Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os04g0371100 | OGI:04058110 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr04:18061313-18064800 | ||||||||
| Gene Symbol | WAK47, OsWAK47, OsRLCK147, RLCK147 | ||||||||||
| DNA seq | ATTTTCTTTAGCGGGACGTACTACCAACAACATTATTTTCATCTATATATCCAGAACATAGCTACAAATGACAAATACAAAATTGGAATATAACATAAGCGCTCATTCAAACGACAACCATGTAGTACTTGTGAAATCATCTAGCAAATTCTATGCTCATTGCAGCCACGCTCCTAAGGCTGTTGTAGCCATTGGTTTCACCTGTGAAATGCAATGATGTGTCTGCAGATGAACTTGCTAACAATGACATTGAACTAATAGTTGTAAGTACCCCACGGTGTTGTCGTACTCGTTTTTCTATTCGTCGCAATTCCTCTGCAATCCTGCACATTGTTGGTCTGCTCTCACTAGTCATTGCTAAACACTGGCATGCCAGCCTTGCTAGATCACCAATCAATCCCATGTTATCCTCATGTAATATTTCTGTGTCTATGAGCTCAAGAAACAGGCCTTCCTTCATGGCCTCTTGAAATACTGATGCGAGGCTGACCTTCTGCTTAGATAATGGTGTACGGCGTGTTAAAAGCTCAAGAAGAACGACACCAAAGCTGTACACGTCACTCTTGTCAGTGAGCTCGAACTTCAGCAGGTACTCTGGATCTAGATAGCCAATCGTACCTTTCACCACGTCATCGTGTCCATCAGCTGCCCTAATTTTGGAGCACCCAAAATCAGAAATCTTTGCAATAAAATTGTTACTAAGCAGTATGTTCATCGACTTGACATCCCCATGTAAGATAGGGTGGTCCAGTGAGTGTAGATATGAAAATGCTTCAGCAGATTCGGCAGCAACTTTTAGGCGGATCTCCAGTGTTCTGATGGATGGATCATTTTGGCTGTGGATTAGATAGTGCAAAGTCTTATTGGGGACAAATTCGTACACAAGAACTGGAACTTCAAATTGCAGACAACAACCAAGAAGCTTGACGATGTTTTCATGGTTGACTCGAGAAAGTATGAGCAGCTCCTGTGTAAATTCTGTCCTACTATTCTCATCAAATCCCTTGCACTTTTTGATCGCAACAGGGTTGTTCACTTGATCAAGATTATACCCTTTAAAAACAGTACCCTGACCTCCTTCACCAATGATTGATGTCTTGTCAAAGCCTTTGGTGGCCAACTCAATGTCATCTCGGTCATACAGCTTAAATGAAATGTTGTTCTCTATGTTCATCATATCTGTTAACAATTGGCCTCCGTGTAGATGAAAATACTCGCCCCTCTTCCTCATGATGTCTTGCCTTTTGATTCGTTGTTTGTACTTGATCCATTCTATCCCAAGTAAAGTCGTTAGAGCAACCACAAGAGAGGCACAAATTCCTAGCGAGGAGAAGGTAAAAATGCTTAAGCCAAATATATATGTACAGGGAATTGTTCAAATGAATCAATGCAAAACATGAAATTCATAATTTATTCGAATATAGCAATCAGGCAAGGTTGAAAATTTTGTGTATACCGATAGCTAGCCCTTTGTCGCATGGTCCATTGTAGGCATTGCCTCGTGTACCAAACGGACAAGTACAATCATAACCTCCAACTTTATTTCTGCATTTTCCATGGCAGGGGTACTTATATGGTTCCTTGCACTCATCAATATCTGCAACAGAATACCAGCGGTATTAAGAAACGGAATTTAGCGTTGCTTTGTTAGAAAACAGAGCAATTCAAATCATGAGTATATAGTGTGTACATGTGAATGTGTATCCAAATGGACTTCCTAAAAAATGTTTTTTTAAAGATTACAAAATCTATGATTTAGAAATCAAAATATTTTCTAGGAAAATATTCTTATACTGCACCTTATAAGTTAAAGGCACATGGCAGATGCAATGGAAATAATTTAAGGTATGACTCTAAGCAATACAAAAGCAAGACTTTCGCAACATCTAAAAATTATCTCTAAACTTTAGCGCTATACATTATTATTCATCATTCAACTTTCTAATAAACAATTTAATTTACACCACTCGACATGAACGGCAAGGAGGCTCAAGGGACCCTAGCGATGCTTACGCTAGGAGGCAGAGGTGCAGGCACCTACGTTAACAGATGGGCGTGTTAGGACACGGGGGATCTGAGTAAAATCCGGGGAATTAACGCAAAAATTGTAAGTTGCCAGCAGGAGCCCTGGATTGTACTTGCATTAATTGGAAACACTGGTTGGCAGCAATTGCTTAGGGCTTGAGAAGGGTTTAGCAGTTACAGCTGAGAGGAGGGGGAAGGGCAAGAGAGGAAGGAAAAGGAATGAACAATCCAAAATTTTCTTTGCTGATTGTAATACCATATATAAGTGGCACCTAAGTTAAAATCGTCCGAGTTTTGGTTGAGGGATTTACAGGCTCAATCTAAAAGTTGATGGATGATTTTTACACATTCACGAAAGTTGATGTAAAATGAATTTTAATTTACGAACGTCCATCCTAAATTAACTCTAAAATTAGCTAGGTTAGAAAATATTTATAGTTAGCTAGAACTTACAAGCAGGTCCATCCTATGCGTACTACTTTAAGAACGTACGTATTGAATTCACATTAACTAGCCATAACCTTACGTGTTTTTTTATTCCATTTTAACTTGCTCAATAATAATGCCTTAATTAAAGGATGGGATTGTATTTAACTTCACCTTGGCAGCTGTCGGGATCTTCTGGTTTCAGGTAAGGATTTCCATGAAATCCTTGGGAGCAGTTGCATCTATAGCCTGGTCCATTGAGCGAGTCCACACACCCACTATTTTTGCTGATGCACGTGTAATACACGTGCTACATCACAGGTCTCATTTCCGATGGCCCAATCCACAAGCAGCGGCGCTCGCCCACGGTAATGATCATTGAACGATGAAGAAGTAGGGTAGTTCTTAGAGAAGTTGAAGCTGGATGCCTCCATGAGTGCCGCATAGCTGCAACGGCTCATGTTGTTGATCTCCGTCGTGTTGAAGCCCGAGTCAAACATGACCCCATAGTACTGTAGCCCCTTGGGGATGGCTGTCTGGCAGCAACCTATCCCGGAGCAGACACCGTCTGGGAGCCTCAAGAGGTCGTCTGCCTTGCATGTGGCCACACACCCGGTTGTTAACACATCGTCTGCTAAGAGGTAAGCGAGCGTTCGACACCCGATGGCCGTGAACTTGTTGCCGAAGTCGGATAATCTAAATGGTGTGCCCGTTAAGTTTAGCGACCAGCCCGTACCGTTCATCCCGCCAGAAGTACTATTGTAGCAATAGTTAGCTATGTGCATCCTCATTCGTACCTGACCTTCTGTCAGCGAGATGTTAAGCAGCTCCACGTCTTTGTAATACGGCTTGCCATCTCCTTTGATGTTGCAGGTGAGGTTGAAGCCGGGCAGGGCGCAGGCAGGATCCAGGCCGAACGGGTAAGGGATCTCTACCCCGCCGCAGCTTCTCACGCAGGTGGCTGCAGAGGCGGCCGAGCAATATGCCGCGATCCCTCCGCAGAGCCATAGTAGTGAAGCTAGCATGTGGAATGGCAT
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| CDS seq | ATGCCATTCCACATGCTAGCTTCACTACTATGGCTCTGCGGAGGGATCGCGGCATATTGCTCGGCCGCCTCTGCAGCCACCTGCGTGAGAAGCTGCGGCGGGGTAGAGATCCCTTACCCGTTCGGCCTGGATCCTGCCTGCGCCCTGCCCGGCTTCAACCTCACCTGCAACATCAAAGGAGATGGCAAGCCGTATTACAAAGACGTGGAGCTGCTTAACATCTCGCTGACAGAAGGTCAGGTACGAATGAGGATGCACATAGCTAACTATTGCTACAATAGTACTTCTGGCGGGATGAACGGTACGGGCTGGTCGCTAAACTTAACGGGCACACCATTTAGATTATCCGACTTCGGCAACAAGTTCACGGCCATCGGGTGTCGAACGCTCGCTTACCTCTTAGCAGACGATGTGTTAACAACCGGGTGTGTGGCCACATGCAAGGCAGACGACCTCTTGAGGCTCCCAGACGGTGTCTGCTCCGGGATAGGTTGCTGCCAGACAGCCATCCCCAAGGGGCTACAGTACTATGGGGTCATGTTTGACTCGGGCTTCAACACGACGGAGATCAACAACATGAGCCGTTGCAGCTATGCGGCACTCATGGAGGCATCCAGCTTCAACTTCTCTAAGAACTACCCTACTTCTTCATCGTTCAATGATCATTACCGTGGGCGAGCGCCGCTGCTTGTGGATTGGGCCATCGGAAATGAGACCTGTGATGTAGCACGTGTATTACACGTGCATCAGCAAAAATAG
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| Protein seq | MPFHMLASLLWLCGGIAAYCSAASAATCVRSCGGVEIPYPFGLDPACALPGFNLTCNIKGDGKPYYKDVELLNISLTEGQVRMRMHIANYCYNSTSGGMNGTGWSLNLTGTPFRLSDFGNKFTAIGCRTLAYLLADDVLTTGCVATCKADDLLRLPDGVCSGIGCCQTAIPKGLQYYGVMFDSGFNTTEINNMSRCSYAALMEASSFNFSKNYPTSSSFNDHYRGRAPLLVDWAIGNETCDVARVLHVHQQK |
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| Function | Wall-associated receptor kinase 2 [UniProtKB/Swiss-Prot:Q9LMP1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os04g0371100 | Os04t0371100-00 | Chr04 | 18061313 | 18064800 | - | irgsp1_rep | ||
| CDS seq | ATGCCATTCCACATGCTAGCTTCACTACTATGGCTCTGCGGAGGGATCGCGGCATATTGCTCGGCCGCCTCTGCAGCCACCTGCGTGAGAAGCTGCGGCGGGGTAGAGATCCCTTACCCGTTCGGCCTGGATCCTGCCTGCGCCCTGCCCGGCTTCAACCTCACCTGCAACATCAAAGGAGATGGCAAGCCGTATTACAAAGACGTGGAGCTGCTTAACATCTCGCTGACAGAAGGTCAGGTACGAATGAGGATGCACATAGCTAACTATTGCTACAATAGTACTTCTGGCGGGATGAACGGTACGGGCTGGTCGCTAAACTTAACGGGCACACCATTTAGATTATCCGACTTCGGCAACAAGTTCACGGCCATCGGGTGTCGAACGCTCGCTTACCTCTTAGCAGACGATGTGTTAACAACCGGGTGTGTGGCCACATGCAAGGCAGACGACCTCTTGAGGCTCCCAGACGGTGTCTGCTCCGGGATAGGTTGCTGCCAGACAGCCATCCCCAAGGGGCTACAGTACTATGGGGTCATGTTTGACTCGGGCTTCAACACGACGGAGATCAACAACATGAGCCGTTGCAGCTATGCGGCACTCATGGAGGCATCCAGCTTCAACTTCTCTAAGAACTACCCTACTTCTTCATCGTTCAATGATCATTACCGTGGGCGAGCGCCGCTGCTTGTGGATTGGGCCATCGGAAATGAGACCTGTGATGTAGCACGTGTATTACACGTGCATCAGCAAAAATAG
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| Protein seq | MPFHMLASLLWLCGGIAAYCSAASAATCVRSCGGVEIPYPFGLDPACALPGFNLTCNIKGDGKPYYKDVELLNISLTEGQVRMRMHIANYCYNSTSGGMNGTGWSLNLTGTPFRLSDFGNKFTAIGCRTLAYLLADDVLTTGCVATCKADDLLRLPDGVCSGIGCCQTAIPKGLQYYGVMFDSGFNTTEINNMSRCSYAALMEASSFNFSKNYPTSSSFNDHYRGRAPLLVDWAIGNETCDVARVLHVHQQK
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0371100 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g30260 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0369600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0010090 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0010860 | SBH | 0.0 | 0.242682 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0010610 | RBH | 0.164254 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0010250 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0010490 | RBH | 0.0 | 0.000000 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0293500 | SBH | 0.0107365 | 0.4744655 | 0.041634 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0009920 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0284500 | RBH | 0 | 1.3356895 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0010200 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0010110 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0010170 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0010670 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0010420 | RBH | 0.000000 | 0.255983 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G009550 | RBH | 0.057031 | 0.082531 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0009580 | SBH | 0.0 | 5.172986 | 0.0 |
