Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
Os05g0140100 | OGI:05006710 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr05:2311396-2315442 | ||||||||
Gene Symbol | R2R3-MYB, OsMYB55/61-L, MYB55/61-L, OsMYB55, OsMYB61-L, MYB55, MYB61-L, OsMYB61L, MYB61L, OsMYB61b, MYB61b, OsMYB2P-1 | ||||||||||
DNA seq | AGAGAAGGTCAGGCTGTCACCAGAAAGTCCTTTTTCCCCGGCTAGCTCCTGCATGCAGCTGATGAGCGTCCTGCATGGAGAAGAAAAGAACAGATGGTGACACTGAATTCCAAGAGTGAGTATCACTTTTATTTTAATTGATACATACTACATACATACAGACACCGGCGATGTGCTAATTGCTCCAAAAATCTCCAGAAAAAACATATAGTACAAATGCATATATACCACAACAGACAATGCAAGCCTCCAGAACGGATGGGATCCGTCTGCATGAGGAATCAAAGGACAAGGATGATCAGCTGGAAACCAGATTATAAAATCATCAATCAATGCCTTTTGATTCGCCGCGCGCTTGTTTAATGTTTAATGGGGGGGATGAGTATCCGCTGTCACATGGGCACAGGAGGGGGGATGGATGCCATTACAATCCTAATCATGGAATCATGGATTAAACTTTTCCCCCTTTTCCTTTCATCAGGATACCAGGCCATAATACTTGCATTGACTAGCTCATTTGGGATGAATACTATAACTCCAAATGTTTTTGTCTCTGTCCTCCAGGCCCTTGCATCTTTTCTTTTCTTTTTTTCCAGTACTTCTAAATTCCAAGAAACACAACCGGCCTCTCCACAATGATCAATCGATCGACCGATCGGTGTTCCCATTGACGGCAGAGACAGTCAGCAGACAAATCATTATTCCTGTACCTGCGCAATTATCTGTGCAATTATGGGGAAGCTCACCGTTCTGAAGAACTGATCACCACAGACACGCTCAACGTGCTTCATCTCGGATTGGAGAAGCAGATACGGATTTCCGAATGAAAATTGCTAGGGTATCTAGCTGCATGCCCATGGTAAACAAAGGGGAGAAGATGCCCTCTGTCCTGGAATACCAACATCTGATGCCACCACTTCTTTTTCCCCAGGACCCCAACTGTGATGATTGACGGGGAGCTTTTCCACAGAGACAAGTGATCCAGTGACTTACCTGAAAAGCAAGAGAAATAAAGGACAATACTTAGGTCTGACACATAAAATCTTGCAGGTGGGAGAAAATGAGGTGCACATGCACGCACGCACGCACAGCACAACACAGCACAGCAGCTAACAAAATTGGGACTTAATTGGCAACAGAAGAAAGGTGGACATGGCCTCCCAGTCCCAGCACTCCAGCAGTAGTCTGCTGCTTTCTTTGCCCCTGCATGAAACACTCGTGATGTACAAGTAGCTGCAGGAAAGAAAATAAAAGGAGAGGAAAAAAGGATTTAAAAGAGAGAAAATTTCTGATTTCTAGTAGAAAATGGTGTACTGGCTGGGTCGCAGTCAATCAACATGGGAGCAAGAACATCAGTCCTTGTCCTAATAATGTAAACCCTGATGGACTGGTTTTACTTTCACTTGCTGACTGATTCTCATCAAACAAGTACACTGGAAATGGGAAACGAGATAAAAGGAAAAAAAAAAAGGCGAAGAAGGAAGAAGATGGAACAGTTTTTTGTACAAGGCCGCGACAATTAAAATATCGGTGGAGACGGACGGCAACCCCACCAGTTTTGGCACCGGACATAGATTCTTAGGAGATGACGAGACAGACCCCCCACACGCACAGCCAGGAAGCAACCAAGGCAAGGGGTTAAACCTCCCTTCTCACAACCACCACCACCACCACCACCACCTTTAAAAGAAGGTGCTAAAGGGGGTGTCCTGCAAAGAAAAGGAGAGGAGTGCCCCCTAACCTTTCCCTGCTTTCCACTGAAATCTCCTATCCGCAACCATACAGTTGCTCAATTCTGGTCTCAGCCAAAGCCCCAATCATTCATCGTTATATAGGTCACTATACCCTCCCTTGCATTTCCCACCACCACCCCTTGAAGCCATGAATCGCTGAAGAAGTCGTCTGCGCTACTGCTACCACCGGGGAAGGATTAGCTGCGCAGAATTGTGCGAGCGAAGCCTGCCAGCCGTGCGAATTTCAAGCTCCGAGGTCCTGCATTGCACTGAAATGGGGAGGCATTCTTGCTGCTACAAGCAGAAATTGAGGAAGGGGCTCTGGTCCCCTGAGGAGGATGAGAAGCTCATGAATCACATAACCAAGCATGGCCATGGCTGCTGGAGTTCTGTTCCTAAACTTGCAGGTGAGCTCAAACAAGTCTTCTGCATTTCCTCGTTTATACCAGCTTCCGATTCTTCTCTTATCTCTTCTCCAACAATTCTACTCCCTGAATTGGTCCAAAATTCTAAATTTCTTCCTGGTGAATTGTTGCAGGGCTCCAAAGATGCGGCAAGAGCTGCAGGCTGAGGTGGATAAACTATCTGAGGCCTGACCTCAAGAGAGGTGCATTCTCTCAGGAGGAAGAAGACCTCATCATTGAGCTCCATGCTGTCCTTGGGAACAGGTAAACTTCAATCTCAATTGGCACTACCAAAATTCAGGACTAGTAACTGCAAGGCAACACTTTGATACATCAACTAACACAGCCCTTCTATTTTTCCATGAGAAGGTGGTCTCAGATTGCAGCTCAGCTGCCTGGGAGGACTGACAACGAGATCAAGAATCTCTGGAATTCTTGCATCAAGAAGAAGCTCCGGCAGAAAGGCATTGATCCCAACACCCACAAGCCCCTCACCGAGGCTGATCGCAGGGGAGCAGCACCCACAGTCAGCACCGAGAGGACCTCAGGGTCCAGCGACGTCAACCCGTCAAGTGCTGGTGCTCTAGGGAACTTGAGCCACCTCCTCAGCGAGACAGCACAATCATCAATGCTGCTGCCGGTGTATGATAAGAATCACCCTGAAACTGCAAGCTTGCCACGCCCTAAGGTGCCACCAAAGGAGTTGTTTCTTGACCAGCTTACTGCCGGTCACGAGAGCCCATCAAGTTGCCGCTCATCAGGTCCAACCCTGTATTTTCCTTTCCAGCAACCATTAGGCTACAGTAATGAATGTGGCACTGGGGATGGTGCGAGTATGAATTCACTCTGGTTCAACCAGAATGATTTCAACTGCAGCACAATCTCCACCGTGATGCCACCAGTTTCACCATCAGCCCTCTCAACATCAATGGGGCTGAATCTTCCCCCAGAAAATCCTCGTCACGGAGGCACTGGCATTGGCAACACCCCGTTCTACTGGGATGGTTCCAATCCTAGCAGCAGCGGCAGTACTGGGAGCAGCGGAAGCAACAGTATGGGATTCGAGCCACAGAGCACAACCTCAATTTTGGAGAACAGTGTATTCCCATGGACAGATATCGGACAAGAGAAAGATACCAGAGTTCACTTAGTGGAGGAACTCAAGTGGCCTGATTTGCTCCATGGAACCTTTGCTGAGGCGACGACAGCCATGCAGAACCAGAGCCAATCATTATACGATGATGTGATCAAGGCAGAGAGCCAATTCAACATGGAAGGGATATGTGCCTCTTGGTTCCAGAATCAGCAACCACAACAACAGCTGCAAGCAGCATCAGACATGTATGATAAAGACTTGCAAAGATTGCCCTTGTCTTTTGAACATATCTAGGTGCAATGCTACGCCATGCATGGAACAGAGCAGAGATCAGAAGAAGCAGAAACTTGTAACTCTCGCATATTGATTGGCAGGCAAAACACTGAAGTGTTTGATGTTTTGACACAGAATCGACCTCAACACTTTCTCCTCACTTAAAGATCCTACAGTGTCATGGAAAAGACAGCTCTGGCCTTACGAGTAGCAGAAGAAGGGATAGAAAAGTACGTTCTAGAGTCTCCCTCTTTTCTCTTGAAATTTGCTGTTTTTTGTACACGACAACTCAACTTTTGGATACTTGAGTTTTGGTTCACTCTGTTTATCAAATAAATATAGACACGCATGGGCAAAACATGTGTCGGTAGCTCTCACAAACCATACAAGTAGTCCCAAGCTTTTCAACTGCTACCATGCACGTACATGCAAATTAATTATTGCATGTTGTATTTTTATTTCTTTTGAGAAGTTGCCGACAAAGTGCAGTTGTATATTTGTAAAGGAAAAAAATTGGAACATTGACCCAAGAGTTATTTTC
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CDS seq | ATGGGGAGGCATTCTTGCTGCTACAAGCAGAAATTGAGGAAGGGGCTCTGGTCCCCTGAGGAGGATGAGAAGCTCATGAATCACATAACCAAGCATGGCCATGGCTGCTGGAGTTCTGTTCCTAAACTTGCAGGGCTCCAAAGATGCGGCAAGAGCTGCAGGCTGAGGTGGATAAACTATCTGAGGCCTGACCTCAAGAGAGGTGCATTCTCTCAGGAGGAAGAAGACCTCATCATTGAGCTCCATGCTGTCCTTGGGAACAGGTGGTCTCAGATTGCAGCTCAGCTGCCTGGGAGGACTGACAACGAGATCAAGAATCTCTGGAATTCTTGCATCAAGAAGAAGCTCCGGCAGAAAGGCATTGATCCCAACACCCACAAGCCCCTCACCGAGGCTGATCGCAGGGGAGCAGCACCCACAGTCAGCACCGAGAGGACCTCAGGGTCCAGCGACGTCAACCCGTCAAGTGCTGGTGCTCTAGGGAACTTGAGCCACCTCCTCAGCGAGACAGCACAATCATCAATGCTGCTGCCGGTGTATGATAAGAATCACCCTGAAACTGCAAGCTTGCCACGCCCTAAGGTGCCACCAAAGGAGTTGTTTCTTGACCAGCTTACTGCCGGTCACGAGAGCCCATCAAGTTGCCGCTCATCAGGTCCAACCCTGTATTTTCCTTTCCAGCAACCATTAGGCTACAGTAATGAATGTGGCACTGGGGATGGTGCGAGTATGAATTCACTCTGGTTCAACCAGAATGATTTCAACTGCAGCACAATCTCCACCGTGATGCCACCAGTTTCACCATCAGCCCTCTCAACATCAATGGGGCTGAATCTTCCCCCAGAAAATCCTCGTCACGGAGGCACTGGCATTGGCAACACCCCGTTCTACTGGGATGGTTCCAATCCTAGCAGCAGCGGCAGTACTGGGAGCAGCGGAAGCAACAGTATGGGATTCGAGCCACAGAGCACAACCTCAATTTTGGAGAACAGTGTATTCCCATGGACAGATATCGGACAAGAGAAAGATACCAGAGTTCACTTAGTGGAGGAACTCAAGTGGCCTGATTTGCTCCATGGAACCTTTGCTGAGGCGACGACAGCCATGCAGAACCAGAGCCAATCATTATACGATGATGTGATCAAGGCAGAGAGCCAATTCAACATGGAAGGGATATGTGCCTCTTGGTTCCAGAATCAGCAACCACAACAACAGCTGCAAGCAGCATCAGACATGTATGATAAAGACTTGCAAAGATTGCCCTTGTCTTTTGAACATATCTAG
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Protein seq | MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADRRGAAPTVSTERTSGSSDVNPSSAGALGNLSHLLSETAQSSMLLPVYDKNHPETASLPRPKVPPKELFLDQLTAGHESPSSCRSSGPTLYFPFQQPLGYSNECGTGDGASMNSLWFNQNDFNCSTISTVMPPVSPSALSTSMGLNLPPENPRHGGTGIGNTPFYWDGSNPSSSGSTGSSGSNSMGFEPQSTTSILENSVFPWTDIGQEKDTRVHLVEELKWPDLLHGTFAEATTAMQNQSQSLYDDVIKAESQFNMEGICASWFQNQQPQQQLQAASDMYDKDLQRLPLSFEHI |
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Function | Transcription factor MYB61 [UniProtKB/Swiss-Prot:Q8VZQ2] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
Os05g0140100 | Os05t0140100-01 | Chr05 | 2311396 | 2315429 | + | irgsp1_rep | ||
CDS seq | ATGGGGAGGCATTCTTGCTGCTACAAGCAGAAATTGAGGAAGGGGCTCTGGTCCCCTGAGGAGGATGAGAAGCTCATGAATCACATAACCAAGCATGGCCATGGCTGCTGGAGTTCTGTTCCTAAACTTGCAGGGCTCCAAAGATGCGGCAAGAGCTGCAGGCTGAGGTGGATAAACTATCTGAGGCCTGACCTCAAGAGAGGTGCATTCTCTCAGGAGGAAGAAGACCTCATCATTGAGCTCCATGCTGTCCTTGGGAACAGGTGGTCTCAGATTGCAGCTCAGCTGCCTGGGAGGACTGACAACGAGATCAAGAATCTCTGGAATTCTTGCATCAAGAAGAAGCTCCGGCAGAAAGGCATTGATCCCAACACCCACAAGCCCCTCACCGAGGCTGATCGCAGGGGAGCAGCACCCACAGTCAGCACCGAGAGGACCTCAGGGTCCAGCGACGTCAACCCGTCAAGTGCTGGTGCTCTAGGGAACTTGAGCCACCTCCTCAGCGAGACAGCACAATCATCAATGCTGCTGCCGGTGTATGATAAGAATCACCCTGAAACTGCAAGCTTGCCACGCCCTAAGGTGCCACCAAAGGAGTTGTTTCTTGACCAGCTTACTGCCGGTCACGAGAGCCCATCAAGTTGCCGCTCATCAGGTCCAACCCTGTATTTTCCTTTCCAGCAACCATTAGGCTACAGTAATGAATGTGGCACTGGGGATGGTGCGAGTATGAATTCACTCTGGTTCAACCAGAATGATTTCAACTGCAGCACAATCTCCACCGTGATGCCACCAGTTTCACCATCAGCCCTCTCAACATCAATGGGGCTGAATCTTCCCCCAGAAAATCCTCGTCACGGAGGCACTGGCATTGGCAACACCCCGTTCTACTGGGATGGTTCCAATCCTAGCAGCAGCGGCAGTACTGGGAGCAGCGGAAGCAACAGTATGGGATTCGAGCCACAGAGCACAACCTCAATTTTGGAGAACAGTGTATTCCCATGGACAGATATCGGACAAGAGAAAGATACCAGAGTTCACTTAGTGGAGGAACTCAAGTGGCCTGATTTGCTCCATGGAACCTTTGCTGAGGCGACGACAGCCATGCAGAACCAGAGCCAATCATTATACGATGATGTGATCAAGGCAGAGAGCCAATTCAACATGGAAGGGATATGTGCCTCTTGGTTCCAGAATCAGCAACCACAACAACAGCTGCAAGCAGCATCAGACATGTATGATAAAGACTTGCAAAGATTGCCCTTGTCTTTTGAACATATCTAG
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Protein seq | MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADRRGAAPTVSTERTSGSSDVNPSSAGALGNLSHLLSETAQSSMLLPVYDKNHPETASLPRPKVPPKELFLDQLTAGHESPSSCRSSGPTLYFPFQQPLGYSNECGTGDGASMNSLWFNQNDFNCSTISTVMPPVSPSALSTSMGLNLPPENPRHGGTGIGNTPFYWDGSNPSSSGSTGSSGSNSMGFEPQSTTSILENSVFPWTDIGQEKDTRVHLVEELKWPDLLHGTFAEATTAMQNQSQSLYDDVIKAESQFNMEGICASWFQNQQPQQQLQAASDMYDKDLQRLPLSFEHI
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
Os05g0140100 | Os05t0140100-02 | Chr05 | 2313002 | 2315442 | + | irgsp1_rep | ||
CDS seq | ATGGGGAGGCATTCTTGCTGCTACAAGCAGAAATTGAGGAAGGGGCTCTGGTCCCCTGAGGAGGATGAGAAGCTCATGAATCACATAACCAAGCATGGCCATGGCTGCTGGAGTTCTGTTCCTAAACTTGCAGGGCTCCAAAGATGCGGCAAGAGCTGCAGGCTGAGGTGGATAAACTATCTGAGGCCTGACCTCAAGAGAGGTGCATTCTCTCAGGAGGAAGAAGACCTCATCATTGAGCTCCATGCTGTCCTTGGGAACAGGTGGTCTCAGATTGCAGCTCAGCTGCCTGGGAGGACTGACAACGAGATCAAGAATCTCTGGAATTCTTGCATCAAGAAGAAGCTCCGGCAGAAAGGCATTGATCCCAACACCCACAAGCCCCTCACCGAGGCTGATCGCAGGGGAGCAGCACCCACAGTCAGCACCGAGAGGACCTCAGGGTCCAGCGACGTCAACCCGTCAAGTGCTGGTGCTCTAGGGAACTTGAGCCACCTCCTCAGCGAGACAGCACAATCATCAATGCTGCTGCCGGTGTATGATAAGAATCACCCTGAAACTGCAAGCTTGCCACGCCCTAAGGTGCCACCAAAGGAGTTGTTTCTTGACCAGCTTACTGCCGGTCACGAGAGCCCATCAAGTTGCCGCTCATCAGGTCCAACCCTGTATTTTCCTTTCCAGCAACCATTAGGCTACAGTAATGAATGTGGCACTGGGGATGGTGCGAGTATGAATTCACTCTGGTTCAACCAGAATGATTTCAACTGCAGCACAATCTCCACCGTGATGCCACCAGTTTCACCATCAGCCCTCTCAACATCAATGGGGCTGAATCTTCCCCCAGAAAATCCTCGTCACGGAGGCACTGGCATTGGCAACACCCCGTTCTACTGGGATGGTTCCAATCCTAGCAGCAGCGGCAGTACTGGGAGCAGCGGAAGCAACAGTATGGGATTCGAGCCACAGAGCACAACCTCAATTTTGGAGAACAGTGTATTCCCATGGACAGATATCGGACAAGAGAAAGATACCAGAGTTCACTTAGTGGAGGAACTCAAGTGGCCTGATTTGCTCCATGGAACCTTTGCTGAGGCGACGACAGCCATGCAGAACCAGAGCCAATCATTATACGATGATGTGATCAAGGCAGAGAGCCAATTCAACATGGAAGGGATATGTGCCTCTTGGTTCCAGAATCAGCAACCACAACAACAGCTGCAAGCAGCATCAGACATGTATGATAAAGACTTGCAAAGATTGCCCTTGTCTTTTGAACATATCTAG
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Protein seq | MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADRRGAAPTVSTERTSGSSDVNPSSAGALGNLSHLLSETAQSSMLLPVYDKNHPETASLPRPKVPPKELFLDQLTAGHESPSSCRSSGPTLYFPFQQPLGYSNECGTGDGASMNSLWFNQNDFNCSTISTVMPPVSPSALSTSMGLNLPPENPRHGGTGIGNTPFYWDGSNPSSSGSTGSSGSNSMGFEPQSTTSILENSVFPWTDIGQEKDTRVHLVEELKWPDLLHGTFAEATTAMQNQSQSLYDDVIKAESQFNMEGICASWFQNQQPQQQLQAASDMYDKDLQRLPLSFEHI
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
Os05g0140100 | Os05t0140100-03 | Chr05 | 2313313 | 2315442 | + | irgsp1_rep | ||
CDS seq | ATGGGGAGGCATTCTTGCTGCTACAAGCAGAAATTGAGGAAGGGGCTCTGGTCCCCTGAGGAGGATGAGAAGCTCATGAATCACATAACCAAGCATGGCCATGGCTGCTGGAGTTCTGTTCCTAAACTTGCAGGGCTCCAAAGATGCGGCAAGAGCTGCAGGCTGAGGTGGATAAACTATCTGAGGCCTGACCTCAAGAGAGGTGCATTCTCTCAGGAGGAAGAAGACCTCATCATTGAGCTCCATGCTGTCCTTGGGAACAGGTGGTCTCAGATTGCAGCTCAGCTGCCTGGGAGGACTGACAACGAGATCAAGAATCTCTGGAATTCTTGCATCAAGAAGAAGCTCCGGCAGAAAGGCATTGATCCCAACACCCACAAGCCCCTCACCGAGGCTGATCGCAGGGGAGCAGCACCCACAGTCAGCACCGAGAGGACCTCAGGGTCCAGCGACGTCAACCCGTCAAGTGCTGGTGCTCTAGGGAACTTGAGCCACCTCCTCAGCGAGACAGCACAATCATCAATGCTGCTGCCGGTGTATGATAAGAATCACCCTGAAACTGCAAGCTTGCCACGCCCTAAGGTGCCACCAAAGGAGTTGTTTCTTGACCAGCTTACTGCCGGTCACGAGAGCCCATCAAGTTGCCGCTCATCAGGTCCAACCCTGTATTTTCCTTTCCAGCAACCATTAGGCTACAGTAATGAATGTGGCACTGGGGATGGTGCGAGTATGAATTCACTCTGGTTCAACCAGAATGATTTCAACTGCAGCACAATCTCCACCGTGATGCCACCAGTTTCACCATCAGCCCTCTCAACATCAATGGGGCTGAATCTTCCCCCAGAAAATCCTCGTCACGGAGGCACTGGCATTGGCAACACCCCGTTCTACTGGGATGGTTCCAATCCTAGCAGCAGCGGCAGTACTGGGAGCAGCGGAAGCAACAGTATGGGATTCGAGCCACAGAGCACAACCTCAATTTTGGAGAACAGTGTATTCCCATGGACAGATATCGGACAAGAGAAAGATACCAGAGTTCACTTAGTGGAGGAACTCAAGTGGCCTGATTTGCTCCATGGAACCTTTGCTGAGGCGACGACAGCCATGCAGAACCAGAGCCAATCATTATACGATGATGTGATCAAGGCAGAGAGCCAATTCAACATGGAAGGGATATGTGCCTCTTGGTTCCAGAATCAGCAACCACAACAACAGCTGCAAGCAGCATCAGACATGTATGATAAAGACTTGCAAAGATTGCCCTTGTCTTTTGAACATATCTAG
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Protein seq | MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADRRGAAPTVSTERTSGSSDVNPSSAGALGNLSHLLSETAQSSMLLPVYDKNHPETASLPRPKVPPKELFLDQLTAGHESPSSCRSSGPTLYFPFQQPLGYSNECGTGDGASMNSLWFNQNDFNCSTISTVMPPVSPSALSTSMGLNLPPENPRHGGTGIGNTPFYWDGSNPSSSGSTGSSGSNSMGFEPQSTTSILENSVFPWTDIGQEKDTRVHLVEELKWPDLLHGTFAEATTAMQNQSQSLYDDVIKAESQFNMEGICASWFQNQQPQQQLQAASDMYDKDLQRLPLSFEHI
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | None | None | None |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
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Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0140100 | RBH | 0.197155 | 0.134792 | 2.322661 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g04820 | RBH | 0.132790 | 0.090294 | 0.595493 |
Nipponbare | IRGSP 1.0 | RAP-db | Os01g0285300 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0002810 | RBH | 0.0 | 5.903128 | 13.295396 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0002840 | RBH | 0.000000 | 4.613848 | 0.641171 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0002800 | RBH | 0.0 | 16.799282 | 9.676608 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0002870 | RBH | 0.0 | 1.070493 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0002870 | RBH | 0.000000 | 28.673101 | 10.575924 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0034500 | RBH | 7.920958 | 5.0134895 | 0.9836625 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0002680 | RBH | 0.000000 | 1.616526 | 0.477896 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0034500 | RBH | 14.8552265 | 0.1543335 | 3.1849715 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0002800 | RBH | 0.0 | 0.162489 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0002710 | RBH | 0.0 | 8.973114 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0002820 | RBH | 0.0 | 15.830653 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0002840 | RBH | 0.250783 | 0.920264 | 0.518869 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0002850 | RBH | 0.000000 | 15.769109 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G002730 | RBH | 0.000000 | 9.945308 | 6.709723 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0002890 | RBH | 0.0 | 31.113678 | 6.568886 |