Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os04g13640 | OGI:04025610 | 11/16 | Nipponbare | IRGSP 1.0 | MSU | Chr04:7620318-7621389 | ||||||||
| Gene Symbol | RLCK137, OsRLCK137 | ||||||||||
| DNA seq | TTAGACAGAAGCCATGTAATCCTTTTTTATCTTCGCCAGTCTCACAACCACTTCGCTCATTGTCATTCTTTGGTCTGGTAATTCATGTGAGCATAGTAATCCCAACTCAAAAACTGGGACTATAAAGTTATTCAATGAACTAGAAGAATCTTGCACCAGTAACTGGTTATCCACCACATCCATGACATTTGATGGAAATGCACTAGTAACCCACTGCCTTAGAGATAGTTCTCCAACAAACATGGGATCAGTTGGCCTCTTTCCAGTGAATAACTCCAGAAGCATAATACCGTAGCTGAATGCATCGCTTTTCCGTGATGCTTTCCCAACTGACCCATACTCTGGCAATATTTTTTTCCAAACAGGAGAGGAATAAATTAGTAATAAAACTAATAATTGAATAAAAACGAGACAAATTAAAGAACATACTAGAAATACCTGGTGCCATATAACCAACTGTTCCAGGCATACTTGCAGAAATAACAGAGTTGTCGTCACCACATAACAGTTTTGCAATCCCGAAATCGGCCACCAATGCAACCATGTCTTGGTCGAATAGGACATTGCTAGGCTTCAAGTCGCAGTGTAGGACTACCTCACAGTGATGATAGTGAAGATACTCCATTGCCATAGACACATCCAACAGAATGTCCAGTCTCTGAAGGAATCCCAGTTGCTCTCCACCTTCAGAGTGTAGCTGTGTTTCTAAGCTTCCGTTGGGCATGTAGGGAAGAACCAAAGCTCTGAAATCCAGGCTAGAACATGTGGTGAGTATCCTAATCAAGTTGCGATGCCGGGCCATGCGCAGGGCATGACACTCCGAATCGAAGCTTCTCACAGCTTGTTCCAGCTCCATGTTGAGAACTTTTATTGCCACCATAGTACCGTCGTTCAGTTGGCCCTTGAAAACTTTTCCAAAGCTTCCAGCCCCCAAGAAGTTAGTCTCACTAAAATTATCCGTGGCTCGGACAATGTCATGGTAAGAGATCAACCTGTTGTTGAGCACATCTTCCATATCAGGAGAAATGATTCTATCTTCTTGCTTGGCTTTCTTCCTCATCATCATGTACAT
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| CDS seq | ATGTACATGATGATGAGGAAGAAAGCCAAGCAAGAAGATAGAATCATTTCTCCTGATATGGAAGATGTGCTCAACAACAGGTTGATCTCTTACCATGACATTGTCCGAGCCACGGATAATTTTAGTGAGACTAACTTCTTGGGGGCTGGAAGCTTTGGAAAAGTTTTCAAGGGCCAACTGAACGACGGTACTATGGTGGCAATAAAAGTTCTCAACATGGAGCTGGAACAAGCTGTGAGAAGCTTCGATTCGGAGTGTCATGCCCTGCGCATGGCCCGGCATCGCAACTTGATTAGGATACTCACCACATGTTCTAGCCTGGATTTCAGAGCTTTGGTTCTTCCCTACATGCCCAACGGAAGCTTAGAAACACAGCTACACTCTGAAGGTGGAGAGCAACTGGGATTCCTTCAGAGACTGGACATTCTGTTGGATGTGTCTATGGCAATGGAGTATCTTCACTATCATCACTGTGAGGTAGTCCTACACTGCGACTTGAAGCCTAGCAATGTCCTATTCGACCAAGACATGGTTGCATTGGTGGCCGATTTCGGGATTGCAAAACTGTTATGTGGTGACGACAACTCTGTTATTTCTGCAAGTATGCCTGGAACAGTTGGTTATATGGCACCAGAGTATGGGTCAGTTGGGAAAGCATCACGGAAAAGCGATGCATTCAGCTACGGTATTATGCTTCTGGAGTTATTCACTGGAAAGAGGCCAACTGATCCCATGTTTGTTGGAGAACTATCTCTAAGGCAGTGGGTTACTAGTGCATTTCCATCAAATGTCATGGATGTGGTGGATAACCAGTTACTGGTGCAAGATTCTTCTAGTTCATTGAATAACTTTATAGTCCCAGTTTTTGAGTTGGGATTACTATGCTCACATGAATTACCAGACCAAAGAATGACAATGAGCGAAGTGGTTGTGAGACTGGCGAAGATAAAAAAGGATTACATGGCTTCTGTCTAA
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| Protein seq | MYMMMRKKAKQEDRIISPDMEDVLNNRLISYHDIVRATDNFSETNFLGAGSFGKVFKGQLNDGTMVAIKVLNMELEQAVRSFDSECHALRMARHRNLIRILTTCSSLDFRALVLPYMPNGSLETQLHSEGGEQLGFLQRLDILLDVSMAMEYLHYHHCEVVLHCDLKPSNVLFDQDMVALVADFGIAKLLCGDDNSVISASMPGTVGYMAPEYGSVGKASRKSDAFSYGIMLLELFTGKRPTDPMFVGELSLRQWVTSAFPSNVMDVVDNQLLVQDSSSSLNNFIVPVFELGLLCSHELPDQRMTMSEVVVRLAKIKKDYMASV |
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| Function | Receptor kinase-like protein Xa21 [UniProtKB/Swiss-Prot:Q1MX30] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os04g13640 | LOC_Os04g13640.1 | Chr04 | 7620318 | 7621389 | - | MSU_osa1r7 | ||
| CDS seq | ATGTACATGATGATGAGGAAGAAAGCCAAGCAAGAAGATAGAATCATTTCTCCTGATATGGAAGATGTGCTCAACAACAGGTTGATCTCTTACCATGACATTGTCCGAGCCACGGATAATTTTAGTGAGACTAACTTCTTGGGGGCTGGAAGCTTTGGAAAAGTTTTCAAGGGCCAACTGAACGACGGTACTATGGTGGCAATAAAAGTTCTCAACATGGAGCTGGAACAAGCTGTGAGAAGCTTCGATTCGGAGTGTCATGCCCTGCGCATGGCCCGGCATCGCAACTTGATTAGGATACTCACCACATGTTCTAGCCTGGATTTCAGAGCTTTGGTTCTTCCCTACATGCCCAACGGAAGCTTAGAAACACAGCTACACTCTGAAGGTGGAGAGCAACTGGGATTCCTTCAGAGACTGGACATTCTGTTGGATGTGTCTATGGCAATGGAGTATCTTCACTATCATCACTGTGAGGTAGTCCTACACTGCGACTTGAAGCCTAGCAATGTCCTATTCGACCAAGACATGGTTGCATTGGTGGCCGATTTCGGGATTGCAAAACTGTTATGTGGTGACGACAACTCTGTTATTTCTGCAAGTATGCCTGGAACAGTTGGTTATATGGCACCAGAGTATGGGTCAGTTGGGAAAGCATCACGGAAAAGCGATGCATTCAGCTACGGTATTATGCTTCTGGAGTTATTCACTGGAAAGAGGCCAACTGATCCCATGTTTGTTGGAGAACTATCTCTAAGGCAGTGGGTTACTAGTGCATTTCCATCAAATGTCATGGATGTGGTGGATAACCAGTTACTGGTGCAAGATTCTTCTAGTTCATTGAATAACTTTATAGTCCCAGTTTTTGAGTTGGGATTACTATGCTCACATGAATTACCAGACCAAAGAATGACAATGAGCGAAGTGGTTGTGAGACTGGCGAAGATAAAAAAGGATTACATGGCTTCTGTCTAA
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| Protein seq | MYMMMRKKAKQEDRIISPDMEDVLNNRLISYHDIVRATDNFSETNFLGAGSFGKVFKGQLNDGTMVAIKVLNMELEQAVRSFDSECHALRMARHRNLIRILTTCSSLDFRALVLPYMPNGSLETQLHSEGGEQLGFLQRLDILLDVSMAMEYLHYHHCEVVLHCDLKPSNVLFDQDMVALVADFGIAKLLCGDDNSVISASMPGTVGYMAPEYGSVGKASRKSDAFSYGIMLLELFTGKRPTDPMFVGELSLRQWVTSAFPSNVMDVVDNQLLVQDSSSSLNNFIVPVFELGLLCSHELPDQRMTMSEVVVRLAKIKKDYMASV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0213800 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g16740 | SBH | 0.654236 | 0.810010 | 0.413951 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0213800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0004500 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0005150 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0004690 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0004850 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0004740 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0444200 | SBH | 0.024749 | 0.065174 | 0.025844 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0024800 | SBH | 0.009890 | 0.000000 | 0.012598 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0168600 | SBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0024650 | SBH | 0.008922 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0024760 | SBH | 0.027641 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0024040 | SBH | 0.000000 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0004550 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0004820 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
