Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os04g0570500 | OGI:04085100 | 11/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr04:28704161-28708189 | ||||||||
| Gene Symbol | DWF1, DIM/DWF1, DIM | ||||||||||
| DNA seq | GAAACTGAAGACACACGAGCTGTTTATTTCATAGTTACAATATAGATATCATACGCAACAAGTTATTGGGTTCACAATTTCTTTATTATTACAACAGTGGAATATCCAATAGGTATATTAAGTCTGAGGAACTAGTTGGATGTGATAGCCTTGAGGGAACATGATCTCTGATATGCGCAGTACTTCCCCTCCTTCAATCTCCGTCCAACTAAACGGAGAGTTCACCCGGCAAAAGAAAAGAAACAGAGTTCAACATGTATGTCAGTGAGTTTTTCTAAGACTATATCAGTGAGCATAGCAGGCAACAAACGAACATCAACATGCGTATGTACCTATACTCGGTCACCAAGATGTGGAGGAAGAGTGCAATGAAAAGCTTGCTAAACTCTGCCCCGAGACACAGCCTGACGCCTCCTCCAAATGGCATGTAATTTTTCAGCATCGAGCTTCTCTTCTCCTCCTGTATTTGCCATTTGCTTCAGTGAGTCAGATAGAAACATTGTGGTAAAACACAACACAAGTGAAGACCAATTTAACAACAATTCATCCTTGAATACTAATAGATCAATATTGAAATGTGTCTTCCACTAACCCTCCACCTCCATGGATCAAATTTAAGTGGATCCTCGAACAATTTTGGGTTTAGGTGAACTGCCATGGGGCTTATCATGACTAACCACCCGGATGGAATTGTATATCCTGTGTAAAAACCAAATATTATAATAACCATTTGTATGGCCTGATGTGATTCTCATGAGTAAATACTATGCTATATGCACAATATATTATCTTATTGTTTGTGTTAGAAGTTTACCTTTCACTTGCACATCTGTTAATGTTTTCCTGAAAACTCCAGGTGTGACGTTACTAATTCGAGTAATTTCATTCATAACCTTCAGGTAAAACAAGCTCAAATGAGTTAACAAAAGCAATTGCCGAAATCATCACTATGGCACCAATGATGCTTCAAACATAAGCGGACAACAACGTGAAATCACCTGAGTACTGAATTTCAAGGACCTGTACTCCTCCCATGTGAACCCGGAATTCACACCTTCTCGCTTCTTTAGAATTGTCCCGTGCTCCTCCTAGAATGATGTGTTAATTTTAGAATTCATCCAATATTTCATTATTTGTCTCGAACATAAACTACCCGCATTAAAAAAAATACAGACCTTGAGCTCTTCAACAACTTTTGGATTGTCGGTTAGGTACTTAAAAGCTACAGTCAAGGTTGATGACAGTGTTGCAAAGCTCGTAAACAAGAGCGCAGCAAGTGCGTCTATAGCAAAGTTTTCATCGATCATTGGCTTTTCGCTCTGTAGCTCTTCAACAATGAGGTCTACAAGGTCACCATACTTCTTTCCAGGTGCACTTAGCCTCTCTTTCATTATATCAGTAAGTGTGTTCCGCACATTTCTCCTACCCTTCATTAGGGAACAAAAAAATCAGGACAACTGAAACAAGTAATCTAGAAGACCAGTGTCCTAGTTAATATTCAGGACATGTATTTCTAATGAAGTAGATGAGTATACCCTGATTAAGCTATTTGGACAAGTAGGAAAGAAACCCGCGCAGATACACAGGAAACTTATTTATTATTCATAAAAAGAATGTTAAAGAAGTCATATCTCACCGTATTTACTATAAGAACTTTAAATTATCTTATAACAATAAAAGAAAAAATATCTCTACCATAAAATAGACCATAAACATTGATATCTTAAATGATAATAACATTTCTTATATTCAAACATTTTGTCCTGGTTATATGTAAACTCACATATTACCACTACTTATTACTTGTTTTCAAAGCAGGATGCATTTTTAATAGATGAAACTATATATGTAAAAAAAAAACACCTAGTACATCATTAATATAGAAAAAAATATCTCTCACCTATGTCTAAATCTTTGTGCAAATATTTAAAAATACAACAACTACCAATTAATGGGATAAACCCATTAAAATGTGTATAAATACCGCTCTAACGGATGAAACCGAGGGCTTTTTTTCTCTGATGCCTTGAAACATGAGTCTCGCATCAATGGAGTTGTACCCCTCGAGATTAGCGTGGATTATAATTTTAACGCCTAACTCACCATTGGCACACTGATAAAAGATTGCATTGTTAAGTACCCTGGTTACATCTTATTGGGGCCACTCAACTTAAGCATATGCATGCCCTTACTATACTTACGTCGGCGTAGAAAATTTCAATGCAATCCCCCCTGGCCCCCGGCCCCCGGCCCCCGCCCACACACACACACATAATGCATTTGTCATCCACCTAGTAAACTCTAATACATTGATTGTTTTAAAAATAGAAAATGAAGAAAAATGAAAAATGCCTTATATTTGAAAAGTGAGGGACTACATAAATTCAAATTGTGAATAGCTGGTTCTTGGATGGTTTTGTTGGTATTGATTCTGTAACTATAATTTTGTAGATGAGTTTGCTACCTGGGTCTAAATTCAGTGCCCGTTTGATTACACGCGTGTTGTGTTTCATCCAAATCTTCTTGTGACTTGTGAGATGGGTCGCTGTAATGGATCGACTGCATGTGCTGTCACGCTTGATGTGGAGAATGCTGAACATGATTTATAATTTTGCAGGGTAGGCTAAGATACATTTTTTTTGCCGGGTATTCCTTTTTTTTCTGGCGTTTTCTCTCTCCCACATACACGAGATCTAGAGGGATATGAGGAATTAGTTCCATAGATCTAATCTAATGCATGGTTGAATAAGATGGATCCACCAATTTAAGTGTAAATCAATGGTTTAGATATTTTTTAGAACTTTTCTAATTTATTAGACACGCGTGACGTCTTAGTAGCGTTTGTAGGAGTTTCACATGATGGCATGAGAGCATTTATAGTAAATTTAATGGACTTTTAGTATATAATAGAGGATACAAATACCTGCATGGATCGGTAGAATGATGTCCCTGGAAAATATATTGGGAAGGAAACCATCCCCTGAAAGAAGTCCTGAAAGTTCTTTCTCAATTCTCTTGAGTTGGTGACATCGAGTCCGATCAACTTCTTGGCAACTAGGTCAAAGATCATCTGCAAAATACAATTCATAGTAAAACAATAGGACCATTTTGTGAGACAGTTAACCGGAGATAATCTAATTACAGTGCGCACTTTGCGTTCTTAATTATCTACCATTTATTCATATTAGACATCTATAGATCCAACAACATTAGAAATGCCTTAACCGAAACATATATCCATGTAGCGTCGCATAGTTTTGCATAAATGCAGTTGTTAACTTACGTCTGACACGCCGTCCTGTACCTCGACGCTGGGTTTCCCAGTCCATGATGCGAAGCTCTCCCTCATAGAGTTTTCTAGCTCAGGAAGGAGTGATTCTTTCAGGTTTTCAAGGCCAAAGAGCTTGGCCGCGACACCCCGGATAAACTTGTGAATGGTTCCGTTGTATGTGGTGAGGCTCTTCTTGCCAAAGATATTAATTGCAGTTTCTGGATACCAACTTTGGAACAATTTACCCTCTTGTTGAAATATGAATCGGTTCACCTCTGGGTCAAGGGAAATGATCACTGGCCGTCCAACTAAGCTAGTCTTGAATAGAGGCCCATACCTGATGATCAAGCGCAAAACCAGCATGGCATAGAACTTAGATTTGTTCATATTTATAGAAAGTGTGTTGTTCGTATCAACAACGTGCATATGTTTGTTGCATATTTAAGTAGAACACTGGTACTAAAAAGTTATCACTAACCTCTCCAGTCTTTGCTTGTAGTAGCTTGGCATGTCTATTGATGGGCTTGCTCTGAAGAACTGGAAGGTCTCACCAATAATAGGGAAGCCCATGGAGCCAGGAGGAAGCCTCCCAATGCATGGAGGATTCATCCATTTGTATACCCAGTGAGCTAACCATCCTATGATGAGTGTGACACCACATAGAGCTGCATATGAATACGATCCTAGCAAGAGCTCAGACTTTTCCATGTCCTAGCTAACTAGTGAGCAAGTATGGAACAAGGCTTCTAGCTTGCACT
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| CDS seq | ATGGAAAAGTCTGAGCTCTTGCTAGGATCGTATTCATATGCAGCTCTATGTGGTGTCACACTCATCATAGGATGGTTAGCTCACTGGGTATACAAATGGATGAATCCTCCATGCATTGGGAGGCTTCCTCCTGGCTCCATGGGCTTCCCTATTATTGGTGAGACCTTCCAGTTCTTCAGAGCAAGCCCATCAATAGACATGCCAAGCTACTACAAGCAAAGACTGGAGAGGTATGGGCCTCTATTCAAGACTAGCTTAGTTGGACGGCCAGTGATCATTTCCCTTGACCCAGAGGTGAACCGATTCATATTTCAACAAGAGGGTAAATTGTTCCAAAGTTGGTATCCAGAAACTGCAATTAATATCTTTGGCAAGAAGAGCCTCACCACATACAACGGAACCATTCACAAGTTTATCCGGGGTGTCGCGGCCAAGCTCTTTGGCCTTGAAAACCTGAAAGAATCACTCCTTCCTGAGCTAGAAAACTCTATGAGGGAGAGCTTCGCATCATGGACTGGGAAACCCAGCGTCGAGGTACAGGACGGCGTGTCAGACATGATCTTTGACCTAGTTGCCAAGAAGTTGATCGGACTCGATGTCACCAACTCAAGAGAATTGAGAAAGAACTTTCAGGACTTCTTTCAGGGGATGGTTTCCTTCCCAATATATTTTCCAGGGACATCATTCTACCGATCCATGCAGGGTAGGAGAAATGTGCGGAACACACTTACTGATATAATGAAAGAGAGGCTAAGTGCACCTGGAAAGAAGTATGGTGACCTTGTAGACCTCATTGTTGAAGAGCTACAGAGCGAAAAGCCAATGATCGATGAAAACTTTGCTATAGACGCACTTGCTGCGCTCTTGTTTACGAGCTTTGCAACACTGTCATCAACCTTGACTGTAGCTTTTAAGTACCTAACCGACAATCCAAAAGTTGTTGAAGAGCTCAAGGAGGAGCACGGGACAATTCTAAAGAAGCGAGAAGGTGTGAATTCCGGGTTCACATGGGAGGAGTACAGGTCCTTGAAATTCAGTACTCAGGTTATGAATGAAATTACTCGAATTAGTAACGTCACACCTGGAGTTTTCAGGAAAACATTAACAGATGTGCAAGTGAAAGGATATACAATTCCATCCGGGTGGTTAGTCATGATAAGCCCCATGGCAGTTCACCTAAACCCAAAATTGTTCGAGGATCCACTTAAATTTGATCCATGGAGGTGGAGGGAGGAGAAGAGAAGCTCGATGCTGAAAAATTACATGCCATTTGGAGGAGGCGTCAGGCTGTGTCTCGGGGCAGAGTTTAGCAAGCTTTTCATTGCACTCTTCCTCCACATCTTGGTGACCGAGTATAGTTGGACGGAGATTGAAGGAGGGGAAGTACTGCGCATATCAGAGATCATGTTCCCTCAAGGCTATCACATCCAACTAGTTCCTCAGACTTAA
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| Protein seq | MEKSELLLGSYSYAALCGVTLIIGWLAHWVYKWMNPPCIGRLPPGSMGFPIIGETFQFFRASPSIDMPSYYKQRLERYGPLFKTSLVGRPVIISLDPEVNRFIFQQEGKLFQSWYPETAINIFGKKSLTTYNGTIHKFIRGVAAKLFGLENLKESLLPELENSMRESFASWTGKPSVEVQDGVSDMIFDLVAKKLIGLDVTNSRELRKNFQDFFQGMVSFPIYFPGTSFYRSMQGRRNVRNTLTDIMKERLSAPGKKYGDLVDLIVEELQSEKPMIDENFAIDALAALLFTSFATLSSTLTVAFKYLTDNPKVVEELKEEHGTILKKREGVNSGFTWEEYRSLKFSTQVMNEITRISNVTPGVFRKTLTDVQVKGYTIPSGWLVMISPMAVHLNPKLFEDPLKFDPWRWREEKRSSMLKNYMPFGGGVRLCLGAEFSKLFIALFLHILVTEYSWTEIEGGEVLRISEIMFPQGYHIQLVPQT |
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| Function | Cytochrome P450 87A3 [UniProtKB/Swiss-Prot:Q7XU38] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os04g0570500 | Os04t0570500-01 | Chr04 | 28704161 | 28708189 | - | irgsp1_rep | ||
| CDS seq | ATGGAAAAGTCTGAGCTCTTGCTAGGATCGTATTCATATGCAGCTCTATGTGGTGTCACACTCATCATAGGATGGTTAGCTCACTGGGTATACAAATGGATGAATCCTCCATGCATTGGGAGGCTTCCTCCTGGCTCCATGGGCTTCCCTATTATTGGTGAGACCTTCCAGTTCTTCAGAGCAAGCCCATCAATAGACATGCCAAGCTACTACAAGCAAAGACTGGAGAGGTATGGGCCTCTATTCAAGACTAGCTTAGTTGGACGGCCAGTGATCATTTCCCTTGACCCAGAGGTGAACCGATTCATATTTCAACAAGAGGGTAAATTGTTCCAAAGTTGGTATCCAGAAACTGCAATTAATATCTTTGGCAAGAAGAGCCTCACCACATACAACGGAACCATTCACAAGTTTATCCGGGGTGTCGCGGCCAAGCTCTTTGGCCTTGAAAACCTGAAAGAATCACTCCTTCCTGAGCTAGAAAACTCTATGAGGGAGAGCTTCGCATCATGGACTGGGAAACCCAGCGTCGAGGTACAGGACGGCGTGTCAGACATGATCTTTGACCTAGTTGCCAAGAAGTTGATCGGACTCGATGTCACCAACTCAAGAGAATTGAGAAAGAACTTTCAGGACTTCTTTCAGGGGATGGTTTCCTTCCCAATATATTTTCCAGGGACATCATTCTACCGATCCATGCAGGGTAGGAGAAATGTGCGGAACACACTTACTGATATAATGAAAGAGAGGCTAAGTGCACCTGGAAAGAAGTATGGTGACCTTGTAGACCTCATTGTTGAAGAGCTACAGAGCGAAAAGCCAATGATCGATGAAAACTTTGCTATAGACGCACTTGCTGCGCTCTTGTTTACGAGCTTTGCAACACTGTCATCAACCTTGACTGTAGCTTTTAAGTACCTAACCGACAATCCAAAAGTTGTTGAAGAGCTCAAGGAGGAGCACGGGACAATTCTAAAGAAGCGAGAAGGTGTGAATTCCGGGTTCACATGGGAGGAGTACAGGTCCTTGAAATTCAGTACTCAGGTTATGAATGAAATTACTCGAATTAGTAACGTCACACCTGGAGTTTTCAGGAAAACATTAACAGATGTGCAAGTGAAAGGATATACAATTCCATCCGGGTGGTTAGTCATGATAAGCCCCATGGCAGTTCACCTAAACCCAAAATTGTTCGAGGATCCACTTAAATTTGATCCATGGAGGTGGAGGGAGGAGAAGAGAAGCTCGATGCTGAAAAATTACATGCCATTTGGAGGAGGCGTCAGGCTGTGTCTCGGGGCAGAGTTTAGCAAGCTTTTCATTGCACTCTTCCTCCACATCTTGGTGACCGAGTATAGTTGGACGGAGATTGAAGGAGGGGAAGTACTGCGCATATCAGAGATCATGTTCCCTCAAGGCTATCACATCCAACTAGTTCCTCAGACTTAA
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| Protein seq | MEKSELLLGSYSYAALCGVTLIIGWLAHWVYKWMNPPCIGRLPPGSMGFPIIGETFQFFRASPSIDMPSYYKQRLERYGPLFKTSLVGRPVIISLDPEVNRFIFQQEGKLFQSWYPETAINIFGKKSLTTYNGTIHKFIRGVAAKLFGLENLKESLLPELENSMRESFASWTGKPSVEVQDGVSDMIFDLVAKKLIGLDVTNSRELRKNFQDFFQGMVSFPIYFPGTSFYRSMQGRRNVRNTLTDIMKERLSAPGKKYGDLVDLIVEELQSEKPMIDENFAIDALAALLFTSFATLSSTLTVAFKYLTDNPKVVEELKEEHGTILKKREGVNSGFTWEEYRSLKFSTQVMNEITRISNVTPGVFRKTLTDVQVKGYTIPSGWLVMISPMAVHLNPKLFEDPLKFDPWRWREEKRSSMLKNYMPFGGGVRLCLGAEFSKLFIALFLHILVTEYSWTEIEGGEVLRISEIMFPQGYHIQLVPQT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0570500 | RBH | 0.0 | 0.0 | 2.210642 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g48200 | RBH | 0.0 | 0.0 | 0.498431 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0675400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0023510 | RBH | 0.0 | 0.0 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0024250 | RBH | 0.0 | 0.0 | 0.199900 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0023980 | RBH | 0.0 | 0.0 | 1.445291 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0023730 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0023870 | RBH | 0.0 | 0.0 | 5.113295 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0449900 | SBH | 0.815468 | 0.0396325 | 0.374478 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0022640 | RBH | 0.0 | 0.0 | 0.033752 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0453700 | RBH | 1.103369 | 0.005544 | 0.012879 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0023140 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0022970 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0023090 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0023500 | RBH | 0.0 | 0.0 | 0.077800 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0023690 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G022930 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0022840 | RBH | 0.0 | 0.0 | 1.072739 |
