Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os06g0292400 | OGI:06030460 | 14/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr06:10738687-10742348 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | AACCTTCAAACTTGTTGTTTAAGTGGCAGTGTGTTTACTCTTGAAGGATGTTCATGATGCTTCTCATAGGAATTCTTACTTATCTTCCTTGATCTCAGACATTTCGCGATGCTACTTGCTAAAATGGTCACCAACAGAAGGTATATTGTGACACCGATTACTAGACCATAGACATAAACTGAGGTCCTGAATTTCCTGCAGCTTCCCGCAGCGAAAGCCGTCATGAGAGCCAGCAAATCTAGTATCATGATCAAGTGCAATACCCCAAGTGGTACATTCTTCTCCCTGACAGATTTGCTCAGCAGAAGCATGATCACAACAATGGATGACATGAAGGAGAATGCATTGAAGCAGAAGAATGCTTTGTAGCGATGGGGATGAATATTATGAAGGACTGGGTCGCCAGCCTTGTGTTTTGGGGGATCTGAACTGTCATCCGACCAGAAGCCACCAGGTGGGTTCAGACCAGCTTGGTATGTGATGGAGGCCGCCAAAATTGAAAGCAACATCAGATACTTGTGTCTTTTTCTTTCACTTTTGTCACCAGGATCTGGACTTCCTTGGATCTCAGAACCAATATCTTGCCTAACCTCCTTAGTCTGAAAAATCCACTCAAGCAAACTTTCCATACACTTGCACAATGGCTTTCCTAGTTTATCATATGTTGAAGACATAATGAAGACTTGAATCATAAGGGAGATCAGAACTGCAACAGCAACGATGATGAGATAAATAGATTGTTTTGCTTTCCTGCAGCTTCCTGCAGCATAAGCAATCAAGAGGCCAACCAATCCTGCTGCCAAACACACTCGCAATGCATAGAACTTCATACCATGCTCACAGGATCCCTTGTTCACGAGTAGTATTGTGATGACAACAGATGACACGAATGAGACTGAATTTGAGTAGTAGAACACATTATAGCGTCTTAAATTGTTCTCCTGAAGGACTGGGTTGCCTGTAAGGGTGCGGTTGATATCCTTGTCATCAGACCATACACTTCCTGGAGGGTTCATGCCAGCTTGGTATGTGACAGTCGCAGCGAGAATAGAAAGAATCAATAGTAGATTGCGCCTTCGCTCCCAATCCTTCTCATTGCCATGCCCTGTCTGGTTGCTGCCATGGAGAGGCGACCACAAATGTCTGCACGAGAGGCGGTTTAGCTTTTCTGCCACCTGCCTTTTCCAACCTTCTGGGATTACATGAATTGCTATCAAAACATGAATACCAACATAAGCAAGCACGAGGAGTACCATCACTGAGATATAAACTGAATTCTTTGTCTTCCTACAGCTTCCCATAACATAAGCCCCTGTTAAGGACAGGAGGATCACTATCATTGCTATCTGCAGTGCACGCCGTTTTATAACCTTGTTGGCCATTCTTCTGTTCAGGAGCATAATGATCATGACAACGGATGCAACAAAGGCAATTGCATTTAGATAGAAGAATGCAATATAGCGAGGGTGGTGAGTGTCCTCAAGGATGTGATCACCAGATGAATGATAATCCTCGTGTCTTGTCCAGAAGCCGCCTGGTGGATTCAGACCTGATTGGTATGTCAGAGATACTGCAAGAATCGCAAGGAGGAGTAGATATGTGCGGCACTTCTTCAGATGCTTAGCAGTTTGATTTCTATTGCCATCTTCATTGGGAGATCTTTCATTCTTGTCAATATAGCCATTCTCAACATGTGGAGCAATTTTATTATCTTCAGCAATTTCAATCTCACTATGTCCCACAGGCACATTAGGAGATACTTTCTCTTCTGGTGTAACAACAGTCCCAGGTTCATCAGTCGACGAAGATTGTTCCATTTTATTTATAACATGCTGGCTGTCTGTAGATCGATTGTCAGGGTCAGGCATACTGCCTTCAGTATCTGTAGTCTTTAAGTCGTTAGTCATTGTGGATTGTTCCTTCATATCTGTAACTTGATGGCTATCTGCAGATTGAGGCTCAGGGTCAGAAATACCATCCTTAAGTGTCTTGAAATCATCGATTGATGAAGAATTTTCCTTTGTATTTGCATCTTGCTGATTGTCTGCAGATTGATGCATACCGTCCTTATAGTTTGTAGCATGTTGACTTTTTTCAGATGGGTGCTGTGTGTTGGATATAGATTCCTCTGCGGTTGGTTGGGCTTGGTCGTCTATAGACTGACCCTGCAGGTTGTACACAACATCTGTGCTACACATAGATTGCTGATAACCGGCCGATGGATGGTCAGAGTCAGGCTCAGCCTCCTCGGAATTTGCAGATTGACATTCGCCAGAAGGCTGATTCTTCGCATGTGACTCTCCCTCTTCAATATCTGTACTTTGCAGAGCATTTTCTTTTACTTGTGCATCTGGTTCAAGCTCCGTTTGCAGATGATTTGCTTGAGAATTTTCTTGTTCTCTATCAATTGATCTGTTTCTCTTAAAATCCAATGAAAAAACCCGGCCAATTGTACCAATGCATGTCAGAGTGTCTGGTTTGATCTTTTGTAGCCAATCTGCGACAGGTTTGTAAACCAAGATTCCAGCCAAAACCACAAAGCAGGTCAAGACTATGATGGAAACAGACATAACATAGAAAGAAACTGCTATATCTCTACAGCTTCCTGCAGCATACGCACCTATCAGGCCCAATAGGTCAGCTACCACACACACAATAACTGCTTTAGATCTTATTCCATGCATGCTCAATTCTGGGCTAAGAAGCAACATGATTGTGACCAAAGATGCCACAAATGAAGTTGCATTGCAACTCATGAAAAAATTATACCGAAGAAGATAGTTACTCCGAAGAATAGGGGTTGCTGGATGACTGCTGCCTTCAGTCCAAAAACCACCTGGTGGACTTAATCCTGCTTGGTAAGTGATAGTTGCAGAAAAAGTTGCAAGTGTCAAAATGAACTTGCGAGCCTCCTCAATGTTTCTTTTTTGATCGTTGCTCCTGTTCTCCTCATGTACACCCCACTTTGCTTGAATTTTCTGTAGCAGCATTTGTACTCTCTCTTTCAACCATTTTGGAAATATCCTTGTGCATAACAAAATGTGAATTCCAACATATATGAAAACAGCAACAACTAGGACCCATATATAAATGGAAGACTTTACTGCCCTGCAGCTTCCAGCAGCATAGGCTCCCATCAAGCTGAATAGGTCTAATATCATGGTAAATTGCATTGAACGGAGCCACAAATTCTGCCTCGTCACACTCTTACTTAGAAGCAATATGATTAAGACAAGAGATGCAGCAAAGGCTGTTGCATTGCAGTAAAAGAATACCTCATACCGTGGGAAGAAGTAAACACGAAGGAGAGGTTCACCAGCATCACGTCCATTAGTCGTGTTTTTTGTCCGAAATCCACCCGGTGGGGTTAATCCAGCATTATATGTCACACTGACTGCTAAGATTGCAAGCATTACAAGGTACTTCCGCAGTCTCCACAAGAGCTCAAAATCAACTGTGATGCTGGGTGCATGGCTACTGGCCAATAAAAACCTACTGGACAAACCATTCATGGAGTCTTGCCTGTCGCTGCCAGTTTCCATGCCATACTCTGCCCTATCCCCATTGGTGTTGTTTTCTTCACTCTGTCCATTGACTGGTATTAGGACATCTGTGGTATTGGTCAGAGCAATGGTGAGCTTGGGTTGCCTTCCATTTTCCAT
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| CDS seq | ATGGAAAATGGAAGGCAACCCAAGCTCACCATTGCTCTGACCAATACCACAGATGTCCTAATACCAGTCAATGGACAGAGTGAAGAAAACAACACCAATGGGGATAGGGCAGAGTATGGCATGGAAACTGGCAGCGACAGGCAAGACTCCATGAATGGTTTGTCCAGTAGGTTTTTATTGGCCAGTAGCCATGCACCCAGCATCACAGTTGATTTTGAGCTCTTGTGGAGACTGCGGAAGTACCTTGTAATGCTTGCAATCTTAGCAGTCAGTGTGACATATAATGCTGGATTAACCCCACCGGGTGGATTTCGGACAAAAAACACGACTAATGGACGTGATGCTGGTGAACCTCTCCTTCGTGTTTACTTCTTCCCACGGTATGAGGTATTCTTTTACTGCAATGCAACAGCCTTTGCTGCATCTCTTGTCTTAATCATATTGCTTCTAAGTAAGAGTGTGACGAGGCAGAATTTGTGGCTCCGTTCAATGCAATTTACCATGATATTAGACCTATTCAGCTTGATGGGAGCCTATGCTGCTGGAAGCTGCAGGGCAGTAAAGTCTTCCATTTATATATGGGTCCTAGTTGTTGCTGTTTTCATATATGTTGGAATTCACATTTTGTTATGCACAAGGATATTTCCAAAATGGTTGAAAGAGAGAGTACAAATGCTGCTACAGAAAATTCAAGCAAAGTGGGGTGTACATGAGGAGAACAGGAGCAACGATCAAAAAAGAAACATTGAGGAGGCTCGCAAGTTCATTTTGACACTTGCAACTTTTTCTGCAACTATCACTTACCAAGCAGGATTAAGTCCACCAGGTGGTTTTTGGACTGAAGGCAGCAGTCATCCAGCAACCCCTATTCTTCGGAGTAACTATCTTCTTCGGTATAATTTTTTCATGAGTTGCAATGCAACTTCATTTGTGGCATCTTTGGTCACAATCATGTTGCTTCTTAGCCCAGAATTGAGCATGCATGGAATAAGATCTAAAGCAGTTATTGTGTGTGTGGTAGCTGACCTATTGGGCCTGATAGGTGCGTATGCTGCAGGAAGCTGTAGAGATATAGCAGTTTCTTTCTATGTTATGTCTGTTTCCATCATAGTCTTGACCTGCTTTGTGGTTTTGGCTGGAATCTTGGTTTACAAACCTGTCGCAGATTGGCTACAAAAGATCAAACCAGACACTCTGACATGCATTGGTACAATTGGCCGGGTTTTTTCATTGGATTTTAAGAGAAACAGATCAATTGATAGAGAACAAGAAAATTCTCAAGCAAATCATCTGCAAACGGAGCTTGAACCAGATGCACAAGTAAAAGAAAATGCTCTGCAAAGTACAGATATTGAAGAGGGAGAGTCACATGCGAAGAATCAGCCTTCTGGCGAATGTCAATCTGCAAATTCCGAGGAGGCTGAGCCTGACTCTGACCATCCATCGGCCGGTTATCAGCAATCTATGTGTAGCACAGATGTTGTGTACAACCTGCAGGGTCAGTCTATAGACGACCAAGCCCAACCAACCGCAGAGGAATCTATATCCAACACACAGCACCCATCTGAAAAAAGTCAACATGCTACAAACTATAAGGACGGTATGCATCAATCTGCAGACAATCAGCAAGATGCAAATACAAAGGAAAATTCTTCATCAATCGATGATTTCAAGACACTTAAGGATGGTATTTCTGACCCTGAGCCTCAATCTGCAGATAGCCATCAAGTTACAGATATGAAGGAACAATCCACAATGACTAACGACTTAAAGACTACAGATACTGAAGGCAGTATGCCTGACCCTGACAATCGATCTACAGACAGCCAGCATGTTATAAATAAAATGGAACAATCTTCGTCGACTGATGAACCTGGGACTGTTGTTACACCAGAAGAGAAAGTATCTCCTAATGTGCCTGTGGGACATAGTGAGATTGAAATTGCTGAAGATAATAAAATTGCTCCACATGTTGAGAATGGCTATATTGACAAGAATGAAAGATCTCCCAATGAAGATGGCAATAGAAATCAAACTGCTAAGCATCTGAAGAAGTGCCGCACATATCTACTCCTCCTTGCGATTCTTGCAGTATCTCTGACATACCAATCAGGTCTGAATCCACCAGGCGGCTTCTGGACAAGACACGAGGATTATCATTCATCTGGTGATCACATCCTTGAGGACACTCACCACCCTCGCTATATTGCATTCTTCTATCTAAATGCAATTGCCTTTGTTGCATCCGTTGTCATGATCATTATGCTCCTGAACAGAAGAATGGCCAACAAGGTTATAAAACGGCGTGCACTGCAGATAGCAATGATAGTGATCCTCCTGTCCTTAACAGGGGCTTATGTTATGGGAAGCTGTAGGAAGACAAAGAATTCAGTTTATATCTCAGTGATGGTACTCCTCGTGCTTGCTTATGTTGGTATTCATGTTTTGATAGCAATTCATGTAATCCCAGAAGGTTGGAAAAGGCAGGTGGCAGAAAAGCTAAACCGCCTCTCGTGCAGACATTTGTGGTCGCCTCTCCATGGCAGCAACCAGACAGGGCATGGCAATGAGAAGGATTGGGAGCGAAGGCGCAATCTACTATTGATTCTTTCTATTCTCGCTGCGACTGTCACATACCAAGCTGGCATGAACCCTCCAGGAAGTGTATGGTCTGATGACAAGGATATCAACCGCACCCTTACAGGCAACCCAGTCCTTCAGGAGAACAATTTAAGACGCTATAATGTGTTCTACTACTCAAATTCAGTCTCATTCGTGTCATCTGTTGTCATCACAATACTACTCGTGAACAAGGGATCCTGTGAGCATGGTATGAAGTTCTATGCATTGCGAGTGTGTTTGGCAGCAGGATTGGTTGGCCTCTTGATTGCTTATGCTGCAGGAAGCTGCAGGAAAGCAAAACAATCTATTTATCTCATCATCGTTGCTGTTGCAGTTCTGATCTCCCTTATGATTCAAGTCTTCATTATGTCTTCAACATATGATAAACTAGGAAAGCCATTGTGCAAGTGTATGGAAAGTTTGCTTGAGTGGATTTTTCAGACTAAGGAGGTTAGGCAAGATATTGGTTCTGAGATCCAAGGAAGTCCAGATCCTGGTGACAAAAGTGAAAGAAAAAGACACAAGTATCTGATGTTGCTTTCAATTTTGGCGGCCTCCATCACATACCAAGCTGGTCTGAACCCACCTGGTGGCTTCTGGTCGGATGACAGTTCAGATCCCCCAAAACACAAGGCTGGCGACCCAGTCCTTCATAATATTCATCCCCATCGCTACAAAGCATTCTTCTGCTTCAATGCATTCTCCTTCATGTCATCCATTGTTGTGATCATGCTTCTGCTGAGCAAATCTGTCAGGGAGAAGAATGTACCACTTGGGGTATTGCACTTGATCATGATACTAGATTTGCTGGCTCTCATGACGGCTTTCGCTGCGGGAAGCTGCAGGAAATTCAGGACCTCAGTTTATGTCTATGGTCTAGTAATCGGTGTCACAATATACCTTCTGTTGGTGACCATTTTAGCAAGTAGCATCGCGAAATGTCTGAGATCAAGGAAGATAAGTAAGAATTCCTATGAGAAGCATCATGAACATCCTTCAAGAGTAAACACACTGCCACTTAAACAACAAGTTTGA
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| Protein seq | MENGRQPKLTIALTNTTDVLIPVNGQSEENNTNGDRAEYGMETGSDRQDSMNGLSSRFLLASSHAPSITVDFELLWRLRKYLVMLAILAVSVTYNAGLTPPGGFRTKNTTNGRDAGEPLLRVYFFPRYEVFFYCNATAFAASLVLIILLLSKSVTRQNLWLRSMQFTMILDLFSLMGAYAAGSCRAVKSSIYIWVLVVAVFIYVGIHILLCTRIFPKWLKERVQMLLQKIQAKWGVHEENRSNDQKRNIEEARKFILTLATFSATITYQAGLSPPGGFWTEGSSHPATPILRSNYLLRYNFFMSCNATSFVASLVTIMLLLSPELSMHGIRSKAVIVCVVADLLGLIGAYAAGSCRDIAVSFYVMSVSIIVLTCFVVLAGILVYKPVADWLQKIKPDTLTCIGTIGRVFSLDFKRNRSIDREQENSQANHLQTELEPDAQVKENALQSTDIEEGESHAKNQPSGECQSANSEEAEPDSDHPSAGYQQSMCSTDVVYNLQGQSIDDQAQPTAEESISNTQHPSEKSQHATNYKDGMHQSADNQQDANTKENSSSIDDFKTLKDGISDPEPQSADSHQVTDMKEQSTMTNDLKTTDTEGSMPDPDNRSTDSQHVINKMEQSSSTDEPGTVVTPEEKVSPNVPVGHSEIEIAEDNKIAPHVENGYIDKNERSPNEDGNRNQTAKHLKKCRTYLLLLAILAVSLTYQSGLNPPGGFWTRHEDYHSSGDHILEDTHHPRYIAFFYLNAIAFVASVVMIIMLLNRRMANKVIKRRALQIAMIVILLSLTGAYVMGSCRKTKNSVYISVMVLLVLAYVGIHVLIAIHVIPEGWKRQVAEKLNRLSCRHLWSPLHGSNQTGHGNEKDWERRRNLLLILSILAATVTYQAGMNPPGSVWSDDKDINRTLTGNPVLQENNLRRYNVFYYSNSVSFVSSVVITILLVNKGSCEHGMKFYALRVCLAAGLVGLLIAYAAGSCRKAKQSIYLIIVAVAVLISLMIQVFIMSSTYDKLGKPLCKCMESLLEWIFQTKEVRQDIGSEIQGSPDPGDKSERKRHKYLMLLSILAASITYQAGLNPPGGFWSDDSSDPPKHKAGDPVLHNIHPHRYKAFFCFNAFSFMSSIVVIMLLLSKSVREKNVPLGVLHLIMILDLLALMTAFAAGSCRKFRTSVYVYGLVIGVTIYLLLVTILASSIAKCLRSRKISKNSYEKHHEHPSRVNTLPLKQQV |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os06g0292400 | Os06t0292400-00 | Chr06 | 10738687 | 10742348 | - | irgsp1_rep | ||
| CDS seq | ATGGAAAATGGAAGGCAACCCAAGCTCACCATTGCTCTGACCAATACCACAGATGTCCTAATACCAGTCAATGGACAGAGTGAAGAAAACAACACCAATGGGGATAGGGCAGAGTATGGCATGGAAACTGGCAGCGACAGGCAAGACTCCATGAATGGTTTGTCCAGTAGGTTTTTATTGGCCAGTAGCCATGCACCCAGCATCACAGTTGATTTTGAGCTCTTGTGGAGACTGCGGAAGTACCTTGTAATGCTTGCAATCTTAGCAGTCAGTGTGACATATAATGCTGGATTAACCCCACCGGGTGGATTTCGGACAAAAAACACGACTAATGGACGTGATGCTGGTGAACCTCTCCTTCGTGTTTACTTCTTCCCACGGTATGAGGTATTCTTTTACTGCAATGCAACAGCCTTTGCTGCATCTCTTGTCTTAATCATATTGCTTCTAAGTAAGAGTGTGACGAGGCAGAATTTGTGGCTCCGTTCAATGCAATTTACCATGATATTAGACCTATTCAGCTTGATGGGAGCCTATGCTGCTGGAAGCTGCAGGGCAGTAAAGTCTTCCATTTATATATGGGTCCTAGTTGTTGCTGTTTTCATATATGTTGGAATTCACATTTTGTTATGCACAAGGATATTTCCAAAATGGTTGAAAGAGAGAGTACAAATGCTGCTACAGAAAATTCAAGCAAAGTGGGGTGTACATGAGGAGAACAGGAGCAACGATCAAAAAAGAAACATTGAGGAGGCTCGCAAGTTCATTTTGACACTTGCAACTTTTTCTGCAACTATCACTTACCAAGCAGGATTAAGTCCACCAGGTGGTTTTTGGACTGAAGGCAGCAGTCATCCAGCAACCCCTATTCTTCGGAGTAACTATCTTCTTCGGTATAATTTTTTCATGAGTTGCAATGCAACTTCATTTGTGGCATCTTTGGTCACAATCATGTTGCTTCTTAGCCCAGAATTGAGCATGCATGGAATAAGATCTAAAGCAGTTATTGTGTGTGTGGTAGCTGACCTATTGGGCCTGATAGGTGCGTATGCTGCAGGAAGCTGTAGAGATATAGCAGTTTCTTTCTATGTTATGTCTGTTTCCATCATAGTCTTGACCTGCTTTGTGGTTTTGGCTGGAATCTTGGTTTACAAACCTGTCGCAGATTGGCTACAAAAGATCAAACCAGACACTCTGACATGCATTGGTACAATTGGCCGGGTTTTTTCATTGGATTTTAAGAGAAACAGATCAATTGATAGAGAACAAGAAAATTCTCAAGCAAATCATCTGCAAACGGAGCTTGAACCAGATGCACAAGTAAAAGAAAATGCTCTGCAAAGTACAGATATTGAAGAGGGAGAGTCACATGCGAAGAATCAGCCTTCTGGCGAATGTCAATCTGCAAATTCCGAGGAGGCTGAGCCTGACTCTGACCATCCATCGGCCGGTTATCAGCAATCTATGTGTAGCACAGATGTTGTGTACAACCTGCAGGGTCAGTCTATAGACGACCAAGCCCAACCAACCGCAGAGGAATCTATATCCAACACACAGCACCCATCTGAAAAAAGTCAACATGCTACAAACTATAAGGACGGTATGCATCAATCTGCAGACAATCAGCAAGATGCAAATACAAAGGAAAATTCTTCATCAATCGATGATTTCAAGACACTTAAGGATGGTATTTCTGACCCTGAGCCTCAATCTGCAGATAGCCATCAAGTTACAGATATGAAGGAACAATCCACAATGACTAACGACTTAAAGACTACAGATACTGAAGGCAGTATGCCTGACCCTGACAATCGATCTACAGACAGCCAGCATGTTATAAATAAAATGGAACAATCTTCGTCGACTGATGAACCTGGGACTGTTGTTACACCAGAAGAGAAAGTATCTCCTAATGTGCCTGTGGGACATAGTGAGATTGAAATTGCTGAAGATAATAAAATTGCTCCACATGTTGAGAATGGCTATATTGACAAGAATGAAAGATCTCCCAATGAAGATGGCAATAGAAATCAAACTGCTAAGCATCTGAAGAAGTGCCGCACATATCTACTCCTCCTTGCGATTCTTGCAGTATCTCTGACATACCAATCAGGTCTGAATCCACCAGGCGGCTTCTGGACAAGACACGAGGATTATCATTCATCTGGTGATCACATCCTTGAGGACACTCACCACCCTCGCTATATTGCATTCTTCTATCTAAATGCAATTGCCTTTGTTGCATCCGTTGTCATGATCATTATGCTCCTGAACAGAAGAATGGCCAACAAGGTTATAAAACGGCGTGCACTGCAGATAGCAATGATAGTGATCCTCCTGTCCTTAACAGGGGCTTATGTTATGGGAAGCTGTAGGAAGACAAAGAATTCAGTTTATATCTCAGTGATGGTACTCCTCGTGCTTGCTTATGTTGGTATTCATGTTTTGATAGCAATTCATGTAATCCCAGAAGGTTGGAAAAGGCAGGTGGCAGAAAAGCTAAACCGCCTCTCGTGCAGACATTTGTGGTCGCCTCTCCATGGCAGCAACCAGACAGGGCATGGCAATGAGAAGGATTGGGAGCGAAGGCGCAATCTACTATTGATTCTTTCTATTCTCGCTGCGACTGTCACATACCAAGCTGGCATGAACCCTCCAGGAAGTGTATGGTCTGATGACAAGGATATCAACCGCACCCTTACAGGCAACCCAGTCCTTCAGGAGAACAATTTAAGACGCTATAATGTGTTCTACTACTCAAATTCAGTCTCATTCGTGTCATCTGTTGTCATCACAATACTACTCGTGAACAAGGGATCCTGTGAGCATGGTATGAAGTTCTATGCATTGCGAGTGTGTTTGGCAGCAGGATTGGTTGGCCTCTTGATTGCTTATGCTGCAGGAAGCTGCAGGAAAGCAAAACAATCTATTTATCTCATCATCGTTGCTGTTGCAGTTCTGATCTCCCTTATGATTCAAGTCTTCATTATGTCTTCAACATATGATAAACTAGGAAAGCCATTGTGCAAGTGTATGGAAAGTTTGCTTGAGTGGATTTTTCAGACTAAGGAGGTTAGGCAAGATATTGGTTCTGAGATCCAAGGAAGTCCAGATCCTGGTGACAAAAGTGAAAGAAAAAGACACAAGTATCTGATGTTGCTTTCAATTTTGGCGGCCTCCATCACATACCAAGCTGGTCTGAACCCACCTGGTGGCTTCTGGTCGGATGACAGTTCAGATCCCCCAAAACACAAGGCTGGCGACCCAGTCCTTCATAATATTCATCCCCATCGCTACAAAGCATTCTTCTGCTTCAATGCATTCTCCTTCATGTCATCCATTGTTGTGATCATGCTTCTGCTGAGCAAATCTGTCAGGGAGAAGAATGTACCACTTGGGGTATTGCACTTGATCATGATACTAGATTTGCTGGCTCTCATGACGGCTTTCGCTGCGGGAAGCTGCAGGAAATTCAGGACCTCAGTTTATGTCTATGGTCTAGTAATCGGTGTCACAATATACCTTCTGTTGGTGACCATTTTAGCAAGTAGCATCGCGAAATGTCTGAGATCAAGGAAGATAAGTAAGAATTCCTATGAGAAGCATCATGAACATCCTTCAAGAGTAAACACACTGCCACTTAAACAACAAGTTTGA
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| Protein seq | MENGRQPKLTIALTNTTDVLIPVNGQSEENNTNGDRAEYGMETGSDRQDSMNGLSSRFLLASSHAPSITVDFELLWRLRKYLVMLAILAVSVTYNAGLTPPGGFRTKNTTNGRDAGEPLLRVYFFPRYEVFFYCNATAFAASLVLIILLLSKSVTRQNLWLRSMQFTMILDLFSLMGAYAAGSCRAVKSSIYIWVLVVAVFIYVGIHILLCTRIFPKWLKERVQMLLQKIQAKWGVHEENRSNDQKRNIEEARKFILTLATFSATITYQAGLSPPGGFWTEGSSHPATPILRSNYLLRYNFFMSCNATSFVASLVTIMLLLSPELSMHGIRSKAVIVCVVADLLGLIGAYAAGSCRDIAVSFYVMSVSIIVLTCFVVLAGILVYKPVADWLQKIKPDTLTCIGTIGRVFSLDFKRNRSIDREQENSQANHLQTELEPDAQVKENALQSTDIEEGESHAKNQPSGECQSANSEEAEPDSDHPSAGYQQSMCSTDVVYNLQGQSIDDQAQPTAEESISNTQHPSEKSQHATNYKDGMHQSADNQQDANTKENSSSIDDFKTLKDGISDPEPQSADSHQVTDMKEQSTMTNDLKTTDTEGSMPDPDNRSTDSQHVINKMEQSSSTDEPGTVVTPEEKVSPNVPVGHSEIEIAEDNKIAPHVENGYIDKNERSPNEDGNRNQTAKHLKKCRTYLLLLAILAVSLTYQSGLNPPGGFWTRHEDYHSSGDHILEDTHHPRYIAFFYLNAIAFVASVVMIIMLLNRRMANKVIKRRALQIAMIVILLSLTGAYVMGSCRKTKNSVYISVMVLLVLAYVGIHVLIAIHVIPEGWKRQVAEKLNRLSCRHLWSPLHGSNQTGHGNEKDWERRRNLLLILSILAATVTYQAGMNPPGSVWSDDKDINRTLTGNPVLQENNLRRYNVFYYSNSVSFVSSVVITILLVNKGSCEHGMKFYALRVCLAAGLVGLLIAYAAGSCRKAKQSIYLIIVAVAVLISLMIQVFIMSSTYDKLGKPLCKCMESLLEWIFQTKEVRQDIGSEIQGSPDPGDKSERKRHKYLMLLSILAASITYQAGLNPPGGFWSDDSSDPPKHKAGDPVLHNIHPHRYKAFFCFNAFSFMSSIVVIMLLLSKSVREKNVPLGVLHLIMILDLLALMTAFAAGSCRKFRTSVYVYGLVIGVTIYLLLVTILASSIAKCLRSRKISKNSYEKHHEHPSRVNTLPLKQQV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0292400 | RBH | 0.866262 | 1.310147 | 2.101061 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g18900 | RBH | 0.586613 | 0.578195 | 0.466906 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0012010 | RBH | 0.347383 | 15.019578 | 3.504500 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0011870 | SBH | 0.156056 | 1.828920 | 1.609057 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0011920 | RBH | 0.590701 | 7.363358 | 5.843678 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0011970 | RBH | 0.018318 | 0.098438 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0012080 | RBH | 4.443593 | 3.267327 | 6.455762 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0176900 | SBH | 4.1231745 | 0.305001 | 0.0181225 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0011540 | RBH | 0.037114 | 0.514020 | 0.867945 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0171700 | RBH | 1.6993565 | 6.0598675 | 11.9023605 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0012110 | RBH | 0.165771 | 0.288628 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0011950 | RBH | 0.181585 | 5.041752 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0011790 | RBH | 0.000000 | 5.054701 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0012170 | RBH | 0.048456 | 0.242507 | 0.107409 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0011830 | RBH | 0.064570 | 4.197367 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G011720 | RBH | 0.160960 | 1.068300 | 0.772654 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0012060 | RBH | 0.731656 | 5.013241 | 3.029638 |
