCACCAATGGAGAGGAAAACCAGCTGCAGCAGCCAAAGATAGCTGATCAACAGCCATCGGGTCACAAGGAACAGGAACCATGA

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Protein seq

VNQIIPSAKRALQFEKELHIDQPSPAIANTIQVATNQLYHSQQVDLSKEKQPSTEFSPGQNSKRHKKVMEASTNGEENQLQQPKIADQQPSGHKEQEP

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM None None None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_07g0640300 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os07g44670 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os08g0522100 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_07g0024950 RBH 0.000000 0.000000 0.000000
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_07g0025030 RBH 0.0 0.000000 0.000000
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_07g0024890 RBH 1.974546 5.043419 18.939560
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_07g0024780 RBH 1.177987 0.390499 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_07g0024910 RBH 6.358383 18.690557 16.893227
Minghui 63 | MH63RS3 | HZAU OsMH63_07G0438400 RBH 1.830964 6.047397 4.5269475
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_07g0025440 RBH 0.607454 0.420413 3.328718
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_08G0435500 SBH 0.0409375 0.117331 0.006656
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_07g0024720 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_07g0024840 RBH 0.099591 1.258182 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_07g0024760 RBH 3.094018 8.910427 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_07g0024970 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_07g0024670 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_07G024660 RBH 0.702856 2.656953 3.489969
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_07g0024720 RBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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