Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os04g0213800 | OGI:04025610 | 11/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr04:7620565-7621389 | ||||||||
| Gene Symbol | RLCK137, OsRLCK137 | ||||||||||
| DNA seq | TCAGTTGGCCTCTTTCCAGTGAATAACTCCAGAAGCATAATACCGTAGCTGAATGCATCGCTTTTCCGTGATGCTTTCCCAACTGACCCATACTCTGGCAATATTTTTTTCCAAACAGGAGAGGAATAAATTAGTAATAAAACTAATAATTGAATAAAAACGAGACAAATTAAAGAACATACTAGAAATACCTGGTGCCATATAACCAACTGTTCCAGGCATACTTGCAGAAATAACAGAGTTGTCGTCACCACATAACAGTTTTGCAATCCCGAAATCGGCCACCAATGCAACCATGTCTTGGTCGAATAGGACATTGCTAGGCTTCAAGTCGCAGTGTAGGACTACCTCACAGTGATGATAGTGAAGATACTCCATTGCCATAGACACATCCAACAGAATGTCCAGTCTCTGAAGGAATCCCAGTTGCTCTCCACCTTCAGAGTGTAGCTGTGTTTCTAAGCTTCCGTTGGGCATGTAGGGAAGAACCAAAGCTCTGAAATCCAGGCTAGAACATGTGGTGAGTATCCTAATCAAGTTGCGATGCCGGGCCATGCGCAGGGCATGACACTCCGAATCGAAGCTTCTCACAGCTTGTTCCAGCTCCATGTTGAGAACTTTTATTGCCACCATAGTACCGTCGTTCAGTTGGCCCTTGAAAACTTTTCCAAAGCTTCCAGCCCCCAAGAAGTTAGTCTCACTAAAATTATCCGTGGCTCGGACAATGTCATGGTAAGAGATCAACCTGTTGTTGAGCACATCTTCCATATCAGGAGAAATGATTCTATCTTCTTGCTTGGCTTTCTTCCTCATCATCATGTACAT
More
|
||||||||||
| CDS seq | ATGTACATGATGATGAGGAAGAAAGCCAAGCAAGAAGATAGAATCATTTCTCCTGATATGGAAGATGTGCTCAACAACAGGTTGATCTCTTACCATGACATTGTCCGAGCCACGGATAATTTTAGTGAGACTAACTTCTTGGGGGCTGGAAGCTTTGGAAAAGTTTTCAAGGGCCAACTGAACGACGGTACTATGGTGGCAATAAAAGTTCTCAACATGGAGCTGGAACAAGCTGTGAGAAGCTTCGATTCGGAGTGTCATGCCCTGCGCATGGCCCGGCATCGCAACTTGATTAGGATACTCACCACATGTTCTAGCCTGGATTTCAGAGCTTTGGTTCTTCCCTACATGCCCAACGGAAGCTTAGAAACACAGCTACACTCTGAAGGTGGAGAGCAACTGGGATTCCTTCAGAGACTGGACATTCTGTTGGATGTGTCTATGGCAATGGAGTATCTTCACTATCATCACTGTGAGGTAGTCCTACACTGCGACTTGAAGCCTAGCAATGTCCTATTCGACCAAGACATGGTTGCATTGGTGGCCGATTTCGGGATTGCAAAACTGTTATGTGGTGACGACAACTCTGTTATTTCTGCAAGTATGCCTGGAACAGTTGGTTATATGGCACCAGGTATTTCTAGTATGTTCTTTAATTTGTCTCGTTTTTATTCAATTATTAGTTTTATTACTAATTTATTCCTCTCCTGTTTGGAAAAAAATATTGCCAGAGTATGGGTCAGTTGGGAAAGCATCACGGAAAAGCGATGCATTCAGCTACGGTATTATGCTTCTGGAGTTATTCACTGGAAAGAGGCCAACTGA
More
|
||||||||||
| Protein seq | MYMMMRKKAKQEDRIISPDMEDVLNNRLISYHDIVRATDNFSETNFLGAGSFGKVFKGQLNDGTMVAIKVLNMELEQAVRSFDSECHALRMARHRNLIRILTTCSSLDFRALVLPYMPNGSLETQLHSEGGEQLGFLQRLDILLDVSMAMEYLHYHHCEVVLHCDLKPSNVLFDQDMVALVADFGIAKLLCGDDNSVISASMPGTVGYMAPGISSMFFNLSRFYSIISFITNLFLSCLEKNIARVWVSWESITEKRCIQLRYYASGVIHWKEAN |
||||||||||
| Function | Receptor kinase-like protein Xa21 [UniProtKB/Swiss-Prot:Q1MX30] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os04g0213800 | Os04t0213800-00 | Chr04 | 7620565 | 7621389 | - | irgsp1_rep | ||
| CDS seq | ATGTACATGATGATGAGGAAGAAAGCCAAGCAAGAAGATAGAATCATTTCTCCTGATATGGAAGATGTGCTCAACAACAGGTTGATCTCTTACCATGACATTGTCCGAGCCACGGATAATTTTAGTGAGACTAACTTCTTGGGGGCTGGAAGCTTTGGAAAAGTTTTCAAGGGCCAACTGAACGACGGTACTATGGTGGCAATAAAAGTTCTCAACATGGAGCTGGAACAAGCTGTGAGAAGCTTCGATTCGGAGTGTCATGCCCTGCGCATGGCCCGGCATCGCAACTTGATTAGGATACTCACCACATGTTCTAGCCTGGATTTCAGAGCTTTGGTTCTTCCCTACATGCCCAACGGAAGCTTAGAAACACAGCTACACTCTGAAGGTGGAGAGCAACTGGGATTCCTTCAGAGACTGGACATTCTGTTGGATGTGTCTATGGCAATGGAGTATCTTCACTATCATCACTGTGAGGTAGTCCTACACTGCGACTTGAAGCCTAGCAATGTCCTATTCGACCAAGACATGGTTGCATTGGTGGCCGATTTCGGGATTGCAAAACTGTTATGTGGTGACGACAACTCTGTTATTTCTGCAAGTATGCCTGGAACAGTTGGTTATATGGCACCAGGTATTTCTAGTATGTTCTTTAATTTGTCTCGTTTTTATTCAATTATTAGTTTTATTACTAATTTATTCCTCTCCTGTTTGGAAAAAAATATTGCCAGAGTATGGGTCAGTTGGGAAAGCATCACGGAAAAGCGATGCATTCAGCTACGGTATTATGCTTCTGGAGTTATTCACTGGAAAGAGGCCAACTGA
More
|
|||||||
| Protein seq | MYMMMRKKAKQEDRIISPDMEDVLNNRLISYHDIVRATDNFSETNFLGAGSFGKVFKGQLNDGTMVAIKVLNMELEQAVRSFDSECHALRMARHRNLIRILTTCSSLDFRALVLPYMPNGSLETQLHSEGGEQLGFLQRLDILLDVSMAMEYLHYHHCEVVLHCDLKPSNVLFDQDMVALVADFGIAKLLCGDDNSVISASMPGTVGYMAPGISSMFFNLSRFYSIISFITNLFLSCLEKNIARVWVSWESITEKRCIQLRYYASGVIHWKEAN
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0213800 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g13640 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0004500 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0005150 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0004690 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0004850 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0004740 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0115800 | RBH | 0 | 0.0109175 | 0.0407025 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0004070 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0107400 | SBH | 1.3508365 | 0.2893325 | 3.432165 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0001070 | SBH | 0.075250 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0004910 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0001160 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0004550 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0004820 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G001160 | SBH | 0.0 | 0.0 | 0.115396 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0001170 | SBH | 0.0 | 0.0 | 0.0 |
